Array 1 966181-966943 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP019894.1 Neisseria lactamica strain Y92-1009 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    966181	    32	 100.0	    34	................................	TTTGCGGTTGGAACAACATTGACCGGATTCTTGA 	
    966247	    32	 100.0	    34	................................	CATTGGATGACACTCGGATTGCTGTCGCACCATA 	
    966313	    32	 100.0	    35	................................	TTTTAATTCTTCCATTTCAAGCTCCTATCTGGTCG	
    966380	    32	 100.0	    35	................................	CTGTCCGTGGCGTAAGAACCACTACATAGGCGGCA	
    966447	    32	 100.0	    34	................................	CAAAGTACGAATGGGATTACCTGTTTGGGAAATG 	
    966513	    32	 100.0	    34	................................	AATCTCTTGAGAAAAAGCAGGAACAAAAAAAGCG 	
    966579	    32	  96.9	    35	..........T.....................	CCAACAGGGAACGCCATTGAAGGAAATCACAAAGG	
    966646	    32	 100.0	    35	................................	GGGCTAAGGTCGTCAAAATCTTTAGCCCATTGTGC	
    966713	    32	 100.0	    35	................................	AGATTATAGGGGGCATAAATTCAAGTCGGCTAAAG	
    966780	    32	 100.0	    35	................................	TGAAACTGCGAAGCCAACCCCCCTTACTAACAGGG	
    966847	    32	  96.9	    33	........A.......................	AAGGCAGAAATTGATTTTGATTTCGTCACCAAC  	
    966912	    32	  93.8	     0	............G.......A...........	|                                  	
==========	======	======	======	================================	===================================	==================
        12	    32	  99.0	    35	TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC	                                   	       

# Left flank :   CATGGAGGGACAAGAAAATGCTGATGTTGATAACTTATGATATTTCGTTGGAAAATGCCGAAGGGCAGGCAAGGCTGCGGCGCGTAGCGAAACTGTGCCAAGACTACGGCGTGCGCGTGCAGTATTCCGTGTTCGAATGCGACATCGCACCCGACCAATGGGTAGTTTTAAAAGACAAACTTTTAAAAACCTACAACCCCGAAACAGACAGCCTGCGCTTTTACCACCTGGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGCGCAAAACCGGCGGTCGATATATTTAAGGACACGCTGATTGTGTGAATCGCCAACCTGTTGTTCCCATAAAAATGCGGCAGGGTTGGCGAATCTGGGTTGTTCTTTAACAATCAGGATATTGCAAATGTGGATATGGCGGATAAGGCTGTGCTATACTCATGTTTGTGCTTTTTTCGGGAGTTTGGCGAAGTCGGGGCTGCGAAGCCTGATGTAGTAAGGCTTTCGGAAGAGGCT
# Right flank :  CGGCGCGGACGACATCCGTTTCCTGCGCGAGTAGGGTAAAGGACAATCTAAATTCCCCCCGCAGCTTAAAATCTTGCCGGGTCTGCACAAAAATGCCGTCTGAACAGGTTTCAGACGGCATTTTGTTTCAATCGGAAATATCTTTGTTAAAAACGGGTTGATATTATCCGCACATATTAATATAATGATAATTATTATTAATTAAATAGGGAAAAAGTAGGGATGTGTAAACTGAATTATGGCGGCATTGCCTTGCTGCCGTTGATGCTGGCAGCCTGTGGCGGCAATTTCGGCGTGCAGCCTGTTGCCAAACCAACGCCGATCGCGCAAACCCCGTCAGATTCCAAACCGTCCAAACCTGAGGACGTTCCTACTCCGCCCCCTGCCAAACCCTCTATAGAAACCACGCCGGTCAATCAACCCGCCGTCGGTGCGGCAATGCGGCTGCCAAGGCGGAATATTGCTTCCTATAAACAAGACGGTACGGAAATTCCCGACAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.90,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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