Array 1 28093-26625 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015940.1 Legionella pneumophila strain C8_S plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 28092 28 100.0 32 ............................ TTATTAAAGTAAATATTAATTGCCCACTTTAT 28032 28 100.0 32 ............................ TTTTGCTGGTGAAGATGCAACGCTTTCAAAGG 27972 28 100.0 32 ............................ TTAGTTTAATTAATGAACTGGTTTGTTGTATT 27912 28 100.0 32 ............................ TATGTGCAGATAGGTGAAGGTGGGTATGCCCC 27852 28 100.0 32 ............................ CTTTCTTCAATCGTTGGCCTATGCTGTCCGTT 27792 28 100.0 32 ............................ TACTAGCCCTTAGCTATGCCGAGCTTGATCAA 27732 28 100.0 32 ............................ GTGTATATGATTTAACGTTGATTTCATGGGGG 27672 28 100.0 32 ............................ TACGTGCAGATAGGTGAAGGGGGGTATGCCCC 27612 28 100.0 32 ............................ AGAAGGTCACTTGTTTGAATGGTCATTACAAC 27552 28 100.0 32 ............................ CAAGAAGAACATAGCCAGCCTGCTAGCCCTTA 27492 28 100.0 32 ............................ TTATGGCTTGTAAGTTTTGTTTTGATATGTGC 27432 28 100.0 32 ............................ AAAAGCATGGCGTCCCATGTCTAAATCTAATA 27372 28 100.0 32 ............................ TTATACGCTTCTTTCATAGCTTTATAGTTTTG 27312 28 100.0 32 ............................ AACGATAGAAGAAAGGGCAATAGTTAAGCGTA 27252 28 100.0 32 ............................ AATACAAGAAAATATGAACTATAGCGCTAAAA 27192 28 100.0 32 ............................ AATAGCTGCCCAAGGTGTCATGAATGTTAAAG 27132 28 100.0 32 ............................ TGTATAATACAAAGTATTGACGGACCCAGGAT 27072 28 100.0 32 ............................ CATATATGCTTTGACTTGTTGGAGCAACAACA 27012 28 100.0 32 ............................ CTAAAGCTGTTGCAAAAAAATATAATAAATCT 26952 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 26892 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 26832 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 26772 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 26712 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 26652 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : TTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //