Array 1 3168597-3166287 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOMH01000001.1 Polycyclovorans algicola TG408 U741DRAFT_scf7180000000002_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3168596 28 100.0 32 ............................ CCACGCGGCCGGTGCGGAACTGCGGTTTGAAC 3168536 28 100.0 32 ............................ GCCCAGCTGTAGGCGGTGCTGAGGTACGCGAC 3168476 28 100.0 32 ............................ AAAGCGTTGGGCGGTGGATGGAGTTGAAGAAG 3168416 28 100.0 32 ............................ GAACAGGCAGCTCAGAAGAACTTGCGAAACGT 3168356 28 100.0 32 ............................ AACCGATCCACTGGGTTTTGCTGCCCTTGCCG 3168296 28 100.0 33 ............................ GATTGAATGGCTTGTCGATCTGCTCGACCTGAT 3168235 28 100.0 32 ............................ AACGAGCTGGACCTGCAAGACCCCGAGCCGGG 3168175 28 100.0 32 ............................ TCAGCGATGAGCAGGCCAAGGTGCTGGCGGCC 3168115 28 100.0 32 ............................ AGCTCGCTGCGGGTGACGTAGGGTGACGCGCC 3168055 28 100.0 32 ............................ TTGACCCCTGCTCGATGCTGGTGCTGACCGCA 3167995 28 100.0 32 ............................ AAGCCCGATCCGTGCGTTGGGTATCCGCAAAT 3167935 28 100.0 32 ............................ AGCGTCAGGTACTCACGCTCAAGGGCGGCAGC 3167875 28 100.0 32 ............................ AGGTAGGCGCGCTGGTCGACATCAACGACAGC 3167815 28 100.0 32 ............................ AGGCCAAACCGGTGTTTGGTGGATTGGGTGTG 3167755 28 100.0 32 ............................ TTAATAATCCGCTTGCCGTCTGGATCAACGCC 3167695 28 100.0 32 ............................ AAGGGGCGGGTCTTCCGCCGGGTTGAAGGCAA 3167635 28 100.0 32 ............................ GTTCCACTCGCCAGCCGTTTCTTCCACGTCCG 3167575 28 100.0 32 ............................ ACCACGTTGCCACCCGCCCGCACTGCCGAGCG 3167515 28 100.0 32 ............................ TCGGTTTCAAGCAGCGCGATTGCGGCCGTGTT 3167455 28 100.0 32 ............................ GTCAACAGCGGCACTTTGTCAGTCATCGTTCT 3167395 28 100.0 32 ............................ GGCTCGCCTCCGAACGACATTAAACGAATGAA 3167335 28 100.0 32 ............................ ACCCGGAATGGCGGTGCCGACGATCTGCAGCG 3167275 28 100.0 32 ............................ AGGTCCTGCACGGCATCGTCCAGGCCGGCAAT 3167215 28 100.0 32 ............................ CTGCTGGGTGACTGTGGTCTGCAGGCCGCCGA 3167155 28 100.0 32 ............................ AATGCCGACGCGATCACCGCCGTGACGACCGA 3167095 28 100.0 32 ............................ CTATTGGGTCACCGTCGTCGTCAGGCCATCAA 3167035 28 100.0 32 ............................ GTCGTAAGCCTCAAGCGGGCTCAGATAATCCA 3166975 28 100.0 32 ............................ TTGGTGGTGTTCTCGAAATTGACCGGCTGCGG 3166915 28 100.0 32 ............................ CCGTGGCCGCAGGTAGCACGGCGGGGCAATGT 3166855 28 100.0 33 ............................ CGAAAGGCGGGCATGTAGCGCACGGACTCGATG 3166794 28 100.0 32 ............................ CTGCGCACCCTCTTCGCCCAGGGCCGCATCGT 3166734 28 100.0 33 ............................ AGATAGCTGATGCCCGGGGCCGCGAATGCAAAC 3166673 28 100.0 32 ............................ AGTCCTGCCGGATGCGCGACGGCGTCTGGTGC 3166613 28 100.0 32 ............................ CGTTAAACAGCATGGGTGTGGTTTTCATTCAT 3166553 28 100.0 32 ............................ AGTAGCAGCCCTGGGCGATTTCGAGGCGGATC 3166493 28 96.4 32 .......A.................... GCACGCCCACGTAGCGTATGCCGTTGCTGCGC 3166433 28 96.4 32 ..........A................. ATAGGCGAGAAACAACAGGGCTGTCTTGCCGC 3166373 27 96.4 32 ............-............... CGGAGATTCGTCATTGATGTTGCTCCTAGAAA 3166314 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 39 28 99.7 32 GTTCACTGCCGGATAGGCAGCTCAGAAA # Left flank : GTCGCAAGGTCGCGATCAGCTCGCGCTTGAGCTCGCCCACGGGCTGGGCGTAGATGCAGTTGTAAATGGTCTCGTGTGACACGCGGTGCTCATGGCCTTTGGGGTACACCGCTGCCAGTGTCAGGGCAATCTGCTCGGGTGACCACCGCAGGTCCAGAAAATGACGGACGATCCCGAACAGGAGGCCTTCACAGTGCAGCTTGTGTGGAGGGCGGTTCAGCCTGCGCCGCCGCTGGACAAAAGCTCGCGCTGCGGCACTGCCATAGCCCGCTGGCGATCGATTGCGAGACAGCTCCCGGCTGATGGTGCTGGGCGAACGAGACAACACTCGCGACATCGCACGCACACTGAATTTCTGGTGGACCAAACTGGCCAGCGTCACGCGCTCTTCAGGCTGGAGTTGCTGGTAACGCTTCGGTGAAATGCTCTGCATGCGCGAACCTTACTCGGTAGCAGGTGTTGCACTTCAGGTTTGAATCCGCCCTGTGTCGCCCGGTGGC # Right flank : AGATTGATGCGGATGCCGTTCGCGATTCGGTTGCCCACGCTAGTCTTGCCCGGCTGATCAACCGACTGCGGCCGTGGAGCCACGGCTTCAGTGTCTGAAGTGCCGCACGCCGGTGAACACCATGGCCATGCCGGCCTCGTCAGCGGCGGCGATCACTTCGCCGTCGCGCATCGAGCCACCGGGTTGAATGACGGCTTTGATGCCGGCGGCCGCGGCCGCGTCGATGCCGTCGCGGAAGGGGAAGAAGGCGTCCGAGGCCATCACGCTGCCGGCGACTTGCAGCTTTTCATCGGCGGCCTTGATGCCGGCAATTTTGGCCGAATAGACGCGGCTCATTTGTCCTGCGCCGACGCCGATGGTGCGTTCGTCGCGGGCGTAGACGATGGCGTTGGACTTGACGAACTTCGCCACGCGCCAGCAGAAAAGAAGGTCGCGCAGCTCGGCCTCGGTGGGCGCGCGCTGGCTGACCACCTTCAGGTCGGGCCGTTGTACGACGCGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3177286-3169754 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOMH01000001.1 Polycyclovorans algicola TG408 U741DRAFT_scf7180000000002_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3177285 28 100.0 32 ............................ TCAAGCGTGTCGCTGCTGTTGTCGTCTACGGC 3177225 28 100.0 32 ............................ GCCGATGCCGCCGAGACCCACACGCTCAGCCT 3177165 28 100.0 32 ............................ TTGTCGAGGCCCTTGGGCCAGTATTCCTTTTC 3177105 28 100.0 32 ............................ TGGAGGGAAAGTGTGAGCTGGCACAGGCCGAC 3177045 28 100.0 32 ............................ TTAGTGGGCTTCAGCACCGAGCTGATGATGCC 3176985 28 100.0 32 ............................ TGGTTGCCGATATTCCAGCCCGCGCTCCAGCC 3176925 28 100.0 32 ............................ GCAGGGTGGCCAGGGCAGCGCTGAGGTCGCGC 3176865 28 100.0 32 ............................ TACTCCGCGCCAGCAAAGTGCAGAACCCGGAG 3176805 28 100.0 32 ............................ TCATGGCCATTCTTGCGGGCCAGGCCGACAAA 3176745 28 100.0 32 ............................ CGCCGAGAAAAGCTCGACCTGCCACTGGCAGA 3176685 28 100.0 32 ............................ ACTAAAGTCGATGCAGATTGAGTGTGGAATAT 3176625 28 100.0 32 ............................ GCGTGCCAATCACGGTGCTCATGCGCCCAGAT 3176565 28 100.0 32 ............................ ACGTTCGCGCATAGATTGGAGCACGTCGGGGC 3176505 28 100.0 32 ............................ ACATGCACCACCGCCCAACGCTCGCCAACGTA 3176445 28 100.0 32 ............................ ACGAAGCGGTAGCGAACCGACTCAAATAAGGT 3176385 28 100.0 32 ............................ AACATCTTCGAGACCGTGCGCAGTGCTTTGAG 3176325 28 100.0 32 ............................ ATCCGCGCCATAGGTCCGTAGGCGAGCCAATC 3176265 28 100.0 32 ............................ CAAATCGCCAAACCCAAAACTTCTTACCACGA 3176205 28 100.0 32 ............................ AAATTGCGTGTCTAGCTCTTTCAATATCAGAG 3176145 28 100.0 32 ............................ AAACCCGCATCAACGAACTGATGCGCGCGGGC 3176085 28 100.0 32 ............................ AGCATGGTGTCGATTGCGGTTCGCAGCCCAGC 3176025 28 100.0 32 ............................ CGACGATGAATTGGCGACAGGACAGGAATACG 3175965 28 100.0 32 ............................ ATGACCGACCGCGAAGTGATGCAGATGGCTCT 3175905 28 100.0 32 ............................ ATATGGGGAGCGCACTTGATCGGCGCGTATTG 3175845 28 100.0 33 ............................ TGGAGCACCTGGGCGAGCCGACGTGGACATTAT 3175784 28 100.0 32 ............................ CGAACGGACGCGAAGAGTTTGCGCGGGTCCGG 3175724 28 100.0 32 ............................ TCTTTGTGCAGATAGATCGTCAGGTTATTGGC 3175664 28 100.0 32 ............................ ATGGATGGTCGTGGAGCGCGCGGTCTTCGTCG 3175604 28 100.0 33 ............................ AAATGGGTCGAAAACCATGTCGCCCTTGTTGCT 3175543 28 100.0 32 ............................ AGATTCCAGTACGTCGGGCTGGTGGCTTTTAC 3175483 28 100.0 32 ............................ AAGACCGCCAAGCCAGCTCAGTCTCGGGGCGC 3175423 28 100.0 32 ............................ TTCTTATCGCGCTCGATCACAGCGGGCGGAAA 3175363 28 100.0 32 ............................ ATTACGGAATCAGGGAACACTGTCCCGAATAC 3175303 28 100.0 33 ............................ TTTGCAAAAAGGCAAGGCTCGCGCTGGCTGTGT 3175242 28 100.0 32 ............................ TGACTTGTCTTCGTGCATGGTGGCCCCGCTGC 3175182 28 100.0 32 ............................ TTAAGGCAACGCAGCGCCCACTTGTTGCCGAA 3175122 28 100.0 32 ............................ CGAGTCGCGGCGTGTTCAAGCGCACAGTGCTG 3175062 28 100.0 32 ............................ TGTTCCGCGCCTTCCGTCGCGCATAGGCCCCG 3175002 28 100.0 32 ............................ ATTCTTCGACCGTCACGTCAGGCGTTACCGGC 3174942 28 100.0 32 ............................ AGCCAATTTGTGAATCTAGCGACGTTCAGATT 3174882 28 100.0 32 ............................ CCAACGATCTCGACTCCGTTGCGTTTCAGCCC 3174822 28 100.0 32 ............................ TTATGGCGTGGCATCCGTTACGCCGATCATCA 3174762 28 100.0 32 ............................ AGTCTGCGCAGCGTTCTTGCCGTCGCTCAGTT 3174702 28 100.0 32 ............................ TTCCACCGGGCCGCCTCCGAACGACGTGAAAC 3174642 28 100.0 32 ............................ TCAGGGGCAGCCGCAGCGCTAGGCTGTCCTGC 3174582 28 100.0 32 ............................ GCATCGAGTTCTGCCACACCGGTCAGCTCGCC 3174522 28 100.0 32 ............................ TGCGCATCGGTCAGGCTCAACAGGGTTTGCGC 3174462 28 100.0 32 ............................ TGATGGACATCAAGTGCGCCGCGTTCCAACGT 3174402 28 100.0 32 ............................ ACTTCGTATCGGACCTTGCGATAACCGCGATA 3174342 28 100.0 32 ............................ CCCGAGCCAACGCCCGCCGAAGTCTGCGCGCA 3174282 28 100.0 32 ............................ TTGACGAGATACTTTGAAACGCTCTCGGCACG 3174222 28 100.0 32 ............................ CTCGGGGTCCGTGCATTGTTCCAGCTCGCGGA 3174162 28 100.0 32 ............................ ACGAGAAAACCAGACGGCGATTTTTTGACCGA 3174102 28 100.0 32 ............................ CGAGCCATGACCGTGCTTGAAGGCTTGCGCAA 3174042 28 100.0 32 ............................ TCCGCCCCTACCAAACCGACATAACCGAACGC 3173982 28 100.0 32 ............................ GGCTCGAATCCGGCAGCGAACGGCACGCCGCG 3173922 28 100.0 32 ............................ AGCACGCCGGTAACAGGGTCAGTCGCGAAGAC 3173862 28 100.0 32 ............................ TCCATGGCGCTGCTGTAGATCGTCACGTCTAC 3173802 28 100.0 32 ............................ ATACCGATGCCCGCGAGGATGATCTCGTCAGC 3173742 28 100.0 32 ............................ TTCACCGTTTCGACGGCAGCGACGAAGACCGC 3173682 28 100.0 32 ............................ CGCAGCGTCAAGGAATTAATTGCCGAAGCCGA 3173622 28 100.0 32 ............................ AGTACGCGCAACCCGAGCATCGGCGACGAGGT 3173562 28 100.0 32 ............................ TGTAACTTCGCCTCAAACTCGGCGGGTGGGTA 3173502 28 100.0 32 ............................ TACGAAGCCACCGGCGGCGAGGAATCCGGCGA 3173442 28 100.0 32 ............................ ACCCGGGGGACGAATTGGAAGGCGAACCCGCT 3173382 28 100.0 32 ............................ AATCTCGAACTGCGGGCAACGGATGATCACGC 3173322 28 100.0 32 ............................ AGACTCGACAACGATGCGGATGGCGTCACGCT 3173262 28 100.0 32 ............................ GGTAGGAATGCGAAGCCTAGGCCCTGGTATTC 3173202 28 100.0 32 ............................ ACTGAGGAAACATTCTGATGAACGTATTCACA 3173142 28 100.0 32 ............................ ATTTAAGGATCAAAAATCATGACTGACATTCT 3173082 28 100.0 32 ............................ TTGACGAGATACTTTGAAACGCTCTCGGCACG 3173022 28 100.0 32 ............................ CCATGCGCCGCCGGGGAGGTCCACTGCGACGC 3172962 28 100.0 32 ............................ ATGGAGGGCGCAGTGCTGGCAAACCTCAAACG 3172902 28 100.0 32 ............................ ATATCAGTCTGGGCCACGCCGGTGCTGCTCAG 3172842 28 100.0 32 ............................ CTCTACGCCATCGGGCAACACGTTGTCACCGG 3172782 28 100.0 32 ............................ TGGAACATGGATGACACGCCCAACCGTTCCGC 3172722 28 100.0 32 ............................ TTCGATTACACCGACCCGACCGAAGTCGATTC 3172662 28 100.0 32 ............................ ATTCCGCGCGGCGAACGACATCGCCATGCAAA 3172602 28 100.0 32 ............................ TGCCGATGCGGAGCCAATGTCGGGGCTATGGA 3172542 28 100.0 32 ............................ ATTGCCACGGTCTGTGACAACGCTGGCACGAA 3172482 28 100.0 32 ............................ CGAAGCAGCACGTTGATAATCAGCAGGCCCTG 3172422 28 100.0 33 ............................ ATGGATGGTCGTGGAGCGCGCGGTCTTCGTCGC 3172361 28 100.0 32 ............................ GACAGCATCGTCGGCGTTTTCTGTTTTGAATT 3172301 28 100.0 32 ............................ TGAAAAAGCAATGTAAGCGCAATCAACGCTGT 3172241 28 100.0 32 ............................ GGAACTGGTCGAACTCTAGAATCATGCGCGAA 3172181 28 100.0 32 ............................ GACCAACAGCGTGAGGCCATTCGCATCGTCGT 3172121 28 100.0 32 ............................ TTTGCGACTACAAAATACTGGCGCCTGAATCG 3172061 28 100.0 32 ............................ AACACGGTGGCGGTGGAATCCGTCGACCACTT 3172001 28 100.0 32 ............................ GCCGTTCATGGTGAAACAGCTTTCCTCGGGTG 3171941 28 100.0 32 ............................ TCCCAGACACGCCGCGCGAAGATCACGCGATC 3171881 28 100.0 32 ............................ TCAAAGCGTCCGTCATGACCTCGTTCTAGGTG 3171821 28 100.0 32 ............................ TGCCCGACATTCTCGTGCCGGCATCTTTCGGC 3171761 28 100.0 32 ............................ ACCTCGACCAGAAACTCCCGCTGCGGGCCGCT 3171701 28 100.0 32 ............................ GCTGCCTGACCATCGAACTGCCGTGGCTGGAC 3171641 28 100.0 32 ............................ ATAAAGGTCGTCGAGCGCGGGGACCAGATCGA 3171581 28 100.0 32 ............................ TACAAAACTCAGCCCTATATGCACAGAAGAAC 3171521 28 100.0 32 ............................ TGCGCGATGCCGCGCTGGTATACCGTCTCGAT 3171461 28 100.0 32 ............................ GACCTTCCGGCGAACCTCGCTGAACATGCTGG 3171401 28 100.0 32 ............................ TGCTGATGCGGAGCCGTTTGCTTTTTCAGTGC 3171341 28 100.0 32 ............................ ATGAAGATCATCAAGGCTTGCAGCAAAGAGAT 3171281 28 100.0 32 ............................ TGCAAGTCACGGAGCTTCTGTTGAAGGCGTTC 3171221 28 100.0 32 ............................ CGAACCGCTACAAAGAGCTGATCCACTATGCC 3171161 28 100.0 32 ............................ TTGACCCGACTGCCGCGAAGGCAGCCGACCAG 3171101 28 100.0 32 ............................ TGAAGCCGCCTAAAAGGAAGCAAGAATTATGA 3171041 28 100.0 32 ............................ TGTGCATCAGCGACGACCCGAGCGACGCGGGC 3170981 28 100.0 32 ............................ AGTTCGACTCGTTCGTGACGTCTCTGTCGGCC 3170921 28 100.0 32 ............................ GATAAACGGCCGCAGCGCGGCTTGGTCGGCCT 3170861 28 100.0 32 ............................ ACCCACACCGACGACCAAGTGCGCCGCGCCCG 3170801 28 100.0 32 ............................ GACTGGTACGCCTACTTTTTTGAGCCGGTGAC 3170741 28 100.0 32 ............................ AGCATCGGCGAAGCGGTTGCCGCCAACACGGC 3170681 28 100.0 32 ............................ ACGCCCGAACAGGCGCCCCATTCAAAAGCCCC 3170621 28 100.0 32 ............................ TGATCTTCGCCCTGGCCAAGTACACGCGTGGC 3170561 28 100.0 32 ............................ CTCAGAAATGGAGTATCCCGTGCTCGAAAAAC 3170501 28 100.0 32 ............................ TCTACGCCGGCGGCATTGAACGCCCGCGCCAT 3170441 28 100.0 32 ............................ AAAGCCCGTGGTGATTCATGACCACCCGCGGC 3170381 28 100.0 32 ............................ CAGCTCAGTGGCGGTGCTGGGGTTCATGGCCA 3170321 28 100.0 32 ............................ TACGCGCCGAGAGCGCCCGCTTTATCGCGTTG 3170261 28 100.0 32 ............................ CGTGGCTTCGCATCAATCGGTCTGCACAACCC 3170201 28 100.0 32 ............................ ATGAAACGGTGCGGCGAGATATGGCTGAGCAT 3170141 28 100.0 32 ............................ CCCAGCACGTCCTGAATGTCGGACTCGGTGAG 3170081 28 100.0 32 ............................ TTGCTCGAATACCTGCCGCAGCAAGACATGCT 3170021 28 100.0 32 ............................ AAACTGGAAAGCCAGATGAAGACCATCAGCCG 3169961 28 100.0 32 ............................ TGCGAGTTTATCGACGACATCTGCATCTCGAT 3169901 28 100.0 32 ............................ TTTGAGTTCGCCAGCGAACTCGAAAACCGCAT 3169841 28 100.0 32 ............................ TGGCTGGTGAGGGTGCCGCCGAGGATGGCCTT 3169781 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 126 28 100.0 32 GTTCACTGCCGGATAGGCAGCTCAGAAA # Left flank : CCATCGCTCCAACGGGTGATGGACATGCCTTGGCTGACCGGCATGACGGATCATGCTGAAGTCACCGATGTCAGCCGCGTACCGACGGACGCCAAGCATTGCCAAGTCCGTCGAGTTCAGGCGAAGAGCAGCCCAGACCGCTTGCGGCGGCGTCAGATGAAGCGGAAAGGATGGACGGAGGAACAAGCGCGTGCAGCCATCCCGGACAGCGCCGCTGAACAGCTCAAGCTGCCCTACCTAACCGTACGAAGCGCCAGCACCGGGCAATCCTTCCGGTTGTTTGTTCGCCAAGAGCCAGCCAGCGGGCCTGTCCCGGACGCTTTTAACTCTTATGGTTTCAGCGGCTGCGGAACCGTAGCCTGGTTCTAACCCTTTTTTCATGCCGCCCCGTAACTGTTTGATTTATCAGATAGTTACGGGGCCCTTTTGGAAGAATGGGTCGCTGACCAAAAACGCGCCCGAATGCCCGCCGGTGCGGGATATGCTGGATGCAAAATCTA # Right flank : ATGCAGAGTGGCATGCTGGGCGGATTCAAATCTGAAGTGCAACACCTTGGTTTCAGTGGATGAGTGATGAGTGCTGCGTGGATTTCAGGAGTAATTCTCGATAGACCACGAGCGGTGATCGTACGCCCAAGCCCTTTCGGGGTCTGCCGTTGATCTGATCGGCGATGGCATCGAGTTGTTCTTGGCTGTAGACCGATAGATCGGTGCCTTTGGGCAGGTACTGCCGTACCAAGCCGTTCATGTTCTCGTTGGAGCCGCGCTGCCAGGGGCTGTGCGGGTCACAGAAGTACACCGCGATGCCTGTGCGTTTGCTCAACTCCTTGTGCATGGTCATCTCCCGGCCCTGGTCATAGGTCATGCTCTGGCGCATCGGTGCGGCAATGCTCAACAGCTTGTCGGTGAAGGCTTGCATCACGTTGGCGGCGCTGGCTGGCTTGAAGTCGGGCAACTTGACCAGCATCACCAGACGGCTGGTGCGCTCGACCAGGGTGCCCACGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //