Array 1 2188967-2182863 **** Predicted by CRISPRDetect 2.4 *** >NC_015437.1 Selenomonas sputigena ATCC 35185, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2188966 32 100.0 34 ................................ TTGATAGTATGCCCTTGGCACTTCTCTGCCTTTT 2188900 32 100.0 34 ................................ ACAGTCCAAGAGTACGAACGGCAAGATGTTTGAA 2188834 32 100.0 34 ................................ AACGGCCTATGATTCTCCGACACCGTTGAATGAA 2188768 32 100.0 34 ................................ TACGATATTCGGCAGTTCCGCTTGAAAACGGCAG 2188702 32 100.0 34 ................................ CACCAGGCACGCGCCCGCCTTCTGGCGGCAGGGC 2188636 32 100.0 35 ................................ TGCTACTCGCGCGGCGGGGCGGGCGAGGCGCTTGC 2188569 32 100.0 34 ................................ GCGCTGCGCGAATGTTGTCACCGATAGACATAAG 2188503 32 100.0 34 ................................ TCTCGAAGGGCGTGCCGATGAAGTCGCTCAAGGC 2188437 32 100.0 34 ................................ GTCGTGCTGCAAACAGCAAAGCCCCTCGTGCTGT 2188371 32 100.0 34 ................................ CCCGGCGCGTGTAGCTCGGGGCGCAGGGGCGCGG 2188305 32 100.0 34 ................................ GCGATCAAACTCGGGTTCGACCTCAATTTTCGGC 2188239 32 100.0 33 ................................ TTTGTCGCCGCCTCCAACTTCTCTAACGGCTCA 2188174 32 100.0 34 ................................ CCTGCCCGCCGCCACCGATGGCGCTCAAATTGCG 2188108 32 100.0 34 ................................ ACCGCGTCCGTATCGTCGGCGACGACGCCGAAGC 2188042 32 100.0 34 ................................ TTATGGACTTTGGCGAGCACATAGGCAAGGTTCA 2187976 32 100.0 33 ................................ GTCTCCGTCGGAAGCGTACCGTTCGAGATGACG 2187911 32 100.0 34 ................................ AGGCTTTCATCCGTCCGGATGCCAACCAGTTGTG 2187845 32 100.0 34 ................................ AGCGGCTTAAATCCTTCCGCCTCAAAGAGCGGTA 2187779 32 100.0 34 ................................ CATTGGCTGCCGAGCGGAAAAGGCATTTGCCATC 2187713 32 100.0 32 ................................ GATACAGCCGCCTTAGACTGCCAGTCGTCCTT 2187649 32 100.0 33 ................................ CTCTACGTATCGCTTGCCGTCAATATCATAGGT 2187584 32 100.0 34 ................................ CCAAGACTTCCCACAGCCGCCGCACACTCCCTTA 2187518 32 100.0 33 ................................ ACATCCTCCGCTGCCGCCTCGTCGTTTTTTCCG 2187453 32 100.0 34 ................................ CGTCAAAGACGAAGGCCATATTCGCAGGCATTTG 2187387 32 100.0 34 ................................ CTTGATGCTGTCATACAACAGCTTCATTTCCGGC 2187321 32 100.0 34 ................................ CTCTCGCGTGCCACTGCGCCGCTCCGTCACGGTG 2187255 32 100.0 34 ................................ TTATCCCTCCATATCTTGTATCTGTACTTCGAGG 2187189 32 100.0 34 ................................ TGCGGTCATTTCGCGCGCAATCTCAGCGGTGCGC 2187123 32 100.0 35 ................................ AAGAGCCACACCGCCCATGCGTCTATGATGGCGTC 2187056 32 100.0 33 ................................ TTCAAGCCCTCGCTGGATCGTATCGAGCACTTC 2186991 32 100.0 34 ................................ TCCATCGCCAATGCCGCCTCATACTGGCTGACAG 2186925 32 100.0 34 ................................ GACCCTCCCCCCGGCATCAACATTTCCCGCCAAT 2186859 32 100.0 34 ................................ CACAGACAGGCAAGACAGCGCACGATCCACCGCC 2186793 32 100.0 35 ................................ TTCAAGCACGGCTCTAAAATCAGCGCCTTTGTTGC 2186726 32 100.0 34 ................................ ATCCGCTTCGTTCTCGACGAGAGCGGCGACGATG 2186660 32 100.0 34 ................................ CGATTCGTCCTCTGCGTCTGCAAATGCAAGCTCC 2186594 32 100.0 34 ................................ TCGTGCCGTCGCTCGAATATTATCCTTCGTGATG 2186528 32 100.0 34 ................................ AATCTCGCTGAGATGAGTTCCAGTGCCGTCCGTG 2186462 32 100.0 34 ................................ AAAGCAGAAACGCTCGGACGGCAAGGCTTGTTTC 2186396 32 100.0 34 ................................ GACAAGATTTTCCTTGCGCCACAGACAGCTCATG 2186330 32 100.0 34 ................................ GGATCGCTTGTCGCGAGGCTGAACATCTCGCCCG 2186264 32 100.0 33 ................................ TGCCTGTTCTTGCAGGCGTCACCGTTGTGCTCC 2186199 32 100.0 34 ................................ CAGTGCCGTCCGTGTTTTCCCGGTGCCTTGTTCC 2186133 32 100.0 34 ................................ CATTGACAATGTACTTTTTCTTCATCGTGGCTCC 2186067 32 100.0 34 ................................ GCGTGTCGGAATGTACGTCGTATCGCAGCCGTTG 2186001 32 100.0 35 ................................ GCTCCCAAGTAGCCGCAGCGGATGTCCCCGCAGAC 2185934 32 100.0 34 ................................ GTCTGCGCCTGTCCACCGGCCGAACGGCCTGCTC 2185868 32 100.0 34 ................................ GCGTGTCGGAATGTACGTCGTATCGCAGCCGTTG 2185802 32 100.0 34 ................................ TCGGCCTCCTCCTCGTCTGTCGTCCGACTGCCCC 2185736 32 100.0 33 ................................ GGCGCTGCAGTTTGTGCACGCCCGCCGAAGCGG 2185671 32 100.0 35 ................................ GCGCGCTGCTCCCGGACGTGCAGCGGCGTTCGCAA 2185604 32 100.0 32 ................................ GAAAATCTCGCGCATGTTTTTCTTGCGCCGAC 2185540 32 100.0 33 ................................ TGCGGGCTCCATCCTCGCCTCGCCATCTCATCC 2185475 32 100.0 34 ................................ GAGCCGCCAGCACCATGCGAGCGTCGTCACCTCA 2185409 32 100.0 33 ................................ AAGTTATCAACTGTCTCTTGAGATACACCTGAC 2185344 32 100.0 34 ................................ GCATCCGTCAGGCTCACGCCGAAAAGGTCGAGCG 2185278 32 100.0 34 ................................ ACGACGGCGTTCTGCTGCCTTTGTGATTCACGCT 2185212 32 100.0 34 ................................ GCTCGCAGTTCATAACAAGCGATGTAGGTGTTGG 2185146 32 100.0 33 ................................ GACCTGCCCGGGAGAGCCAATCTGATTAACGTA 2185081 32 100.0 35 ................................ CAGGACGCCGACCTCCTCACCGATGAGGAGGTCTC 2185014 32 100.0 34 ................................ TCTTAATAAAATATAAAAATTGTTTCCGCGCACA 2184948 32 100.0 35 ................................ GACGAGAGAATTGCTGAACCGCATGGGTAAGGGTG 2184881 32 100.0 34 ................................ CGCTTCCGCCGTGTACGGGATATAAAAACGTGGG 2184815 32 100.0 33 ................................ GCTGGATCGTGCGGGCTTCTTTTTCTCTCCCTC 2184750 32 100.0 35 ................................ GACGAGAGAATTGCTGAACCGCATGGGTAAGGGTG 2184683 32 100.0 33 ................................ GCTTGGCTCGACGAAATCGCCATGGGCTTGACG 2184618 32 100.0 34 ................................ GCATGGAGGAAAACATATCTATACGTCGGGAAAA 2184552 32 100.0 34 ................................ GATACAGAAAACGCAAAGTCCGTATTATTGCGGC 2184486 32 100.0 33 ................................ ATATTTATGCAGGAGACCGTCAAGCACATCCAT 2184421 32 100.0 34 ................................ TCGTCCAAAACAAGGCGCAGCACATGCTCCATAA 2184355 32 100.0 34 ................................ TCCGATATAAGGAATAACGTTGTTATGGAGCGAG 2184289 32 100.0 34 ................................ GCCGATGCGCATACCGGTATGGTATGCCAACATA 2184223 32 100.0 35 ................................ GCCTGCTGGTACAATTCCAAGCTCCAGTTCAACCC 2184156 32 100.0 34 ................................ ATCCGCGATCAGACGGGTGGCCGCCGCTGGTGGC 2184090 32 100.0 33 ................................ GCGAGAGACGTGCGCCCCTGTCGCTTATCGGCA 2184025 32 100.0 33 ................................ GGAAATGTGAGGGGGTAGGTCAGGTGAAAACAG 2183960 32 100.0 34 ................................ TCGATACGATCATCCGCTACTGCTGTGAAACGGC 2183894 32 100.0 34 ................................ GCATCCGTCAGGCTCACGCCGAAAAGGTCGAGCG 2183828 32 100.0 34 ................................ GCCAAGGCAAGGGCGATCTCTGCCCTCTGCCGCA 2183762 32 100.0 35 ................................ TTGCGCATCGGCATGGCGGAGAAGGAGCAAGCAAG 2183695 32 100.0 35 ................................ TCAGCGCAAGAAATTGCTATTCTCGCCGAGACGAT 2183628 32 100.0 34 ................................ TCTGCGTGAGCGGTTTTAAGTTCTCATGCCCTTT 2183562 32 100.0 34 ................................ GGAAAAAATGCCAGAAATGAAAAATTTTTGACCT 2183496 32 100.0 34 ................................ ATTCTGCTGGATAGCCGCATACTTCTGTCCTGCC 2183430 32 96.9 34 ............A................... GGATACTAGCCTGCGGCAAAAAGCATCGTAGCAT G [2183413] 2183363 32 96.9 34 ............A................... CCGTTGACGGCGAAAGTGGGGCGTGGCTGATGCG G [2183346] 2183296 32 96.9 35 ............A................... TCAGCCGATCGAGTTTGCGCGTAACGGCGCATGGG G [2183279] 2183228 32 96.9 34 ............A................... TCCAAAATGGATATAAACTCGGTGATCGCCAGAT G [2183211] 2183161 32 96.9 34 ............A................... ATCTATAACAAGATGCTTGGCGACCGCCTTGACT G [2183144] 2183094 32 96.9 36 ........T....................... GGCGAAAAGCAATGTCAAACAGGATGGAAAAAGGGA 2183026 32 100.0 34 ................................ CCGGGACAACGCCGCGCCAAAAGGACGCCCACGC 2182960 32 100.0 34 ................................ TCGCAGTAATGTTTTGACGCAGGATGATTGGCTC 2182894 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 93 32 99.8 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAT # Left flank : ATCCGGCGTTTTTGTGGAAATAAGCAGGAAAGATGGAGGGGGCGGTGGAAATGTTGATTCTCGTGACATACGATGTCAATACGGAAACATCTGCCGGCCGCACACGCTTGAGAAAAGTGGCGAAGTGCTGCGTGCGCCACGGACAGCGCGTGCAGAATTCCGTGTTTGAATGTGTTCTCGATGAAGCACAGTTCTGCACATTGCGGCATGAATTGACATCGTTGATTGATCAAGAAAAAGACAGCCTGCGTTTTTATAACTTGGGCAATAAATATGCAGGAAAAACGCAGCACGTCGGTGCAAAACCAAGTTATGAGGCTGAAGGAACTCTGATGCTGTAGCAGGCATCTCCTTCGCGAGAATGGCCGCAAAATCTTTGTGCGAACCCGTATCACACAGAGGACTTTGCGACGAAAAATGCCTGTAACAGCATGGCCAAAAATGAGGTTCGCGAAAAATATAGCGCAACCGCTGTAATTAAGCCCGTGTAAACAGGCACA # Right flank : CGGCAAAACGATCGGCCATCGCCACTGCGCGAGAGTCGCGCCCACATGGGGCGTGATACGCAGATAAGTGCGACGTCTAAAACGCCTGAAATATGGGCTTTGGCGAGTCTCCTGTGAGGCGTACTTGGTCGAGGAGGCGCGAGCGGAACATTTTGCGCAACTGTTTACTCAGGCGCTCGTAGCGCTTGATGAGATCGTCGGCTGCGACGGTTTCGAGGTAGGCGAGATTGACGGTTGCTTGCGGACGCAGGGCGACGATTTGCGCATTGAGCTCAGAATAGTGCATATCAAACTCCTCGCGCTGGATCAGGCCCTCGACGTAGAGTTCTTTGAGTCGTGCCTGCTTTGTCCTGAGTTCATCTATAGTGATGGCCTGCGCATCGGCACCGTGGGAAATCTTGTTGACGTAGGCAAGGTATCGCCGCAGCTCAAGCTCCAACGACGTCAACAGACTAGTCTTGACGTGATTTTCTCGCCAATATGTCTTGTGCGGGCACTCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2467744-2467410 **** Predicted by CRISPRDetect 2.4 *** >NC_015437.1 Selenomonas sputigena ATCC 35185, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2467743 37 100.0 36 ..................................... TGCTACGCCCTCATCGATGAGAATCTGAACTTCGTC 2467670 37 100.0 37 ..................................... TCTACCTTCTCAACAGCAACCTCGTCAATGTTCTCAC 2467596 37 100.0 40 ..................................... CCTTCGAAAATTTCGATAGAAACACCGCCCTCGTGTGGAA 2467519 37 91.9 36 ...A...............T...........G..... TCCTCAGCCTGGTTGGCGTTGTTCCAGCGATCTGTT 2467446 36 86.5 0 ........A-....T..............T......G | C [2467413] ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 95.7 38 GTCGCATGTGACCTCATACCGCTTGCGGTATTGAAAC # Left flank : TCGTCGGCCGCATCTGCATGGATCAGTGCATGATCGACGTCACCGACATCGAAAGAGTCGCCGAAGGCACGGAAGTCACGCTCTTCGGCTCGGCGACGCTGAGTGCCGACAATGTTGCCGCTTGGCTCGGCACAATCAACTACGAGATCCCATGTCTCATCGCATCGCGCGTGCGGCGCGTCTATATCTGAGCTTTCAGGACATATATTCAGCGGCGTCCCCTTTCGCTTGAAATGGGACGCCGTTTTTGTTTGACAAAAAGGAGAAACCATGCTACAGTATGAACTATAGGAAAACCTCTTGGAGGCGAAAAAACGGGGCAGGTTTTCCGATTTTCCTCGAATCGCCGCAAGCCTTGCTATATAAGACTTGGCGGGGTTATTACATACTCGCTGGGTATGTAATAACAGCCGAAAAAGTGCGATCACATGTTCGGCTTCGAGGAGGTTTTCCAAAACCATGATTTGAGCCTTCTGTTTCTGCGGCCTCCCAGACACAGA # Right flank : AAAAAGAGAGCCATCCGGCTCTCTTTTTCTTTGCCTATCATCGCGCCCTGCAAGCGCTGCATTATCTTGTGGCGCAAATCTTCTTCCTATGCTATAATATTAAACCATAGTATATCAATATGAATAGTATATTGGAGGAAGAATCATGAAAGACCATTCGCTTGAAGTGCACGGCTGCCATACCTACGATGCGACGGGGGCGATCAGTCCGGCGATCTGCCTGTCGGCGACGTTCCGTCATCCGCGTTTCGGCGAGAGCACGGGCTACGACTACGGACGCGTGGCGAATCCGACGCGCGAATCTCTCGAAAAGACGGTGGCGCTCTTAGAGCGCGGCGGGCGCTCTTGGGCGCTTTCCTCGGGCATGGCGGCGGTGCAGCTCGTTTTCTCTCTTCTTTCGGCGGGCGATCACGTCCTGATGAGCGAAGACCTCTACGGCGGCACGGTGCGTCTCGCCGAAGAAGTCTTTGCGGGCTACGGCGTCACCTTCGAATACGTCG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATGTGACCTCATACCGCTTGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA //