Array 1 1180985-1181742 **** Predicted by CRISPRDetect 2.4 *** >NC_021030.1 Alistipes shahii WAL 8301, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1180985 36 100.0 29 .................................... TGAGTGGCCGAGCTTATGGCGAACTCGCT 1181050 36 100.0 29 .................................... ATCCCAGTAAGCAAGAAGAGTGTCGGCGT 1181115 36 100.0 30 .................................... ACAAGGCGAACGTATCAAGAGATCGCTGCT 1181181 36 100.0 29 .................................... GATATAGGAAAGCATGTATATCATTTATC 1181246 36 100.0 30 .................................... TCAGGCGACTCTTTTTGTGCCCTTGGGTAA 1181312 36 100.0 29 .................................... AACTCGTCCGGGATATTATACCGCGCCTT 1181377 36 100.0 30 .................................... CGATGATGCAACAGGTAACTGCGACGATTG 1181443 36 100.0 30 .................................... GGAATGCCGTGGATACAGGTCCATCGCCTT 1181509 36 100.0 30 .................................... GCGCCCCCTTACGTAATTGAACGGCTTGAA 1181575 36 100.0 30 .................................... GATGATCTACACGGAGAAGAGCAAAGGCGT 1181641 36 100.0 30 .................................... AGGATACTGCGTAAAATACGTAAGTAAGGT 1181707 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC # Left flank : AAAGATTGCATATCCTTTATTGGAGTAGTCGAATGTCAGAAGTACGCTTGAATGCTTATCGAATCATGTGGTTGTTTGTCTTTTTTGATTTGCCAACCAATACAAAAACGGAACGACGTCATGCGGCGCAATTTCGCAAGGCGTTGGAAAAAGATGGTTTCACAATGATGCAGTATTCAGTCTATGTGCGCCATTGTGCATCGAAGGAGAATATGCAGGTTCACATTAAGCGGGTTCGACGATCGATGCCTCCGACAGGATTTACAAGTATTCTTGCTGTAACGGACAAACAGTATGGAGACATATTAAATTTTTGGGGTAAAAGCGAACGAGCAAAACCGGAAATTCCGCAACAATTGGAATTTTTCTGATAAATCGTTATTTTCGTTCTTTGAAATACGGAAAATGCATCAAACTGGCTTCGTCGGAACACCCGATCGTATTTTTATAGTGGCAGACAGCCCGTAAGTAACACTTTATCAATCAATATGAGGCCCGAC # Right flank : CTCGGCCGTCCTTAACGGCAGCGCGAGGATAGTTGTGGTTTGATGTAGAATTTCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTTATGTATCACACTCTGTATCACAAACGGCGATTTCAAGGCATTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //