Array 1 84728-91282 **** Predicted by CRISPRDetect 2.4 *** >NZ_VORV01000003.1 Algoriphagus ratkowskyi strain IC026 NODE_3_length_415506_cov_134.367, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 84728 30 100.0 36 .............................. AGATTCTAACGATTACTACCAACGCACCCGACCAGC 84794 30 100.0 35 .............................. TGTAGTGGATGCAAGAACTTGCTTGCCTAAAGGCC 84859 30 100.0 36 .............................. TAGTGGGCTCAGGGTACTATACCGGGGGATTTACTG 84925 30 100.0 36 .............................. TCAAAATGTATAACAGGGACCTCCAGTATATTCTCA 84991 30 100.0 36 .............................. CAGGGGACCCCTACGCAGACGAAGCAGCACTCTTCG 85057 30 100.0 36 .............................. ATGTTTACACCAGCGGAAAAAACTTTGCAGGACAAG 85123 30 100.0 36 .............................. TGAGATGAGCGCAGCTATTACGCTGTCAGTCGAAGC 85189 30 100.0 35 .............................. TTGTCTCAAGCAGGGCTGAAACCTAACCGACTAAC 85254 30 100.0 35 .............................. CTGAGTCATTTATGAACAGGATTAAACTTAGATCT 85319 30 100.0 36 .............................. TTACTTCAAAGATGTAATTATGAGTGTCGGTATGAA 85385 30 100.0 36 .............................. ATGACTCTGACATGCAAGGTTTAATTATCAGAATAG 85451 30 100.0 36 .............................. ATTTCAGAGGGTCAGATATTAGACGGTTTTGCGATA 85517 30 100.0 35 .............................. CATAGATATGTGCGTACGCATCGCTCGCGAGAATA 85582 30 100.0 36 .............................. TCTCGATCACAGTTGTGTCGAGCTCTTCTACACCGG 85648 30 100.0 36 .............................. CAGTGATCGCAGCTTCTACCAGAGCGGTAGCGTTTG 85714 30 100.0 36 .............................. GAGGCGAAGACTTACTTCGACACCTTCCAGTTTGAA 85780 30 100.0 36 .............................. ATGGATCAACCTTGGTAGGGAGCTCAATATCCAACT 85846 30 100.0 36 .............................. CAGGATGAGATTCCAGGGAATGCCCCATAGGACATA 85912 30 100.0 36 .............................. TGCAGTTCTGTTGAGCTTTTGCCTTTGTAGAACCCA 85978 30 100.0 35 .............................. GAGCAGGGAAGTGCAGCACATTGGAGGGATAAGTA 86043 30 100.0 36 .............................. TAATTACCCAAAAGTGCCCCTTAATAGGGAAGCTGA 86109 30 100.0 35 .............................. TGAATAACTAGGCTTAGTCTTCGCCTTCAGTTGGA 86174 30 100.0 36 .............................. CATCATGAGTGAACCTCGCTTAGGCTCCCGCTTTTT 86240 30 100.0 36 .............................. AGATGAGATTCATTAACACCATTTTCATACACTGCA 86306 30 100.0 36 .............................. CTGGAACAAGATTAGGATCTGAGCATCAGCCAGAAG 86372 30 100.0 36 .............................. AAGTAGGCAAAAGCTACCTCCCTTGGGCACCCAAAT 86438 30 100.0 35 .............................. TCATGCAGCACACGGTACAGGAGCTAAACATCTTG 86503 30 100.0 36 .............................. CTAAAGTGGCTGTGTCGTACTCGGTTTTTAGCCAGG 86569 30 100.0 36 .............................. TATACTGGCGCTGTGGCATCTTGATGGTGTAGGCTT 86635 30 100.0 36 .............................. CGGAGTCACAGTCAAATTAACGACCGTTGGATTCTC 86701 30 100.0 36 .............................. TACGAAAAGGACGAAGAAGGGAAAGACATCACGCAT 86767 30 100.0 36 .............................. AGAGTTGTGGTTGGAAGCAACATTACAGGATCTTAT 86833 30 100.0 36 .............................. TATTATGAAAACATATAAAGATGTTTATGAATTACC 86899 30 100.0 36 .............................. TGAAGAACTACTTCGGACTGAAATACGATTTCAACA 86965 30 100.0 35 .............................. GCAGATAAAGATCGTGAGTTCACGCATGTAATCGC 87030 30 100.0 37 .............................. CATTCCAGCTACAGCTTGGGAGAAGCCTTACAAGATT 87097 30 100.0 36 .............................. GAGTTTAACTACTTCTTTCAATTGATGAATGAAAGG 87163 30 100.0 37 .............................. CTGGAAGGGTTGAAATTAGAGGCGTAGGAACTGGCAC 87230 30 100.0 37 .............................. CAAACTCCACCCCCTCCCATTCATCAAATTTAGGCTT 87297 30 96.7 36 .....................G........ TATTTTATTCTCTTTCCTGAGCCTAGAAACTACTTT 87363 30 100.0 36 .............................. TGGATGGCGTGCTATTCCATGAGAAGAGTAAATGGG 87429 30 100.0 36 .............................. GTACATCAGCTACTTGCTGCGCTATCCAGAGATGCC 87495 30 100.0 36 .............................. TGAGCTGGTCGGCCTTTTCCTTGCTTTTCAGGATGG 87561 30 100.0 36 .............................. TTGAGACGTTTGGATGCAATGTGTCTAGAAGCTATT 87627 30 100.0 36 .............................. GAAGCTCCACACTACAGGAGAACTTAACGTGGACAC 87693 30 100.0 35 .............................. AGTGGATCATCGAAGGATTGCCAGGCTTTGTCTTT 87758 30 100.0 36 .............................. ACGCTTGACCAGATGAATACTTATTTGGCAAACAAC 87824 30 100.0 36 .............................. ATATTTATTGATGGCCTAGCCGTCAGCATGAACCAA 87890 30 100.0 36 .............................. TTTCCTGACAGATAAGAGGTTTTGGAATTGTCTGGA 87956 30 100.0 37 .............................. CGCCTTTGTCAGTTGTACTACCTCAATTGGCTACAAA 88023 30 100.0 36 .............................. GATATTGAGCAAGTAGAACAAGCAACGGATGTGCTT 88089 30 100.0 37 .............................. AACAGTAAAGAATTTGTATGCGGTATTTTCAGCCCCA 88156 30 100.0 37 .............................. ATAGAATCAAGTCCGACGGTAAGCCACTGCGACCTGG 88223 30 100.0 36 .............................. ACTCATATAGCAATCCTAGACGAGGCGCAAATCAGA 88289 30 100.0 36 .............................. AAAGGAGATCATTATTAGGAAGGATGTTGGTTTTGA 88355 30 100.0 36 .............................. CCACGAAAGCGCAAGACGTGGCGCAAAAACAGGAAC 88421 30 100.0 36 .............................. GTGGCTCTTTGCTCCGAACCGATTCGTAATTGACCT 88487 30 100.0 37 .............................. TCAGGAGAAAAAGAACTCAAACCGTAGAGGAAAGTCT 88554 30 100.0 35 .............................. CCGATCCAGTTGATCCTATCGAGCCACCAATTGAG 88619 30 100.0 36 .............................. CTAGAAACACCCGCTTTTCCCCTATTTTCTCAAATA 88685 30 100.0 36 .............................. CTGCAATCAATGTAGAGTTGCCACCTAATCCAAAGA 88751 30 100.0 36 .............................. CTGAGCGTAGATGTCTCGACCGTCAGAGCCTGTGCT 88817 30 100.0 36 .............................. GAAATTAAGGATATCATCCTTGGTTAATTTAGATTT 88883 30 100.0 35 .............................. TGGCTATCTGATTATAGTTTGATAAATAATTTCTC 88948 30 100.0 36 .............................. TCGTCAACCATGTGACAGCCCCGTGTATGCTTAAAA 89014 30 100.0 36 .............................. ATTCAACCAATCGATCTGCCAGTGCATCTGGCGTAG 89080 30 100.0 36 .............................. GGAACTCATCATGAAACAGGTGATGAAAGATCCCAA 89146 30 100.0 36 .............................. TTTCCTCTGCATTGTCAAAGGGACAATCTTCTGTAT 89212 30 100.0 36 .............................. CTACGAGGGACACCGCTACCAAGTAGGTGATCGCTA 89278 30 100.0 36 .............................. TATAGTACAGCTGCTAAGGAGGCGGCATTGAATCTT 89344 30 100.0 35 .............................. TGTCGAGTCCGATATTCCAGGACTTCATGTCCATA 89409 30 100.0 35 .............................. CTGTATGTCATGACTACTAAGGGTATTTGGGCACT 89474 30 100.0 36 .............................. AGTAGTAGTCCAATCTTCCTGAAAACTCCGCTATGT 89540 30 100.0 36 .............................. CGGATTGGATTATAGGTGTAAGCAGGATCTACAGTA 89606 30 100.0 36 .............................. TTAGGAAAAACACTAGACAAGCTGTGACTGCTGGTT 89672 30 96.7 36 ............T................. ACGAGTATGATGGATATGATTAGCAGATAAAAAAAC 89738 30 100.0 36 .............................. TGTACTGAGACAAGCTCCGGATGTGCAAATCAAACA 89804 30 100.0 36 .............................. GATACAGAAATAGCGGAATGCCCATGTCGATGTGGA 89870 30 100.0 37 .............................. AGAACATGCCCGGATATGCCTGATCAAATATCAGCCA 89937 30 100.0 36 .............................. CATTGTGTCCGAGTGGGAGTTCGTCCGAAGTGGGGA 90003 30 100.0 36 .............................. GCGCGAGATAGGCTGTGCCGGTGATCCATTGGGATA 90069 30 100.0 36 .............................. TGATTTGCTTCACGATGTCCAGGTTGCGCTGATTGT 90135 30 100.0 36 .............................. AAGTATAGTCATCCGGTGCTTCATTGAGCTGATCCA 90201 30 100.0 36 .............................. TGGGCTGCTGGGTAGATTGTTGGTTTTAGAACCCTC 90267 30 100.0 36 .............................. GACCTTATTTAGAGGATGTGATAGCAGGAGCAAATA 90333 30 100.0 36 .............................. GTTCCTGAGATATTAATAAACGAGGAATCAAAGTGT 90399 30 100.0 35 .............................. GGCAATTCCAGCGCATTCAACCAGCGCGCAAACGA 90464 30 100.0 37 .............................. AAACTAAGGAAGACACATGAGATACCTATGGACTCCA 90531 30 100.0 36 .............................. TGAATTTGAAGCTATCCAAAAGGCAATTTTAGAAAA 90597 30 100.0 36 .............................. CGAACTATCCATAGCCAAAGCCAAGATGTACAAGAT 90663 30 100.0 35 .............................. ATAATCAGGCAAATTGTTACTAAATTGGCATAATA 90728 30 100.0 35 .............................. ATGTAATCAGCGGAAATGATGGCCTTCTTGAAGTA 90793 30 100.0 36 .............................. GTAACTCCAAAGATTCTACACCATCACGGCTCCATA 90859 30 100.0 35 .............................. TCGATATCCGAATCGAGCGTGAAAACAAGGTTGTC 90924 30 96.7 36 T............................. TCAGGTCAGGATAATCATAGAAAAAGAACTTATAGC 90990 30 100.0 36 .............................. GATAAGAACCTGAACGGGAAAGTAGATAGCTGGGAG 91056 30 100.0 36 .............................. TCGAAGGAGGCGTCGATGAGGGGGAAGAGGGAGAGG 91122 30 93.3 35 .............A....T........... TCATCCAAGTGGATCAAGAACGATCAGCCCTATAC 91187 30 93.3 36 ..................TA.......... TGGGATCATCGGAAAGCTGGAGCATGAGATGTCTGA 91253 30 80.0 0 .................AT..C...T.G.T | ========== ====== ====== ====== ============================== ===================================== ================== 100 30 99.6 36 CCTTCAATCGCACCTTATCGGAATTGAAAC # Left flank : AACCATTCAAAATCTGGTGGTAATATGTATGTGATCTTGGTTTATGATATGGGAGAGAAGAGAGTAGGGAAAATGCTCAAGTTATGTCGGCAATACCTCAATTGGATTCAAAACTCTGTTTTTGAAGGGGAGATTACAGATGTAAAACTCAAGGAGTTGCTGATTAATACCAAAAAATTAATGCGGCAAGAGGAAGATAGTATCATTATCTTCAAAAGTCGGGATCAGAAGTGGCTTGAAAAAGAAGTTTATGGAAAAGAGAAAAACAGTCTTGACAACTTCCTTTAAGGTAATTGATTGTCGATAAGATGAAATTCTCAATAGAGATCAGCTAAATTTTGGAAGAAAATACAGAAATCCTTGAATACTCGCTGCAAAAGATGTTGTCGAACCCCAGGGTAAAATCGGGTACTTCACATCGACAACTTTTCCTTCTAAAAATTAGTAGAAAAACCTTCTTATTTTTAAAATTTGCCCTATTTTTGACTTTGGCCGAACGG # Right flank : TTATTAAATTGAATTTTGCCAGCTTCAAGAATAAGTCTCAAGGTGTCAATACTAGTGTAGTGATAAATCATAGAGTTTTTCTATCAAAATTCAGAACTTTCAAAGATTTTTACCAATCTTAATTTAGTCGATATATAATTTACGGCAGATGAAATATACCCTGTATAGGGTATATTTAAGATTGGAATTATCATTTTCTTAGCAGAAAATTAACGGTATTGTCAGAAGAGTAGCTTCCCTTTCTAAGGAAATTAGGAAATTTTCAAATCAAAGTTTAACCCTTAAAACCGAATGAAGGTCTTATTTACCTCAGTGATTTTCTTATTACTTCTATTCGTAAATACAAGATCCTTTGCTGCTGAGATCTATGAAGTCACGAGTGATGTTTTTGTCAGATCAGGAATAGGAACAAGCTATGAGGCAATAGGCATAGCGAAAGCGGGTGACCAAATTAATGTTCTTGATAAGTCAAACCCAAACTGGTTTAGGGTAGAATTTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATCGCACCTTATCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //