Array 1 575628-576205 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCQY01000030.1 Salinibacter altiplanensis strain AN15 NODE_88_length_702164_cov_82.032196, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 575628 28 100.0 33 ............................ TCCCTGCACTCGCTCCCAGTCCTCGCTGCTTTC 575689 28 100.0 33 ............................ GAGATTATGGACACAAACCAGTCCGTTGACCAA 575750 28 100.0 33 ............................ CCGTTCCAGATGAAGCCCTCGAAAGCCCGAGAT 575811 28 100.0 33 ............................ CAACACACACACACGGGAGGCAACCCCCCATGA 575872 28 100.0 33 ............................ TCGACTGGCAAAGCCTCGGCAACGCCTCGGGGC 575933 28 100.0 34 ............................ CCCTTTCCGTCGGCGACCTTCCGCGCGGCTTTTG 575995 28 100.0 33 ............................ TTAAGGATCTTATCGAGCAGTCCGGAAAGAAAC 576056 28 100.0 33 ............................ CGCGAGGGTAAAGGAGGCTGGCCCGGTCTCTCC 576117 28 100.0 33 ............................ CTCAAGGCCAGTGGCGCCACGCTACGCGGGTTC 576178 28 92.9 0 .......................C..T. | ========== ====== ====== ====== ============================ ================================== ================== 10 28 99.3 33 GGTAACTCCGCACACGCGGAGATAGACC # Left flank : CACGAACGAACGCGGACCGCGCTTCGTGAGCCCTGTGCGTGCGCACCCTTCGTGGAGTCGACGTCCCGACGATCCCTGCACGGGCGACAGGAACCCATCGGCAGGCCTCTCGCGGGACCACACAGATGCATCGAGGCATTCCAGAAGCAGCTCTGGTGCGTCCTGTCTCAAAGCTGATCGCAGGCTCTCGCCTGGACGTGCGCAAGTCACGTTGCGGGTCCGTGCGGGGCGGGTTGCCCCACCAGGCATCTTCTGGCTTCGTCCCGAAAGAGAAGTCCTCAAGCAGACCGGGGAGTGTCCACAGAAAGAGTGCGAAAGGCTCAGTCCCACGCGGTATCAAAAGGCCCGTGAGGCTCAACGCAGCGAATCACGGTCAAGCCGGAAGGGCTCGCAAACCGCTCGGGGACGAAGCAGGTCCCCTGCCAAAATGGCTCACACACACCTTGTCTCGTACCGCAATTTGCATTATTCCCTACCCAGTTGCGACATATTGTAGCAGG # Right flank : CAATCGAAAAAGAACGGCGTTTTGCTCCGAACCAATCCCCAATGATCCTCGCCAATCTCCGATGGGCCTGCCAATTCCTCGCCAATGAGCCAGTGGACGGACCGTCCCCTCCGCACAGCGTCGCTGGTCTTCTTCGACCTGGAGACGACCGCCCTGCGCCCGGACCGCGGCGGGCGCATCTGCGAGATGGCCGTGGTGGACCCGCAGGGCGTCCGGTTCGACTGGTGCAGCGACGAGGCCCCGCCCCGCGACGACGTCGTAGCAGCGCAGCTGCCCCGTCTCCTCAATCACCTCGAAGTGGGCATCGTCGTGGGGCACAACCTGGAGTTCGATTTCCGCTTCCTCACCTACGAGGCCGAGCGCCTCGGCTGTGGCGGCCTCGATCTCCGCTTCGCCGACACACTGGGGTTGGCCCGGGCGCTCCTCAACGCCCCGGACGACTACCAGCTCGGAACCCTGCTCGGCCATTTCGACGCGGCCCCGGACGAGGAGCTGCACAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAACTCCGCACACGCGGAGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 587940-588822 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCQY01000030.1 Salinibacter altiplanensis strain AN15 NODE_88_length_702164_cov_82.032196, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 587940 28 100.0 33 ............................ TACGTGGCTAGACAATGCGCGGCGCGTCGGGGC 588001 28 100.0 33 ............................ CGTCGCCGCGAGGCAGGCTCCGACGAGGACAGC 588062 28 100.0 33 ............................ TGTGGGCGACACTCAGCGCCCGTGGCCCCAATC 588123 28 100.0 33 ............................ GTGCGCCGGAAGCTCGTTGGGAGCCTGAACAAC 588184 28 100.0 33 ............................ CTCTCAGGCGCCCTCGCCGCCGCCCGTAGTGAG 588245 28 100.0 33 ............................ CTCCCGTGCGGTCATTTGTCCTTGCTGGACCAG 588306 28 100.0 33 ............................ CATTGCTTACATCGCCCCTGCTACCGTATCCCC 588367 28 100.0 33 ............................ CTGGCAGAAGAGGCCGGGGCACAGGAGGGCATC 588428 28 100.0 33 ............................ CAGATCCTCGACGCGCTTCATTACTGATGCCAA 588489 28 100.0 33 ............................ CCGGCAGCGCGGGCGCGTCGCTCGTGATCCACG 588550 28 100.0 33 ............................ CGGCGGGCGTGACTGGCTCAACGGCGGGCGTGA 588611 28 100.0 33 ............................ GTGTGTACGTGAGGAGTCATGGGGGAGACGTAG 588672 28 100.0 33 ............................ TGTGGGCAAACGGAGACGTTCGTTTCTATTCCG 588733 28 100.0 33 ............................ TTTCGAGTCAAGTCCTGAGTTGTCCCAGATAAA 588794 27 89.3 0 .....................G....T- | TT [588818] Deletion [588821] ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.3 33 GGTAGCCCCGCACTCGCGGGGATAGACC # Left flank : GTACGTCGCCCCCACCATGAAGAAGTCCGTCCGCGAGCGGGTGTGGCGCGTGATGATGGACTGGAACGAGCTGCTGCCCGACGACGCGGGCGTGGTCTTCTTCTGGCGCAACCCCGACGCCCCGTCCAAGCTGAGCATTCGCCTCTTGGGCTGGCCGAAGAAGGAATTTGTGGAGCACGAGGGCCTGTGGCTCACGCACCGCGACCTGACGGAGGCGCACGACGTGGAAGAGCTGCTGGAGCAGGGCGAGGTGGAGGAGCCATCCATCGACGAGGACGACCCGACGCTGCCGATGCTGGAGGCGGTCGAGGCTCCGTGACGACCCCCGATTCGTTCCTTGACATTGCGATTCTTGAGAATGCCGCCTATGCTTGCCCCACGGCGGGCAAGGCCGTAGCACAGCGCAGTTTTGATTCCTCCTGCGACAGACTGTCGCCTTTTTGGCGCGATACACGGAGCGAAGGGCCCGTAGCGCCCTGGTCCTGACAAACTGTAGCGGC # Right flank : TGCGAGCACGCCCATTCTCGGGGCGGGTGCGGGCACCGGCATTTCCGCCAAGTTTGCCGAGCGAGGGGGCATCGTCCGGGACGGCCGACGACGGCAGCGAGCACAGACGGTGTGTCTACGCTCCGGCGTCCGGACTATGCCTCGCCCAGCGCCGCGGTCACCTCATCGGCCGCCTCCTTCAGTACCACCGCCGACCGGAGCGACAGGTCGCTCTCGTCGAGGAGCCGCTTCCCCTCCACGGCGTTGGTGCCCTGCAGCCGCACGATCAGGGGCACGCTGATGTCAATGTTCTTGGCCGCCTCGAGGACGCCCTGGGCCACGCGGTCGCAGCGCACAATGCCGCCGAAGATGTTGAGGAGGACAGCGTCCACGTTTGGGTCCTCCAGGATAATGCGGAAGCCCGCCTCCACCGTCTCGGCGCTCGCCGCCCCGCCCACGTCGAGAAAGTTGGCAGGCTCCCCACCGGCCAGTTTGATGATGTCCATCGTCGCCATGGCCAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAGCCCCGCACTCGCGGGGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //