Array 1 172-2477 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXII01000040.1 Arcobacter cloacae strain CECT 7834 NODE_40_length_5111_cov_130.306, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 172 30 100.0 35 .............................. ATAGGTATCATTTTACGATAAACCCAAGCGGGAAT 237 30 100.0 35 .............................. AGTTTTAATCTAAGTGTTTTTCTTAATTCTCGTTC 302 30 100.0 35 .............................. CGATTTAAAGTTAAGTTTATATCAACCGTTGATTT 367 30 100.0 34 .............................. TTTACCAATAGGTAAATTATTAAACGGTTGTTTT 431 30 100.0 37 .............................. TCATTATACTTATATTTACAATTATCAATTTCTTTTT 498 30 100.0 34 .............................. TCATATATTGTTTTTAAATCTATTTTTATATTTG 562 30 100.0 36 .............................. TTTTTTCGTCTACCATGTAAAGCAAAAATGAATATA 628 30 100.0 35 .............................. ATATTCCCAAGCTGATATTAGGAGTGACTTAAATT 693 30 100.0 35 .............................. TAGATATATACTCTTCATTCAAATTATCAAGCTGA 758 30 100.0 35 .............................. ACAGCTGTTCTTGAAGCTTTTGAAGCGTCTGGAAT 823 30 100.0 35 .............................. TTTAATGCTTTTGTATCTGTTAATATTTTATTAGT 888 30 100.0 35 .............................. GCTGGAGTGTCGTATCTTGTAGTAGTAGATGGACT 953 30 100.0 35 .............................. GCAGGTTACAAGTGGTGGAAAAAACAAGTTCCTGA 1018 30 100.0 35 .............................. TCTAAAAGTTCAACTTCTAGTAGCTGTAATCTAGC 1083 30 100.0 34 .............................. GCAGAAGAGATGATATTGATTTGGGGGATAAAAT 1147 30 100.0 36 .............................. AAGAGAAAGAAGTTACAAGTGGGTATATTCCATTAG 1213 30 100.0 35 .............................. AACCTAACTTTACAAGAAAAATTACTTTGTGAAAT 1278 30 100.0 33 .............................. CACAACAAGATAATCAAGTCGATGGACTCAATG 1341 30 100.0 36 .............................. GGGCTAAAATTTTATGCAAGTAGGGATGTAAATGTA 1407 30 100.0 36 .............................. AAAAAATATATTAGCAGTTTTAAAAAATAAAGATAG 1473 30 100.0 34 .............................. AAAGTAAACGCAGAATATTTTGCAGAAGATAGAA 1537 30 100.0 35 .............................. TTATTAAAATCTTCTTTAAGATTTAGCTTATCAAA 1602 30 100.0 34 .............................. TTTAAAGCTTCAAATTCTTCGGGTGTTAAGCTTT 1666 30 100.0 38 .............................. ACTGCAATAAAACCAAAATTTGCTAAGAAAATTTTTAT 1734 30 100.0 34 .............................. GGAGCTGTAGCAGTTGCTGGTTTAGCAAGTTCAA 1798 30 100.0 35 .............................. TGTACTAATCTTCCTGTTTTTACTAAATCTAAAAA 1863 30 100.0 35 .............................. TGCATTTAGCTGTTTAAAATTAGAAGATTCTATTT 1928 30 100.0 34 .............................. CTTTTAGAGCTGAATATGGGAATAGGTTATATAG 1992 30 100.0 36 .............................. TCAAATTTTTATTTCTGAATACAATGCACCAGATGA 2058 30 100.0 36 .............................. TCAAGATATAAATGTCTATCTCTTTTTTTTATTTTT 2124 30 100.0 33 .............................. GGGCTATGGGTCATTTATTTGTTCAATTAAAAC 2187 30 100.0 35 .............................. AGAGGGTATAAAAACAGCTATTGCAACACTTGGAA 2252 30 96.7 36 ....................A......... GTTCTTGAATATTTTAGAAAATCAAAAGCAGATAAA 2318 30 100.0 34 .............................. CAAAAACAGAAAAAAACAAACTAAATAGCAATAG 2382 30 100.0 36 .............................. ATGAATGAAGAGTTAAAAAAAGAACTAGAGAGTTTA 2448 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 36 30 99.9 35 TTGAACCTATTACATATAATGTATTGAAAC # Left flank : ATACTAATCATCTCCTTTTACCTTTCTTCATAATTATTATTTTTATGAGAAAAGAGTATGTTTTTTTAGTTTACAGGTGGGTCAAAAGTTTTCAAAATAGTGGGTCAATTTTCAGTCAAAAAATTCAGTATTGAAACTAAATAAAACAATTGTCTATATTTTTAACTGTTTT # Right flank : CTTTAATAGATGAAGTTCCCGAATTTAGGTAGTGTGAAAATAACTGTGTAAATTCAAAAATATAAATTTATTAGATAGAATAAAAGATCTATCTAATAAATTTTTTGTTCAAGGATTTACAAATGAATATATTAAATAAAGAAGAATTAGAAAGACAAATACAAGAAGGTAAAGAAATATCATTAGATGGTATTTTAGAAAAATTTAAAAACCTTCTTAGAGAATCTATCCAAACAGCAAGTGAAGTTGAAATGACTTCACATCTTGGCTATGATAAGCATCAAGAATCTTCTAATCCAAATTATCGTAATGGAACAAATAAAAAAATATTGAAATCTAAATATGGTGAAGTTGATGTTTCAATACCAAGAGATAGAGATGGAACATTTGAACCACAATTAGTTAAAAAAAGAGAAAGACTTTTAAAAGATAGTGAAGATTTAATTCTTTCACTTTACACTAAAGGAATGAGTGTAAGAGATATACAAAATCATTTCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACCTATTACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 72666-72327 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXII01000010.1 Arcobacter cloacae strain CECT 7834 NODE_10_length_108886_cov_87.9727, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 72665 37 100.0 40 ..................................... TAATTTAAAACACACTAAAAGATTTATATTGTATGTTTTA 72588 37 100.0 37 ..................................... AAACCATATCCTGGAATTAATGCAAAAATTATTGCTA 72514 37 100.0 36 ..................................... CAGATGGAATAACAATTCCCAAGTCTTCAATATAAA 72441 37 100.0 41 ..................................... TTAGAACCAGCTTCTTCACCAGCTAATACATAATCTGTTTT 72363 37 97.3 0 .................T................... | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 99.5 39 ATTCAAATACAAAGACCCGATTTAAGGGGATTAAGAC # Left flank : TTTTATCATATTTGTGAAAACTGTATCCCTAAATCTTTTGAACTTTGTAACAAAGGTGAAGTATTTGAAAAACAAGATTTTTTTATATAAAAAACCCAAAAAACGATTTGCGAACTTTTTTTGCCCATTTTTAGGCAAAAAAAGCTAAAATCGAGTTTTAAAAGTTCTCAAAAGTGGGGTACAAGTAAATCAAAATTTTAGATTTGCGAACTTTTAGTTTTTTTTAAGATTCAAAGGCTCATAAAATGGGACTTCTGAAACTTAAGAAAAGCTAAAAAATAGAAAATCTCTAATTTTTACTTTTTTGATAAATGATTTGCGAACTTTTTTTCTAAGAAAAGTCCATAAAATCGAGATTTTTAACAATTTATTGTCAAAATCATGAAGTTGCATTTTGAAAAAAGGTATACATTTGCGAACTTTTTAGTAAATAGCCATAAAAAGGGATATTTAAGAAGATTGAAAATATAATACCAAAGATGAAAGCCGATTTGATGGCT # Right flank : ATCTTCTAAGAATTTTCCAAGCTAAAGTATTATCTATTCAAATACAAAGACTCAAACAGCTTGAAACAAGTTTCAAGTTCCTATTTTTAGGAAGTGAGGTTTTAACCTCGCCAAAGAAGTTTCAGCATCAAATATAAATAAAAATGGAATAAATGTTACAATTATTGTCATTTTGACATATTTATATAAAAATGTTAAACTTTCAAATAACAAAGGAGTTCACATGGAAATTACTAATACAATATTTGAAACCCTATTAACAAAGAATAATTTTAAGAAAAAAGAATTTGCTCAATATTCAAAAATCCCTTATAATACCGTTGTTGGTTGGAGGAAAAAAGGTTATGTTCCTGCTTATGCTATGGTTATATTAAAAGATATGATTTATAGAAAAAAACTTGATGAAGAAACAGAACAAACTTTAAAAAGAAATATACAACCAATAATAAATCAGAATCATAAACTGACAAAAAATGAAGAAAACAGATTAAAATCTGTAT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATACAAAGACCCGATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 101745-108765 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXII01000010.1 Arcobacter cloacae strain CECT 7834 NODE_10_length_108886_cov_87.9727, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 101745 30 100.0 35 .............................. GCTAATGGTAACCGTTACAATAAACTTAAATTAAA 101810 30 100.0 35 .............................. CCAGTTGCAACTCTTACATTTAATGGTTTATCAGC 101875 30 100.0 36 .............................. AGAAATGAAAATCAAATAGCTACTAATAAAAAATTA 101941 30 100.0 35 .............................. TAGTATCACATGATAATATTTTAACTGGTTCAGCA 102006 30 100.0 37 .............................. TGTAAGACAATCTTTAATTAACTTTGAAAACAATTTA 102073 30 100.0 35 .............................. AGAGTTATTAAATGCTACTCATAATTTTATCTCTA 102138 30 100.0 36 .............................. ACTGATTTAGAGAATAGAAAAAAAAGATTAATTCTA 102204 30 100.0 36 .............................. TTATTTTTATATTCGAAATATTTTTGATTTAAAATT 102270 30 100.0 34 .............................. AAGACATCCTTAAAAACATGGATGAAACAACTGT 102334 30 100.0 34 .............................. AGCAATAAAGTTGAAATTACAGGAAATACAAAAT 102398 30 100.0 36 .............................. TTTACTTCCTTTATAATTAGTATTGTTTACAACTTT 102464 30 100.0 34 .............................. TCATAAAGGTTGTTGTTTAGGAAAAATGCTAAAG 102528 30 100.0 36 .............................. GTACTTAAAAGATGAATATAAAGGTGATGTAGCTGG 102594 30 100.0 36 .............................. ATGCATAGTAATTCTTTATTAAGTGATTTAGAGCTT 102660 30 100.0 34 .............................. AAATAAAGATTTATTAACAAAAGAAAATTATTTT 102724 30 100.0 37 .............................. ATAGGTAAGTCAGCAGAATATGGAGCCTCAAAAGGTT 102791 30 100.0 35 .............................. TAGAATGAAAACAATGTCTAAAACTAAAACAATTT 102856 30 100.0 35 .............................. GTTGTTTTAACTGATGAATGACCTAATACATCTCT 102921 30 100.0 35 .............................. AGCACGTAGTAGATTGAATCAATTTGAATTTATTA 102986 30 100.0 34 .............................. GCACTTAAAGCTGGATTATGTTCAATAAGTCTAT 103050 30 100.0 34 .............................. CAAAAACCAAAATCTAAAATCTCATTCCCAAAGT 103114 30 100.0 34 .............................. ATAGAATATGATTGTCTCTTTTCATTTGTAACTT 103178 30 100.0 36 .............................. TTGTTAAACTCGTTTTTAATATCTGTTTGAATTTCT 103244 30 100.0 36 .............................. AAACAAGAACGAAGATGGATTAACTTTTTATGGAAT 103310 30 100.0 35 .............................. CAACTTAATGTTAAAGAAGATGAAGCTAAGAAAAT 103375 30 100.0 35 .............................. ATGGATAAAAGAAAAAATAAGACTGTAAAAGTTAT 103440 30 100.0 34 .............................. ACAAGCCATATAGCATATCAACTTAAGAAACTAT 103504 30 100.0 36 .............................. AGGCTCTACAACTCCACCAAATGAAGATAATAATAC 103570 30 100.0 36 .............................. ACAATTATTAAGACTGGAGAACAACGTTGTAGGACA 103636 30 100.0 36 .............................. TTTTTTCGGGGTGTTTTTTAAATAGTTTTTGTTTTT 103702 30 100.0 34 .............................. CTATTTAAGCATTTTTGCCCAAAAGTGTGATTTT 103766 30 100.0 37 .............................. GAGGAACTATGAGTTTGTTAATAGTTTCAAAAAGATT 103833 30 100.0 34 .............................. GTTTGACAAACTTCCTTTTGAAGATATTAAGAGA 103897 30 100.0 36 .............................. CTAATAGCTACAGATTTTGGAGGTAACTATACAGGG 103963 30 100.0 35 .............................. CAAGGTAGGGCGGATACTTTTTATTTACAAGCTGA 104028 30 100.0 36 .............................. CTATGAAGAGGTGTTTGATTATGGAACTGTTTTACC 104094 30 100.0 35 .............................. ATTCCATAAGTTCTTTTTATTTTTTTTGTATTTTC 104159 30 100.0 35 .............................. AATGAAAACAAAGTGTTATCAAATGAAAACAAAGT 104224 30 100.0 34 .............................. AGAAGAGATAAAAGCTAATAATGAAAAACCTATT 104288 30 100.0 34 .............................. CTAGATGCAAAAGGCAATTCACTATAATCATCTT 104352 30 100.0 36 .............................. TTTGGATGAACATTATAAATATCATTTTTAGCAAAT 104418 30 100.0 35 .............................. GCCTTTGCTAATTCTCGGTGCATCCATGCGACTAT 104483 30 100.0 35 .............................. TAAGTTTTTGTATTTAAAACTGTTGGAGTTGGTAA 104548 30 100.0 34 .............................. TTATTTGTTCTTCTTTTATAAAATCATTATCTAA 104612 30 100.0 35 .............................. GAGGTTAATCATAGAGTATATAGTTTAAATGATTA 104677 30 100.0 37 .............................. GGATTACCTTACATATTCTTTAAAGATTTAGCAAATG 104744 30 100.0 36 .............................. CTATTTGAAATAGAAATAGGTGAGAAAGTTAAACCA 104810 30 100.0 35 .............................. TAATCTATTGTATTTCCTGGTGTAGCTGTAATCCA 104875 30 100.0 35 .............................. GCTTCAAGAAAAAAGCTATCCATTCGCCCCATTTG 104940 30 100.0 36 .............................. AAAGAACTAACAAAAATACTAATTGAAGCAGATAAA 105006 30 100.0 34 .............................. ATATTTAGCACTAGGTCGTTTGGGTGAGGTAAAA 105070 30 100.0 34 .............................. ATTTTTAGGGGCTTAATTATGATACCTGCTTTAG 105134 30 100.0 35 .............................. AAAATTTCATTCTGATTTTAAGATATATGAAAATC 105199 30 100.0 35 .............................. TGAACAAATAACACAAGTAAAAATATTAAAAAATG 105264 30 100.0 35 .............................. TTTAATCTATTTTCTTCTAGTGTGAATGGGTCTAT 105329 30 100.0 36 .............................. TGCAAAATTCAAGACTTTTAAAAAGCACGAAATAAA 105395 30 100.0 35 .............................. TTATGGAAGAATCAATCCAAATGGAAATGAAGATT 105460 30 100.0 35 .............................. AGTAAGCTAAAATACTCATCACCGTCCAATACTCC 105525 30 100.0 34 .............................. TCAACTTCCTCATCACTTGAGAATTCTGCAATAA 105589 30 100.0 37 .............................. TTGAAAGGTTGTAAAAACTACCATAAAATCAATACTT 105656 30 100.0 36 .............................. ACTTATTGATGATGTAGTTTTTGTATGTTCTAACAA 105722 30 100.0 36 .............................. TTAATTATAAAAACTATATTTTCATTTCTTAACTCT 105788 30 100.0 34 .............................. TCTGTAGCTTTTTCCATATATAAAGAATGTAAAA 105852 30 100.0 36 .............................. ATAAAAGTTAATGGTTTAAATGGAGTTGAGTATCCT 105918 30 100.0 36 .............................. AATCCTCTTTTAAAGGTAACATTTCTAATAATTCAG 105984 30 100.0 36 .............................. ACTTGAAAACAGATTTTATCATCTGCTAATAAAACA 106050 30 100.0 36 .............................. AATCACAATTAAAAGTGCAACAACTGGAGCATCTTC 106116 30 100.0 35 .............................. AGAGAAGTTAAAATCAGCAGGTGGGGTTGAGTTTG 106181 30 100.0 35 .............................. AAAATACCTAAATTTATTGTTTTATTAACAACATT 106246 30 100.0 37 .............................. TTGATAATTCATAAGCGACTTTTCCATAAATTTTTTC 106313 30 100.0 35 .............................. TCATAAACAGAGCAATAAGAAACATTGTTTATTTT 106378 30 100.0 36 .............................. CCATTTTTTAAATATTCAATAGTTTTTTTAAATCCT 106444 30 100.0 36 .............................. ACTAAATTAAGAGTCATAGGGATTTCCCCATACTCC 106510 30 100.0 35 .............................. TTCAATATTGAGAATGTTGGAACAGTACTAAAGAA 106575 30 100.0 35 .............................. AAGTCTATGGACATTTATAAATAATCACACTCACA 106640 30 100.0 36 .............................. CAAACAAATGTTTTTCTAGTAGTTCCAAGTGGTGTG 106706 30 100.0 35 .............................. ACAGCTTGAATTGAAATGGTATTTGAAGCCCATGA 106771 30 100.0 37 .............................. TAAGTAAAGGCTTCACCTTTTTCACCTTTTGCACCAG 106838 30 100.0 35 .............................. GAACTTGAAAATAGAATGTCATACAAAGAACTTTT 106903 30 100.0 35 .............................. AACAAAAATTAAAATTTAATCATAGAATTATAGAT 106968 30 100.0 35 .............................. TATCACCACACAAATGGGGCGAATGGATAGCTTTT 107033 30 100.0 36 .............................. TCTGTTGCGGTGTCTGTACCAAATGCAAATCTATAA 107099 30 100.0 37 .............................. CTAAGGGAATAGTTGTAATTTAACTTTCTATTAGAAG 107166 30 100.0 35 .............................. TTGATTAATTTTTCTAATAAAGTTATTTTTTCTTT 107231 30 100.0 37 .............................. AAAGTAACTAAATGTGCTCCAGCTATTAAAGTTTGTT 107298 30 100.0 35 .............................. TTTGGTTTTAAATTAACTGACATTTTAAATCCTTA 107363 30 100.0 36 .............................. TTAAACTTTGTAGTGACATATTAATCCTTTAAATCA 107429 30 100.0 35 .............................. TTTAATGCTAGATTTTCCTCTAAAATTTTAAAAGA 107494 30 100.0 36 .............................. TTTGCAAACAATATTACACCTATTGAATTAGTTTTA 107560 30 100.0 37 .............................. ATGCAAGGACTAGGAGCGTCCGAACAAATAAGCATCT 107627 30 100.0 36 .............................. TTATAAAGTGAATAAAGGGATTCATTATCTGTAACT 107693 30 100.0 34 .............................. ACAGTAGGAGCATATTGCTGATTTAACTTATTAG 107757 30 100.0 36 .............................. ATTTCTACTATTATTGACAATATAAATATTATTAAA 107823 30 100.0 36 .............................. GAGTTGATTGTTGCTATATTTATAAATTTGGGATTC 107889 30 100.0 35 .............................. TTGCTAAAAAATGGCTTATAATATTCAAAACATAC 107954 30 100.0 35 .............................. TCTGCTAATAAAACATCTACTAAATAAGAGCTTGA 108019 30 100.0 34 .............................. TGAGGTATTGAGTTTGTTCTTTTTCTTTCGCTGA 108083 30 100.0 35 .............................. ATCAATAAGTGATGAATATTATAAACTTGGTGTTC 108148 30 100.0 34 .............................. ATTTCAATGTATTTAAAAAGTTTTCTTGCTATAT 108212 30 100.0 35 .............................. ACGAAATAAAAATAAAATATAATTTAAATTAAAGG 108277 30 100.0 35 .............................. CCACAAATCACAAAAGGTTGTTTATGGTCTTTAAT 108342 30 100.0 36 .............................. TCTGTTAGTAAAGTTCTTCTTCCTAAAACAGAAAAC 108408 30 100.0 36 .............................. TTTGCAGATATTACTCTACCCAAAGAAGTTTCATTG 108474 30 100.0 34 .............................. AAGGTAAATTTTTCAAGTGCCAGAGCTGGACTTA 108538 30 100.0 36 .............................. GGAAGGGGAACATAAGCTTCAGGCATTCTACCTTCT 108604 30 100.0 34 .............................. GATTTAAACATAGATCAAATAATGAAGTGGATGG 108668 30 100.0 36 .............................. TCGATTTGTTTTTTAACATTTAATATTTTCATCTTG 108734 30 96.7 0 .............................A | TG [108758] ========== ====== ====== ====== ============================== ===================================== ================== 108 30 100.0 35 TTGAACCTATTACATATAATGTATTGAAAC # Left flank : CCCTTTAAACTAAAGGATAAAATGTGAAGAAAGATACCTTTAACTATAACTACGCTTTTTTATTTTATGACATTGCTGATGAGTTCAGTGATGCAGGAAAATACCGTGTGGCTAAGGTGTTTAAAATCTGCAAAAAATATCTCAAACATCATCAAAAATCAATTTTCAGAGGAAGCATCACCCCTGCAAATCAAATAAAACTGGAAAATGAACTTAAAAAAGTGATCGATAAAAATCTTGATTTTATTTCTATTGTCAAAGTTCCAAATGCTAAAAGTTTCAATGAAACAATCCTTGGAACAAATCAAAAAGAGGAAGAATCTATTTTTATCTGATTTTTCCAACCGATTTTATAGACATCTTAGCTTACACATACTAGAATATGGTACTTTATAAGTTATTTAACAACTTATTGTTAAAATTCTTAAAATGATTGGAAAAATCGCTTTAAAGTCCTATTTTTAGCTAAATCAGTATTTTAAGAGCTCGATTTTTTCTTC # Right flank : TTTTGATTGAAATTTGACCCACTTTTTTGATTAAAAATGACCCACCTGCAGATTGAAATTATAACATTAAATTTCGTTATTTTTATTCTCTAAATTTTGTTTCTTTTTACTTTTTGGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACCTATTACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //