Array 1 97812-93823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKWO010000019.1 Klebsiella pneumoniae strain 154 contig_00020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 97811 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 97752 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 97691 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 97630 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 97569 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 97508 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 97447 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 97386 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 97325 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 97264 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 97203 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 97142 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 97081 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 97020 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 96959 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 96898 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 96837 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 96776 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 96715 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGTGGTTATAAAC 96654 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 96593 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 96532 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 96471 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 96410 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 96349 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 96288 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 96227 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 96166 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 96105 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 96044 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 95983 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 95922 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 95861 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 95800 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 95739 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 95678 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 95617 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95556 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 95495 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95434 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95373 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95312 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95251 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95190 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95129 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95068 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95007 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 94946 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 94885 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94824 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 94763 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94702 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94641 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 94580 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 94519 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 94458 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 94397 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 94336 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94275 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94214 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94153 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94092 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94031 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 93970 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 93909 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 93851 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //