Array 1 1268820-1270647 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023439.1 Thauera sp. K11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1268820 28 100.0 32 ............................ AGGAAGGCCGCGATACGCGCCGGCGTCACGAT 1268880 28 100.0 32 ............................ TGCTTCAAGCAGGCGTTTTTTTTCGGCGAAGA 1268940 28 100.0 32 ............................ CGGTTCGTGTCCGACTCGTGCGCGTGCATACC 1269000 28 100.0 32 ............................ ACTTGCAGTCTGCCGCCCTGCTCCACTTCAGG 1269060 28 100.0 32 ............................ TTATCTGTCCTATTATTAGGACATCGGAAGGG 1269120 28 100.0 32 ............................ AATGCGCCGGCGGTCGTTGCGGCGGTGATTGC 1269180 28 100.0 32 ............................ TGTCACCATCGTGTTTGGTGACAGGTGGGGAT 1269240 28 100.0 32 ............................ TTGTCCATCAGGGTCTGCAATGGGCGAGGTTA 1269300 28 100.0 32 ............................ TTGCACGGCGGTTCTCGGCATTCCCCCGTATT 1269360 28 100.0 32 ............................ TGGTCGAGCATGTTTATATGTACTCGGATGGT 1269420 28 100.0 32 ............................ ACTGAAAAGACTGAGTAGAAAAGCCCCTAGAC 1269480 28 100.0 32 ............................ TATGTATGATGGTATTCGTAGGGTTCAGACGT 1269540 28 100.0 32 ............................ ATCGCCACCTGAGCCCCATCCGACAAACTTTC 1269600 28 100.0 32 ............................ TGGTCGCCGGTGCGGCCGACGAGTCGAAACCC 1269660 28 100.0 32 ............................ ACAGACGAAGGCTGCTTTACTGGCCGCTGCGA 1269720 28 100.0 32 ............................ ATTCGGAGAGCGACTGAGGTTCGCTCTGGCCC 1269780 28 100.0 32 ............................ AAGGCCGGCCGCAGGCGCCATCAGCAGGGTTC 1269840 28 100.0 32 ............................ TAACCCCCGGACGACATTCAAAACCCGTCGAA 1269900 28 100.0 32 ............................ ACCCGGGTTCGTCGTCGTCGTCGTCTGATTAT 1269960 28 100.0 32 ............................ ATTTCCTGAAAGGCATCAGTGACCGCCTTATC 1270020 28 100.0 32 ............................ GCGATCACTGCCGCCCCGATACATGCCAGGGC 1270080 28 100.0 32 ............................ TCTGTGCAGCCGCCGGCTTCTTTTTTGGAGCC 1270140 28 100.0 32 ............................ TGCTTGCGGGCGGGGATGGGCTGCGCAACAGG 1270200 28 100.0 32 ............................ AAAGACGAATGCCATACCCATCGCGAGAACAA 1270260 28 96.4 32 ........T................... GTAGCAAGTCCGCAACATCTCGTCACTCTCGG 1270320 28 100.0 32 ............................ TGGTTGAGTTCGAGTGTCGGCGCGCGCCGGGT 1270380 28 100.0 32 ............................ AACGCCTCGAACGCGGCGCCGAATGGTCCGAC 1270440 28 100.0 32 ............................ GAACAGATGCGGGACATTGGCGGCAGCGATCA 1270500 28 100.0 32 ............................ AACAAGGAACTCCGCGTCGTCGCTCAGTTGCA 1270560 28 100.0 32 ............................ AATTGGATGCGGTCGAGCAGCAGTGACTGCAT 1270620 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 31 28 99.9 32 GTTTGCCGCCGCGTAGGCGGTTGAGAAG # Left flank : AATGGGCGCGGGCGCTCTACGCCAGCCTGTCGGCGGGCTACGGCCTGCAGTTCACCCGCAACGAGGGCGCCGGTGCCCGGGCAAGCAAGGAGGATCGGATCAATTCCTTTCTCGACCACGGCAACTACATCGCCTACGGTCTCGCCGCAGTCGCCCTCAACGGACTCGGCATCAGCTACGCCTTCCCGCTCCTGCACGGCAAGACCCGCCGCGGCGCACTCGTGTTCGACATTGCAGACCTGATCAAGGACGCCTACGTGATGCCTCTGGCCTTCGAGTGCGGCGCAGATACTCGAATCAAAGACAATACCTTCCGTGCCCGCCTCATCGAGGTCTTGCAGGAAGCCGACGCATTGGATTTCCTGTTTGGCTTCGTCAAGACTCTGTCAGAGAAATATCCCTGAAATCATAGGCTTGGGGAAGCCGGATAAAATGAAGCCTGGAGCCTTCGCTGGTGCGTAAGGGGCTGTTTATAGGGGAGTTTGCGAAAGATTCGTTCA # Right flank : GTGGACCAGATAAAGGAGCAGAACGGGTTGAAGAGCCGAAACCAGACCATTGCACTGCTTATTGATCTAGCTTGGCAGAGCAGCAATACATGACTAAGCGTCAACTACCAGACTAGCGTTAATATCATTATGCTAACGAACATCTCCTTCCTGCTTTCTAAGAAGAGCCATGACAAGCTAAGTGACCTCTCACGAAGAGGAACTAAGACCTCAGCATTAATAGAGGCCATAGAAACCTACACGGATGACCAGCTAACCTACACACCTGCACGTACCACAAGCTTTAATCTGCCGCCAGAGATAATCTTTAAGCTTGACGAGATAAAGGCAAAGAACAATCTTAAGAGCAGGAATCAGACAGTAGAGATGCTCATAGATTTGCTATGGGCCAAGCACATTAAAGGCCCCTTATGAAGCCCAGACCCATTGCTATAGCCGCTATAGCCGTCACCGTAGTAGCCCTGCTATTGGTAGCTTTCAGGGCACCTATAAGAGTTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCGCCGCGTAGGCGGTTGAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1271586-1271911 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023439.1 Thauera sp. K11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 1271586 27 100.0 33 ........................... GAGGCGATGGATGGAGGTGTCGCCGCGAGCGCT 1271646 27 100.0 33 ........................... GAAGGGCGGGCGCAGCGGTGCGAGCAAGGTCGC 1271706 27 100.0 33 ........................... GTCGGTGCGGCCGAGTTCGTGCTGAGCTTTCGG 1271766 27 92.6 33 .....T...T................. GTTTCACGCGCTGGTGCGCCAGCTCGGGAACAT 1271826 27 92.6 33 ...........T.C............. CGGCGTAATCCGTACCGGAATGCCGCAGTACTT 1271886 26 77.8 0 .G.....A.....CC......A..-.. | ========== ====== ====== ====== =========================== ================================= ================== 6 27 93.8 33 GTTTGCCGCCGCGTAGGCGGTTGAGAA # Left flank : TATAGCCGTCACCGTAGTAGCCCTGCTATTGGTAGCTTTCAGGGCACCTATAAGAGTTGCAGTGACACGCTTGGCGGGTCCTGAAGAAGCCTGCCTAGACAGTCTTAGGTTGTCCTTGAAAGATCCTGACTCAGCAAAGGTAGTCTCAAACTTGAAAAGCAGGGGGCTTGATCTACCGGATGGCGCGTTCTTTCTAAGGTACAAGGCCACGAACTCATATGGAGCCTATGTATCTTCAAATACCATTTGTTCAGTGTCCTATAGCGGTGCCTATGAGGCAGGTGGGGTTCAAGAATCCATAGTGAGGACAGAGATCGGTAACTTATGTTTGCAAGCTCAACTTAGTCATCTCAGGGCAGGACAGGAATGGAAGCTAGGCGACTGTGATCACTTGGCGGACGCGGAGTTTAAAGGGATAGAAAACCTTCGGTGGCTTGTACAGCTCGGGCAATCAGACTAGGCCGTTTCACCGACACAGCCATCTCACTGGGCCATGTCAC # Right flank : ATCGGAATCGCTCTGCACGAAAACGTGTGGGCCAGGCCCGGTGCAGGCGCGTCACAACTAGGCTGCCGTATTGTCCGGACGCCGGTGCGATGAGGTCACGCCGCCCTGTTCGCGAAACGTCTTGCCAGCCTGTTGGCGCACAGTTCGAGCGTCGAGCACAGGATGAAATAGACCAGCGCCACGAACAGGAAGATCTCGGTGGGATAGACCATTTCCCGGTTGCTGACCTGGGTGGCGACGAAGGAGAGTTCGCCGACGCCGATGACGTAGGCGAGCGACGTATCCTTGATCAGGGCGACCCACTGGTTGATGAAGGAGGGCACCATGATCGGCAGCGCCTGCGGCAGGATCACCAGGCGCAGGGCCTGCCCCCGCCGGAATCCCAGCGCCGCCGCGGCCTGCCATTGCCCCGGCGGCAGGCTGAGGATTCCCGCATGCACCGAATGCGCCAGATAGCTGCCGCCGATCAGCGACAGCGCGACCACCACCGTGTCCACGCC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCGCCGCGTAGGCGGTTGAGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 2632509-2628006 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023439.1 Thauera sp. K11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2632508 32 100.0 34 ................................ AACCTTATCGAGCACGGCAAGCTGCGATTTGGTC 2632442 32 100.0 34 ................................ AGCGGAAGCGCAAGCAATTCACGCATGCCGATAT 2632376 32 100.0 34 ................................ ACTGGAGTAACTACCATGAATGCCATCGCTACCC 2632310 32 100.0 35 ................................ TGGCCGCCATTGACCCGCGCGGTGATGCGGTCGAA 2632243 32 100.0 34 ................................ GAGCGCACGGGCGGCTACCGGGTGGCGGACCTGC 2632177 32 100.0 36 ................................ GCGAGGCGCTCGTGCAGGTACAGCGACGTCAGTCCG 2632109 32 100.0 34 ................................ GGGCGCTGCTACGCGCACGGCGGCATCCTGGTGG 2632043 32 100.0 35 ................................ CGCCGGGGCGGTGCAAGCTGAAATCTTCAACTCTT 2631976 32 100.0 35 ................................ TGGATGCGCGCCCCAGCCTGATCCTGCAGGCACTG 2631909 32 100.0 35 ................................ AAGGAAGTCTGGTACTGGTCCGCCCAGCTCCACGA 2631842 32 100.0 34 ................................ TGGCCACCATTGACCCGCGCGGTGATGCGGTCGA 2631776 32 100.0 35 ................................ ACCAGCATCGCGGTGTCGTTCTATCCGCCCGAGGA 2631709 32 100.0 35 ................................ TTGAGTTCGGTGGTGACGCGGCTGGGGAAGTCGCG 2631642 32 100.0 36 ................................ ATTTTGGCCAATATGATTGGCGTTATCTGTTGCTCT 2631574 32 100.0 34 ................................ TCCTGCGCGCCGGCGATCGTGCATGGGTGATCGA 2631508 32 100.0 34 ................................ GCGCTCGACGGCGAGTGGATCGGGACCGACCTGC 2631442 32 100.0 35 ................................ CTGTCCGCGAAGATCGAGTGGATCGTAGCTGCTCA 2631375 32 100.0 35 ................................ AAGAAGGTCGCGAGTCGTTCGACCTAATCCTAATC 2631308 32 100.0 35 ................................ GTCGGCAGGCGCGCCGGTGTCGCTGTCGTTCTATT 2631241 32 100.0 35 ................................ TTTTATGCCCATACGCAGCAAGTCCAACGGCAACA 2631174 32 100.0 34 ................................ TCGACATGGTGCATGGCGTTGGCCGATGTCGATC 2631108 32 100.0 35 ................................ GCCGACCCGTCCGAGGCGCCAGCTATTGAAGTGGC 2631041 32 100.0 34 ................................ CACAGCCGGACGTATGCGCGATCGAGCAGCGTGC 2630975 32 100.0 35 ................................ TTCATGCTCGACGCCGGCGCGGTGGTGAGGCTCAG 2630908 32 100.0 33 ................................ CCAAGCGCAGAGAAACATTTCGCGCTGCCACAA 2630843 32 100.0 35 ................................ TTGACCACCGGCGCGACGGAGGTGTTGATGATGCG 2630776 32 100.0 35 ................................ TGCCCCTGAAACTGCGCTATCATTTGGTCACTGGG 2630709 32 100.0 35 ................................ AGTATCCCATTTGGTTGGCCGATTTAGGCCGTGAA 2630642 32 100.0 35 ................................ CAACCACCGGCCCAGTCGCCATCGAAAAAGAGCCG 2630575 32 100.0 37 ................................ GTTCTCATGATCACCTTCAAAACCCCCTCAACGTAAC 2630506 32 100.0 34 ................................ TATCTGCATTTGAAACACTTGCGCTCTGTTGGTG 2630440 32 100.0 36 ................................ TCGCAAGCTTGGATGGGACACGTACCTGATTGCCCA 2630372 32 100.0 34 ................................ CATCCGCGACCGCGTGCTGAACTGCCTCGGACGC 2630306 32 100.0 34 ................................ CATCGACCACTAACAATCCGGACGGCTCGACGAC 2630240 32 100.0 35 ................................ TGGCGTCGCCGGTCGGCAGTTGGGAGGAATTGCGG 2630173 32 100.0 34 ................................ CGTCAGTACTAGGCGTGCGCCCTCGCGTGCTGGG 2630107 32 100.0 33 ................................ CCTTGATCGAACTCTTGCGCAAGCTGCCTCCGG 2630042 32 100.0 34 ................................ TGATCGATTGGCTGACGCTCCGCCACCCCCTCGA 2629976 32 100.0 34 ................................ CTTGGCTTTGTGCGCCTCGGCTTGCGCCGCCTGC 2629910 32 100.0 35 ................................ TTGCTGCCACTCAAAAAAGCCAGGCCGCGCGACTA 2629843 32 100.0 34 ................................ CAGCGCGGGTTAGAAGTTGCTGTCCTGTTTCAAC 2629777 32 100.0 35 ................................ TTGCGGTAATCGGTGCCGACGAGGGAACGGAAATT 2629710 32 100.0 35 ................................ GCGCAGGACTGGTACTGGGGCAGCCAGCAGCTCGA 2629643 32 100.0 35 ................................ CGATGAGCTGGCCAAGATCGAAGGCGACCTGGCGT 2629576 32 100.0 35 ................................ GACTCGGGGCCAGGGTACAGATGCAGGGTGGCATC 2629509 32 100.0 36 ................................ CAGCGGGGCGACAACCGGCAGGGCTACACGGTTATG 2629441 32 100.0 35 ................................ CTCAGTCTTATCAATGCTACCGTCCGGATTCATTT 2629374 32 100.0 35 ................................ GAAGTTCCACTGAGCAATCGGCAAGCCGACACCTG 2629307 32 100.0 35 ................................ CCAGCGAGCACCGTGCATCCCCATTCAAGTTCCAC 2629240 32 100.0 34 ................................ ACGCCAGCGAGTACCAAAGCCACGAATGTCGAAG 2629174 32 100.0 35 ................................ TTGTGCCTGGTCGCTGCACATCAGCGACACGGCGC 2629107 32 100.0 36 ................................ AAGCGTGGCGCCCATTTCGTCCGACACTGGCCCGAT 2629039 32 100.0 34 ................................ TCCTGCCTGCTACCGGAGGCGTCGGCGGTAGCGT 2628973 32 100.0 36 ................................ GCACTACTGCGCCGGCTGCGCGCCCAGTCGCGGCAC 2628905 32 100.0 34 ................................ CGCGTCGCGGCGTTGCAGCGAGGGCGCCGATGAG 2628839 32 100.0 35 ................................ GTACGCACGCCCAACACGAGACAGGCCCTCGCGAT 2628772 32 100.0 35 ................................ GAGGCGGATCTCGCGGAGGCCAAGGCATGAGACTC 2628705 32 100.0 35 ................................ GCGTTCAACTGGCAGAAGCCGACCGAACTGGCCTC 2628638 32 100.0 34 ................................ CCGGTACGCCGGTTGCGCGAGGACGACATGCCGC 2628572 32 100.0 34 ................................ AAGCTCAGTGGTCGGGATGCCCGCGCAAGCGTTC 2628506 32 100.0 34 ................................ GAGCACGCGATCCCCAGCCCTGTGACTGCGCGGT 2628440 32 100.0 35 ................................ GGTTTGCCGGCGCCCGGCGATGTGATCACGCAGGA 2628373 32 96.9 35 ...A............................ CGCGAAGTCGGGCATGGCCTTGCGCCAGGTGTAGG 2628306 32 100.0 37 ................................ ATCACGAGGGCGGTCGACGCGCGTCCGCTTTCCGGTG 2628237 32 100.0 35 ................................ AAGCGCTACCCACTCGCGATCGGCGCCGAGCGTAT 2628170 32 96.9 35 .........C...................... TACAAAAGCCAGATCGGTAGCATTTAGCTGCCTGA 2628103 32 93.8 34 .........C....A................. AACTGCTCCGACTGGGTCTTCCTGCTGCGCCAGA 2628037 32 84.4 0 ......T.C....C.......C..C....... | ========== ====== ====== ====== ================================ ===================================== ================== 68 32 99.6 35 GTCGCGCCTTTCGTGGGCGCGTGGATTGAAAC # Left flank : TGTGGAAGTAGGGCAGGCCGATGATGGTTCTCGTCAGCTACGATGTGAGTACCCGTGACGCCGGCGGCGAGAAGCGCCTGCGCCGCTTGGCCAAAGCCTGCCGGGACTATGGCCAGCGGGTGCAGTACTCGGTCTTCGAGATCGAAGTCGACCTTGCGCAGTGGACCTTTCTCAAGAGCAGGCTGTGCGAACTGATCGATCCCGAGCACGATAGCCTGCGCTTCTACTATCTCGGCCGGAATTGGCAGAACAAGGTCGAGCATGTGGGTGCAAAGCCTGTCCTCGATCTGAATGGCCCCCTCATCCTCTGACTCATCTCTACGCGCGAACCCCAAGCAGCCGGGCAGACCACGGGAGGTTCGCAAAGGCCGCGGGGCCCCGTGAGCAGGCAGTTCCCCCCGCCTTTCCATGTCCCCTCTGGTTCCATTTGCAGGAGATTCCCCGCGGTTCGCGGGAATGCGGTATTTTCCTTTTTGTCTTCAATCGGTTGCGAGGACGAC # Right flank : AACGGCCTGCGTGACCAGATCCCGATGGCACACAGGCCGTTTTCCCTGCGAGACAGGCATCGAACAAAGCCAGTCCCCTACTGCCTCCCGGAAAGATCCAGGAGAGTGCCGAGAGGACGTCTCACAGTCTTACTGCAGGACGTCCCTTGCCGGAGCAGTTATGTATTGTCCTTGACCACCTGGCTCACGCCATTCGATTTGACCGAGGAGATGCCCGCGTCACGTGTGGACTCGGAGGCATACATCTGGCTGGTACCGATCACTTGGCTGTTTGCAGCCTTCAGATTGAAATAGAGCTTGCCGTTCGACGCCGACTTCTTCTCGTATCGGTCCTCCGACTGGCAGTTTGCCTGCACTGACGCTATGCCGTTCTCCGCGGAAGCCCTGGCTTTGTAAAGTTCACTTGTGAGTATCGTTTCTGCATTGCCGGCCTTGAGAATGAAACGAAACTGACCGTCTGTACTCTTGCTCAGCTCGAACCAGCCTGCCATTTTTATCTC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTTCGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //