Array 1 686-149 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHL010000206.1 Caldibacillus sp. 210928-DFI.2.18 BBFOIJEK_206, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 685 36 100.0 36 .................................... GGCGTAAGTATGGGTGCTATTGCAGCTCCAGTATTA 613 36 100.0 37 .................................... TTTAAAATGCGATAGTGATAAAAAATTGTCGAATCTG 540 36 100.0 38 .................................... CTTTAATAACTCGTTTGTGACCACCTAGATCACCCCTC 466 36 100.0 38 .................................... AAACCCGCAAAAAATAAGCTGTTGACGAGTCTAGTTAG 392 36 97.2 39 ......................C............. TTGTCAATCCTCGAAAATGCCGGGCGGACGGGCTTGCCA 317 36 94.4 35 ....................A.C............. CCACCACCGACGGCGTCCACGCCAATTGCCTGCTT 246 36 97.2 26 ......................C............. AACAATATAAACGACTACTTTACCGT Deletion [185] 184 36 97.2 0 ..T................................. | ========== ====== ====== ====== ==================================== ======================================= ================== 8 36 98.3 36 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : TTTTTTTATGGTGTTTAT # Right flank : CGATGGGATGGGAGAGAGAGGACAGTTCTACTCTTGCTGTATCCAGCTTCTTTTACTTTATCCGGTATCATTTCTTCACTTCTTTCTGCACATAAAAAAGCACCTAACTATTTGGATAAGTTAAGTGCTTTTATTTCCGTTTGAAGTTG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : GTCCAAGAAAAAAGAAATGATACGAGGCATTAGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 6119-5088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHL010000116.1 Caldibacillus sp. 210928-DFI.2.18 BBFOIJEK_116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 6118 30 100.0 35 .............................. AGTCCCGTAAAAATGGGCTTAAGTTTTCTAGCTCT 6053 30 100.0 35 .............................. TCGCCTTGCATGACGCACAATGTTCGCTCATAAGT 5988 30 100.0 38 .............................. TCGTGTATATCCTTTACTTCACTTTTTGCGTACCGCAC 5920 30 100.0 38 .............................. ACAAGAATACCATAATCTGCTAGTCCATTTGCATCTAT 5852 30 100.0 39 .............................. GCTAAATCTTGCTGGGATTGCGAAAACCCCATACTTTGT 5783 30 100.0 37 .............................. CTCCAATATTTAGCATACCAAAACCGTTCGATGAGCC 5716 30 100.0 36 .............................. GACAAAGAATATGAAGTGGATTATGAGATTAATAAC 5650 30 100.0 36 .............................. TTTGGAACCAACATTCACCCCAGAGGAAGCTTTATC 5584 30 100.0 37 .............................. ATGCTTCATCTTTGAACCGCTTTATTGATTCGTCAGA 5517 30 100.0 36 .............................. CTAGATTGTTAAATTTTTGATTGCTTCCATTATCAG 5451 30 100.0 37 .............................. AAGTCTAGTATTTTCCCCGTCGACGGCTGTTCTTTTA 5384 30 100.0 38 .............................. GGAGCAATCATAAATGGCAAAAAGTATTACTTATTAAT 5316 30 96.7 38 .............................T AAGCCCATACTCACAGGCACACTTACGGTTGTTGTAAA 5248 30 96.7 35 .............................T TCTATAACGGATACAGGAATCACATCGCTTTTAAA 5183 30 100.0 36 .............................. TCATCTGTAATGCTGCCGGCTTTTTTTCCTTGACTC 5117 30 93.3 0 ...................A........G. | ========== ====== ====== ====== ============================== ======================================= ================== 16 30 99.2 37 GTTTATATCTTACCTATGAGGAATTGAAAC # Left flank : TTCTCGGTTTTGTTGACTCTTCTGTCCTATTGGTGGTAATGATTGCTGGTTCACCTAATAATTTACCCTATTATTTGAAAGTTTTTATTGGATGTCAGGATGATAGAAGCCTTTTGCATTCATCAGGTGAAAAAAGTTGGATCTCCTGTTGCCCCATCAATAATGACGAGATTAGTATTTGGGATTTTTTTAAAACGTGTATGGAATTTACGAGATATTTCTCTGTTTTTGCGGAATGGACCAGTTCTTTCATTGAGAAAAACATCACGTTGTATTCTTGACAAAATGTAATTGGACTAGTGGAAAATTTTTGTCGTCGACCTCCAGTAGTGTACAAACCCCGGGGGATCGACGACAAGTTATTTTGAAAAATAATCAATAGAAAATGCCTAGATTACGTGTATTTATGGAAAATATAATTGCTAGAAAGCCAAATTTTTATTATAATTAACACAAAACCACCAATACAAAAAAACCTTATTAAATCAAGGATTGTTTGG # Right flank : TGCTTGAGCAAGATATTCTCGAATCACGGATATGGTTAAAGTTGCCAAGAACATATAGAACTGAGGTCACTGATAACAAGGTTCACACCCATATAAGATGGTTGACCACAAAGAACCACTTGAATATAGGTACTTTGCCAAACTATTTCATAATATTATTATACGTTTCATAAAAGAAAGACATTAATGGTTCAATGATGCCTTCATTAATATGATTATTTCCTGAACTGGCAATGATTTTATGAAACTCTTTATCTAATTCATCATAATTGTCAACATTATTTCTCATCGCATCTATCGACTTTTTTAAACTTTTTTAAACTTTTCAGTTCAGTTTCTGTTATTTTTTCTGCTGCTAATGTGACAAATCCGAGTTCCTGTGCCATTCGTGTTTCCATTAGAATATTTATATCCGTTGCAGTAATAGCATCAAATGATATGGGCGCGTACCTATTTTATGAGATATAAAGGTCCCTTCTTTTGTTCTTCTTTCAATCACT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 212-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHL010000306.1 Caldibacillus sp. 210928-DFI.2.18 BBFOIJEK_309, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================ ================== 211 24 95.8 27 ...........T............ AGTCTCATTTTTGACGACGAGACCCGT G [190] 159 24 100.0 28 ........................ ACTGCTCTATTTTGGCGACGAAACTCAA 107 24 83.3 28 ...............TG..C..G. GATGCTTGTTTTTGACGACGAGACCTAT 55 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================ ================== 4 24 94.8 28 TCTCGTCACCAATTTGAGGTGAAA # Left flank : GAGGGCGA # Right flank : AACTGCTCTATTTTGGCGACGAAACCCAATCT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTCGTCACCAATTTGAGGTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 2745-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHL010000017.1 Caldibacillus sp. 210928-DFI.2.18 BBFOIJEK_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2744 36 97.2 34 ..........T......................... AAAGTAATGAAGGGCAAAAATTATTTCAGGCTTT 2674 36 97.2 34 ..........T......................... ATAATCTTTTTGTTACTTGCCCACTTTACGAAAT 2604 36 100.0 38 .................................... AAATAATATCGAATAGTAATAATACAAAGACATCAAAT 2530 36 100.0 36 .................................... TTGCGCCGTTTTTGCGGTGCAAATAAAACTGATCCA 2458 36 100.0 35 .................................... TAACCATATTAGCGGTATTGTAGGAGGGATATTAT 2387 36 100.0 36 .................................... AATTTCTCACTAATTTTATAGGCAATATCAAATGTT 2315 36 100.0 35 .................................... TCAATAAACCATTCAAGCATGCGATTCCCTCCTAT 2244 36 100.0 35 .................................... CATTGAGTTTGTCCTTTAGAATTTGTCCACTTAAA 2173 36 100.0 35 .................................... ATTGTTGCAGCTATACCTCTACCAATCGCACCTAA 2102 36 100.0 36 .................................... TATTTTAAACCTTATTCTGTTTTTATTCCGTATTCG 2030 36 100.0 37 .................................... TTGATAAATTCCAATTCTATCGGATAAATGAAATTAT 1957 36 100.0 36 .................................... AATTACAGTGAAAAAACATCAAAATATGGAGTTATT 1885 36 100.0 38 .................................... TAAATAAATCCGATTTTTATTCTTCAATATCCACTTTA 1811 36 100.0 36 .................................... TTCATAAGATTCATATTCTCTGCAACCTTGTCCCGT 1739 36 100.0 37 .................................... CTAAAACTGAATTTATGAGTAAGCAGGAGCGGGGGGC 1666 36 100.0 37 .................................... TTGATACTATCAATTTTTGTTTCTAACACTTGCCTAC 1593 36 100.0 39 .................................... TCATACTCAAATCGCCTCCGATAAGTTCGTTATGCTTGC 1518 36 100.0 37 .................................... GATAAATATACGTTCATAGACGAAAAAAGTTTCACTT 1445 36 100.0 39 .................................... GTTCAAAAACTAGCCAAACGTTACTACCTTGATGAAGAT 1370 36 100.0 36 .................................... CGATGGCCTCAACGTCCCTGCGATATTCGCCTTGCT 1298 36 100.0 36 .................................... TCATTCTTAACACCTTTTCCATCCAATGGATTGAAA 1226 36 100.0 37 .................................... TTGGTCTAATATATGCTACTAGGTCACTTATGGGTGG 1153 36 100.0 36 .................................... AACAAAAAACAATTGATGAAGTATTTCAGCATGCAA 1081 36 100.0 37 .................................... GTTCCCCTCAAAGTGAGTCACCCGATTATGGTTCGGA 1008 36 100.0 37 .................................... CTTGTACTAGGCCCGGAACAAGAGGACGGTAAAAGAC 935 36 100.0 39 .................................... CATCCTGTAAGTCCTTTGTTTTTTGCCTTAAGTCCGCCT 860 36 100.0 39 .................................... AGCAAAGGAAGCACGAATATATAATAAACTTCTTCGAGA 785 36 100.0 38 .................................... AGCTTCTTGTTCTATCGTACTAAAAGTAGGGATGGTAC 711 36 100.0 37 .................................... TTAAAGCGATAGCAAAGTATTCGCTAACCTTTCCTCC 638 36 100.0 36 .................................... CTAGCAAAGGCTTACGCCAAGTATTTAAAAGAGCAA 566 36 100.0 35 .................................... TAGTCACTATGTATATTATATGATTGATATTCGCA 495 36 100.0 40 .................................... TGTCCTGCATTTTCTTCGCGCCTCCTTTTTCAAAGTCTAC 419 36 100.0 38 .................................... CACTAAAGCAGAAACACTATCTGGAATTGAAAAATTTA 345 36 100.0 37 .................................... TGAGAAACACGAGTATTTAATCTAACAGGTTTACTCA 272 36 100.0 37 .................................... CATTAGACAATTGCATATTACCTGAACAAAATACAAC 199 36 100.0 36 .................................... TGAGCATTATGATGAAAATGAAAGCTGGCATGATAT 127 36 100.0 37 .................................... TAATCACCCTTCATTGTTTTTTTTTATGGTGTTTATT 54 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 38 36 99.9 37 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : CCATCATAAGAATGACCAAGTAATGTTTGTTCACATCGGGCCAGTGAAAGATGGTCAACTATCTAAAAAAATCTCAACAATTGGGAAAGAATTTGTTCCAATGGATTTAAAGCGGCTTATATTTTGAAAAGATATAGCAAAGAAATCTTATGAAAAAAATAGAAAAATATATTGTTAAAAAATAGGGAATATTATATAATGGACTTACGAGGTTCTGTCTTTTGGTCAGGACAACCGTCTAGCTATAAGTGCTGCAGGGGTGTGAGAAACTCCTATTGCTGGACGATGTCTCTTTTATTTCTTTTTTCTTGGATCTGAGTACGAGCACCCACATTGGACATTTCGCATGGTGGGTGCTCGAACTATAGGTAAAACAAACCTTTTTAAGAAGAATACAAAAATAACTACAATATTTTTTAAAAGGAATTTTGATGGATTTACATAACCTCTCGCAACATGCTTCTAAAACCCAAGCCCACCATAGCCCAAAACCCCCTGCG # Right flank : CTAATCACCCTTCATTGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //