Array 1 1165504-1166997 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056850.1 Citrobacter freundii strain RHBSTW-00120 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1165504 29 100.0 32 ............................. CTAATAGTCATAATTACCCCTGTGTTTGATAA 1165565 29 100.0 32 ............................. GGGGGATAAGTACAAATAATGGGACTTATTTC 1165626 29 100.0 32 ............................. CCTGGCCGATCAGCTCATGGGCGGCGAAGCCA 1165687 29 100.0 32 ............................. GTTCAGCAGGAAAGCGACCTTGCTGCAAAAAT 1165748 29 100.0 32 ............................. GCTATGTGCGCGACTTTATATCCGACATTGCC 1165809 29 100.0 32 ............................. AACAGCGCAAAAGGCGCAGCAACGGTGCAGAG 1165870 29 100.0 32 ............................. CGACCTGGAGGAAGTGGCCCACGCTGTAGTGA 1165931 29 100.0 32 ............................. CCTGGGGCTTTTATCGTGGGGAGTTGCCTGAA 1165992 29 100.0 32 ............................. GGGTTTGAGGCATCCAAAATCATATTCATATC 1166053 29 100.0 32 ............................. TGACGATGGATGAATGGCGGGAGCTGGCGGAC 1166114 29 100.0 32 ............................. TTCATTGTTGATACCTTGTGTTAGGTCGCAGT 1166175 29 100.0 32 ............................. ATCGTGCTGACGTTCGCCTGGTTGAGCTGGTT 1166236 29 100.0 32 ............................. CCTGCACCTGCATTTCAGAACGCAACCGTTGT 1166297 29 100.0 32 ............................. AGTGTCACATCGGCGGTTATCGCTTTGCTGTG 1166358 29 100.0 32 ............................. CCTGCACCTGCATTTCAGAACGCAACCGTTGT 1166419 29 100.0 32 ............................. AGTGTCACATCGGCGGTTATCGCTTTGCTGTG 1166480 29 100.0 32 ............................. GTAAAAGCCAGACCATGAAAAGCCGCCACATC 1166541 29 100.0 32 ............................. GCGCTGACGGTATTGAGTGCGATTTATATCAC 1166602 29 96.6 32 ............................T GGAACGATGTGCAGAAAGATTTCTCCACATCG 1166663 29 100.0 32 ............................. CTTGGTTTTCTGACCTGTGGGCGTACTGGTGG 1166724 29 96.6 32 .............T............... ACAATACGCTTTTTACCATCTGGCGTTAGTAG 1166785 29 96.6 32 .............T............... CTCCCGGCCGAGGCTGTCACCGTTCGCCTGAA 1166846 29 100.0 32 ............................. CAGCAGCGTGACTTTCACAATGACCAGATGGA 1166907 29 100.0 32 ............................. GGATTAGCCTTGATTAGCGAGTATCAAAATTT 1166968 29 96.6 0 ...........................A. | A [1166988] ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.5 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCCGGTGAGATCGAACCGCCACAGCCCGCGCCAGATATGCTACCACCCGCTATACCCGAGCCGCAGTTGCTGGGTGATGGCGGACATCGGCGGCATGGCTGATGAGTATGGTGGTGGTGGTGACGGAAAATGTACCGCCGCGTCTGCGAGGGCGTCTTGCGATTTGGTTACTGGAAATTCGAGCCGGTGTGTACGTCGGCGATATTTCAAAACGTGTGCGAGAAATGGTCTGGCAGCAGATTACACAATTGGGTGGTGCTGGAAACGTTGTGATGGCCTGGGCTACGAATACGGAGTCCGGTTTTGAGTTTCAAACCTGGGGTGAGAATCGACGTATTCCGGTGGATTTGGATGGGCTCAGATTGGTTTCCTTTCTTCCTGTTGAAAATCAGTAGGTTGTCTGTTCTTTAATAAAATGGATTTGTTAATTATAAGTTGGTAGGTTGTTGCTTGCTAAAAAATATATTAGAAAACAGTTATATATATCTAGA # Right flank : GCGCAACATTCAATAATTTGGTTTCATAAAAATTATGAGTTTTTTTCAGCCTTTGCCAGCTCTTTGACCAGTGGCAGCATAATGCGTACCACGTCGCGACTGCGGTGCTCAATACGACCGGGTAACGCTTTATCAATGTGCTGCTGGTTATCAAGTCGAACGTCGTGCCAGCTGTTGCCTGCAGGGAATGAGGCGGTTTTGGCTCGCTGCTGATAGCCGTCTTTATTACCCAGATTCCAGTTGGTGGCTTCGACGGAGAGCACGGCAATCCCCGCTTTGTCGAACACCTCCGCATCGTTACAACATCCAGTGCCTTTCGGGTAGTTCTTGTTCAGACCGGGATTAGTGCTGGCGGAGATACCGCGACTGCGTGCAATAGCCAGCGCCCGGTCGCGCGTGAGCTTGCGGACTGCTTCAGGTGTTTTTTGCCCGCTGTTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //