Array 1 15973-17329 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUWN010000012.1 Lactobacillus jensenii strain UMB0836 NODE_12_length_44990_cov_27.591980, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15973 36 100.0 30 .................................... CTGGTTACCTGTCCAATAGCCAGTTTTAGA 16039 36 100.0 30 .................................... AATTAAAATTGTAATCAGGATAATAAATTA 16105 36 100.0 30 .................................... CATGCTTACGCATTCCGCGCTACGCTTGGC 16171 36 100.0 30 .................................... GAGCCGGCTTATAGAAAGTATCAAATGAAA 16237 36 100.0 30 .................................... TAAAAACGGCAAAAGAAAAGCACCCCCGAA 16303 36 100.0 30 .................................... TGGTAAAAAGATTGAGGTTACTAAAGACTT 16369 36 100.0 30 .................................... TTGAATCAGCAAGTGAATAGGATCCATCTG 16435 36 100.0 30 .................................... TCTTGATTTCACGAGTTAACATTGGTTGAT 16501 36 100.0 30 .................................... ATTAGGATACTGTGTAGGATATACCTTCCA 16567 36 100.0 30 .................................... TTGTAAAATTTGTGATAATGATTTTCGTGT 16633 36 100.0 31 .................................... TGTTGCAAGCGCCGACCCTTATGGTGGGTAT 16700 36 100.0 30 .................................... AGTAGCTCAACAACTTCAAAGCGAAGTGGG 16766 36 100.0 30 .................................... TGTTTAAAGTAGTAAACAAGACTATTGAGC 16832 36 100.0 30 .................................... CTCTATTTTAATCTGCATACATACATGTAA 16898 36 100.0 30 .................................... AAGACAATACGTAATAAGGATATTGCACAA 16964 36 100.0 30 .................................... AATATATCAAGCCTGAAGCATTAGATGGCT 17030 36 100.0 30 .................................... CTAAAGCTTTTTCAGCATCATTTTTAGTGT 17096 36 100.0 30 .................................... GGCTAAAGACAATAAGATTAATGTTTCTAA 17162 36 100.0 30 .................................... ACTACCAGAATGGGCAGTTGCAGAAAAGAT 17228 36 100.0 30 .................................... AAAAGTAGTCGATGAATATTTAAGGTTAGT 17294 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.9 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCATTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG # Right flank : AGTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //