Array 1 2613-372 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000205.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold205, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================= ================== 2612 36 100.0 35 .................................... GCTGTATTAAGAACAGCTAAATATAGCGGGTCACA 2541 36 100.0 33 .................................... TTTGCAGTGGGTGTCCGGACGGGGCAGGGGTGA 2472 36 100.0 33 .................................... AAATTGTTGGCTCATCTCCTGCCGCAATTTTAT 2403 36 100.0 35 .................................... CAGTTCTCCAGGAAAACCTTGGCTTTGCCAGAATT 2332 36 100.0 39 .................................... CCTAGGCCTTTCACTCAGATTGATCTGGGTTACTTTTGC 2257 36 100.0 113 .................................... TCTTTATCTGTTCCTCATAACACAGTAGTATGCTGTGTCAGCGTAGTCGTACGTTACATGGGCGGCATTTGCGGCTGCTTGCGTAATATCTGTACGGGTTTTTCCTTGAGGCT 2108 36 100.0 43 .................................... CATTCTGTATAGCGCTGGTGTGATTTCCGCTTAGGGTTGTTGA 2029 36 100.0 35 .................................... CCAAGCCAAGCAAGTTAAAATGTAGTCAAACATTG 1958 36 100.0 37 .................................... TGTTATTCTCATTTATACAACAGAAGGCACACACTTT 1885 36 100.0 35 .................................... GATCTGCAATCGCTCCAACCGCCTTAGAAACTGAA 1814 36 100.0 39 .................................... ATCAAGGGAGTAGCAAATTGATTACTCTACAGTAACCAA 1739 36 100.0 39 .................................... AAACCGTTAGAAAGTGGAACAGTAAGATCATTTCCTCGA 1664 36 100.0 36 .................................... GTTTCTGGGCTTTCGGCTTCACAGCCGTGTTGTTGG 1592 36 100.0 49 .................................... TTGAGCAAAGGATTGACTCCTTAAAGCTTGAAAGACCTGAAACTGAAGA 1507 36 100.0 39 .................................... TTTTTGATTGTCTGAAGGCAAGAAAAATGGCCACCCCTG 1432 36 100.0 38 .................................... CATAAACTAGCTTTAATCGACTATGAATTGACTAACCC 1358 36 100.0 39 .................................... ATAGTTTTAACTATAAAAACTTTCCCTTCTGCTGGAGTT 1283 36 100.0 35 .................................... TTGTTGTTTCACTTTTGAAACTCCATCTAAATTAA 1212 36 100.0 33 .................................... TCTTCATTTCCAAATTTTACTCTGATAGGGATT 1143 36 100.0 37 .................................... TCAGACACATTGGCATACGCACCTGCTGAACTGTTAC 1070 36 100.0 36 .................................... TTTGTAGCATCCGTCTGGATCGCTGCACTCACCCAC 998 36 100.0 36 .................................... GTAGGATCAGTTGACAAACCAATCGCACTAGCACCA 926 36 100.0 37 .................................... GTTTTCTAACTTTCCAAATTCACCTATACCACCTCTA 853 36 100.0 39 .................................... CTTCTAAATTTACTACGGCAAACGTTCCTAAACCTAAAA 778 36 100.0 36 .................................... GATGGAGGAGATGTTCCTCCATCAGCGACTAAAAAA 706 36 100.0 44 .................................... ACATAGATTTGGTCCTTGATTTTGTTTTGACTTTTTACGATCTA 626 36 100.0 38 .................................... GTTAAATTCAAGAGTCTGGTTGACTTTTCCTGCCTGAG 552 36 100.0 38 .................................... AAAAGCACGAGCTTCTATTACACTTTTAAAATCCTGCT 478 36 100.0 35 .................................... TAGACATTTGTTAAATCTCCTAAAAGATTTGTAGA 407 36 91.7 0 .................................GTT | ========== ====== ====== ====== ==================================== ================================================================================================================= ================== 30 36 99.7 40 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TGCTTAAATGTTAGTTATTGTTGTGTATGATATTTCTGACGACAAAAGACGTTCAAAACTATCCAATTTTTTGGAAGGTTATGGGCAAAGAATCCAGCTTTCAGTTTTTGAATGTTTTTTGGATTTGTCAGAAATGCGGCAACTTTACGATGATGTCAAGAAGCGGGTTAAGGCATCTGAAGATAATGTGCGGTTCTACTGGATTTCTCAGGAGGCTGTTAATAGAGTGCTAACGATTGGTGGTGAATCTCCCAAACCACCGCCAAAGTATTATGTAATCTAGGTTTGGGGAATTTTCAGAGGTTTTGTATCAGCTTCATCTACACACCTCGGCGAATCGCTGAAACCCTATGTTTTTCGTTGAGGTGTGTCGATTGCTTACAGGGAGAGGTTTTGAGGTATGTCATACACCAAGTTTTTCGGGAGGATGTACAATATTTTTAGAGGTGTGTCGATTTGGCGGCTGAAACCCTTACTGGGTAAAAGCTCCTAGACGAACT # Right flank : TAAAACCCAAAAAAAAGCCCTCTAAATGGAGGGCTTCTGTCTGCTTAATAACATCGCTATAGCTTATCTAAGCTGCATCAAATTTCCTATACTTAGCGAGCTTGTATTGAATATCATCCAAATAAATAACTTCATCAGCTATTTGAGAAAGTTGCTCACTCAACATACTCTTCTTAGCAACAACAGTAACCTTCACACCGCGACGCTGAACTTCTTCAACAACTGGAATAAAATCTCCATCTCCACTGACAAGAATCACATCATCTCCTTTTTTAACTTCGCCAATAATATCAACAGCGATTTTCACATCGTCACCGACAGTTTTAAAACTTTTACTATCAGGTCGCGCTAAGATAGGAAGCCCGATAACTT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 26264-25867 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000021.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 26263 36 100.0 37 .................................... AGGAAAAGAGAAAGAACCAAAATAAGCTTCCCTTATA 26190 36 100.0 36 .................................... CAATTACACTGGGAAATAGAGCTTGATTAAGTTCTT 26118 36 100.0 36 .................................... TCTTTGTCAGACTTGTCAAACATAAACGCGAAGTGC 26046 36 100.0 37 .................................... AAGGGTTTTTGGAAGCGTCTTGGGCGAGAGATCCGTG 25973 36 100.0 35 .................................... AAATCGACTCCAGCGTAAGAGCGCTCCCTACGTAA 25902 36 91.7 0 .........T....................A....A | ========== ====== ====== ====== ==================================== ===================================== ================== 6 36 98.6 36 GTTCTTTAACATTAGATGTCGTCAGACGTTGAGCAG # Left flank : TGTTTAGGTGAAAGTCGGGATCTAGTCAATACTGTTACCCTTTTACCTGAGAAGTATCATAGTGAGTCTTTGTGGTGGTTAGTTACAGATGAAGATGGTTCGCTAACCTTACCCTATTGGGTTGACCATGTTGGGTCTAAGAGAACACGCTGGCAGTGTTATGAGCTTCAAGAGTCCCAAGTATGGCAACCACCTGATTTATCGTGGACTACGATTCAAACTAGTTGAAAAATGAGGGTATTTAGATTTTTACAAGGATATCTACTTGTTGAGCCGACATAAAGAGATAAAAAGTCGGTATTCTTTACTGAATCAGCAATTCAGCGTTTTCATTATGATTAAGGATGCTTGCAATTCCTCAGAAAGTTCCAACAATAAGCCTTCTGGGTGTTGTTAAGCTAGCCTAGCCCATTAAATTTTGCAAATTTAGTGCCTCCTAATGATAGGTGCTTGTAAGATTATGTAGAAGACCTGATGGATTAATATGTTTAGCCATCGCT # Right flank : GATTTTCCTGCTCGTTGCCATAGCTTAAGTAAGTGGGCATAATAAAACCACACTGTGTAAAGAAAAGTAAAGAAGGCTCAAACTCTTTTTCCCCCTGCTCCCTGCCCCCTGCTCCCTGCCTTATCCCAACGATAATTATTTACGCCTACCTACTTATACTTCAAAAACAATTTTTGTGCGGATTTGTTCCCATTGCTCAATCTGCTTTTGTAGTTGCAATTTACGATCGCCCTCAACTGCACCAAGACCAGTAAACAAACCCTGATCGTTCAACTGATCGCTGTAAATAGCAATCAATTCAGTCAGTGCTTTTTTATAGCTTCCATCTCCTCCTCAGTGAAGGAATTTACATCTAGGCAAATCAGTCGTCTGCCAATTCTCTCCACAAGCTCCGACCTGCTGATATCAAAATTGGAGGCGATCGCATCTAATCCTTCAATACCAGTGGGAGTAAGGGCTAGGTTAACCCTTTTCTTCACCTCGTCGTACATCTCTGGTAC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTTAACATTAGATGTCGTCAGACGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 10727-9902 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000210.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold210, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 10726 37 100.0 36 ..................................... GTATAAGTGGTGGTAGTGATGGCAATAAATCAGAAT 10653 37 100.0 33 ..................................... AGTTCCTTTTGAAACCTTAAACAACCTTTGCAA 10583 37 100.0 34 ..................................... GAGCCGTGCTAACCAGATGCAGAGTGCTGGGTAG 10512 37 100.0 35 ..................................... ATGTTCTCAATTATATTTTGCACCCTGACAATCTT 10440 37 100.0 36 ..................................... AAGAAAATGCATATTCACAGAGGGAATTTATTAAAG 10367 37 100.0 35 ..................................... GGGACAGCGGCAACTGGTGCTTTATTAAGATTAAG 10295 37 100.0 35 ..................................... TTTGAAGTAACTCAGATGTCGCCAGAAGACGGCGA 10223 37 100.0 34 ..................................... GGAGAAACTCCACAACTAATGTCAGTGCCAGAAT 10152 37 100.0 34 ..................................... CCGACTTCGCTCTTGGGATAGGAGCAATCCATCA 10081 37 100.0 34 ..................................... TCAAAAATTGACCCCATAGCTTCATTACCGCTAA 10010 37 100.0 35 ..................................... CTGGATTATCAGTTTGTAGCAGTTGTGTACGTGCT 9938 37 97.3 0 .........................G........... | ========== ====== ====== ====== ===================================== ==================================== ================== 12 37 99.8 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCAATTCTCAAATCTTACGGACAATGGATGCAACTGAGTGTGTTTGAATGTGATATCACTCCCACTCAGTATGCTAAACTGCGATCGCGTTTAGCAAAATTGATTAAACCCGACACCGACAGCGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAGGGAAAAATCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAATCCGCTTCTGGCTAGGTTCCTCCATCTCAAATGCGCGGAGGGGTAGGTGTACAAATCCCACAGCCTCAAAAAAGTGCTTCTATCCCAACTTCAGTAAGGCTTTCAACCCATTAGTTGCCTACTCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAAAACGATTTCAGCCTTTAAATTTTCCTGGCGCTCTTTCCAAACGAATCCTCTAATGCTATGATTGCCCTTGAACCGCGAAACTGCACCTTGAAAACTAAATACAGCTTGGGTTTCAGCCTCCTGCC # Right flank : AAAAATTGGGGAAAGGGTGGGCTTAGTGCCCACCCTAGATCATTGTCTAATTGGTACTATACAGGTGCTTCAGTAGCAGTCTTACCAACCAACATTGCAGCATTTTCCTCGCTTTCGAGGATACCAAATTCAATCAACAAATCTTCTAACTCTTCCATCTCGATAGGTGTGGGGACAGTCAGATTCTTGTTGTTGATGATCTTTGTACCTAATGTCCGATATTCATTAGCTTGGTTACTGTCAGGCGCATACTCGTTAACAGTCATCCGGCGCAATTCTGCGTGTTGCACAATGTTGTCACGAGGTACGTAGTGAATCATTTGGGTGTTCAAGCGTTTTGCCAGGGTTTCGATAAGATCGATTTCCCGGTCAACGTTACGGCTGTTACAAATCAAACCACCCAAGCGCACACCGCCAGTATGAGCATACTTGAGAACACCACGAGCAATGTTGTTAGCAGCATACATCGCCATCATTTCACCAGAGGTAACGATGTAGAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 3070-2450 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000281.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold281, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 3069 37 97.3 36 ....................................A AAAGAACCTGCCCACTGAGACCCTGTTTTGCGATGA 2996 37 100.0 44 ..................................... ATTTTTGCAAGCAGGCGATGTCTTGAAGAAAGACGAGAAGCCTA 2915 37 100.0 34 ..................................... ATTTTTGCAAGATTCAGCATTAGGGCATTTATCA 2844 37 100.0 35 ..................................... TCATCTTTTTGTGTATTTCCAAATTGCAAACCCTG 2772 37 100.0 35 ..................................... GAGCTTATAAGATAAGTAAATAAGTAAATAGCATC 2700 37 100.0 37 ..................................... GTATGCTTTTTCTATTTTGAATCAAAAATTCTCTGTC 2626 37 100.0 33 ..................................... AGAGGCGATTTAATGCAGGAACTAAAGTTTGTA 2556 37 100.0 33 ..................................... GGTAAGTTGCAAGGGATGGAGTCCGTTAAATGA 2486 37 86.5 0 ..............................AA.CTG. | ========== ====== ====== ====== ===================================== ============================================ ================== 9 37 98.2 36 GTCGCTTCTATCATTTAGAAGCGGAATTAATGGAAAC # Left flank : AAAGGTTATTTATAAAGTAAAAATAAAATATGTTTGAAAAATCTGGTGATAAATCCGGGAAAGGCGATCGCAAATCGTGGTTACATAGACAAAGCCCTGCGATCGCAAATCGTGGTTAGATATACAAAGCCCTGCGATCGCAAATCGTGGTTACATAGACAAAGCCCTTGGGGTTTGCCAGTCGCTTACTGAGGGAAACTTTGTTGTAGCGCCGATCTCACCACCTGCGCGGGTTAAAGATGTTTTACTTGCGCGAACTAGTAGGTGTTTTAAAATTTGATGAAATTTTTATTGTTCAAAAGCTTATGCCATCTAGCTTTGAGAGTGATGACTACAACATGGAGATTCGCGCAATTCTTAGAAGCTTTGCCTGTTAAGCTTTTGAGCCGATTTGCAAAAGTAATATCTTGACTAGTGAAAGGCTGAAATGGTACTTTCTTTTTAGAGTCGCGCAAAGTAGCTTTGAAACCTTTGCAATATCAGGGTTTCAAAAGGCAGCA # Right flank : TTTTGCTTTCTCATCTTGGTGTTTTCCGCAAGTCAAATAAGCTTTTGCTTTCTCAAAAGCAGCTTTGACTTTCTCATTTTGGTGTTTTCCGTAAGTCAAATAAGCTTTGACTTTCTCAAACCCCAGTTTGCTTACTCAAAAGCAGCTTTGACTTTTTGATTTCGGTAGATTCAACAAGCTGATTTAGGTTTAGCGATCGCAAATTGGGGTTACAGACAAAGCCCGCATTTCTCACAAGCAGTAGGGGCGAGTTCACAGATATAATCGCAAGAGGACTTTTCAAACATCCTCTAAAGGGTTTTACTTTCACCTTTTGCTGGATTACTACCTATTTCTACACTGGTTTTTGTAGTAGATTTTAGTGCCTTTTGACGAATCTTTTCGAGTGTAGCTCCTATTTCAGGATTTTCTTGCTTAAGAATAGCTTCACGTTCCAAATTTATGGTTTCAGGTGACAATTTACATAGTGTTTCCAAAGATATTTTTCCTTGAGCATATAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCTATCATTTAGAAGCGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 1000-674 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000245.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold245, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 999 37 100.0 34 ..................................... TAAAAGTTGTATCCGGCTATTTTAAAATAAATGG 928 37 100.0 38 ..................................... AATAATCTTCTTTTCTTTAGCAGTAAACAGGAATCCGC 853 37 100.0 34 ..................................... TACTAAAAACCTAAATAAATACCACTAATTATCC 782 37 100.0 35 ..................................... TCTATAAATCTAAAGGTAGTCCAGCTACACTTAGA 710 37 81.1 0 ...........A...................AATGTG | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 96.2 36 ATTGCAATCAACCTAAATCCCTATTAGGGATTGAAAC # Left flank : AACGTCCTCCAGAAGATTAGCCAATTTTCTTTCCGATCACATTGCCCCGCAAGGGGATGGAAACGTGATACGGTCTACGAGCGTGGTCAGGAAATCCACGTAATATTTTCTAAACCTCTTCCCCGAAAGGGGATGAAAACTTGTCTACCGCAGTCTGAACGTCAGGGGGAACTGTCCCAGTTTCCAAGACTTATTACCTCGCAAGGGGATAAAACAAAACCCTGCTAGAATCCGCCTTAAGCATGGCTTGCAATCAGACTTTTTTTGCAACAGTGCGCGGATATGTAGGTGTACAAAAATAACAATCAGCAAAAATCGCTGTATTCCTCTATGTGTAAGCATTTGAGCGCGAACGCATTTCTCAACCATCCGCGCACCTTATAGACACTGGCTTTCAGCGATTTGCATCTAGTCAATTTCCAAACAGTTGTGTTATGATTCTTGCATTCGCGCTATTGAACCTTGAAAACCAAATACAGCAAAGCTTTCAGATGCAGTCC # Right flank : CGTCAATTTCAAGCTTTTGGTTAGTGTTTAGCTTTACACCACTTCTAGCCACAGGCGAGAGCATAGACAACGCCGCCGCCGCTCCCAACACCTGCTCGTCAGTCACTTCCAGATATCTCTGCAACTGCTCCAAATTCCGATGCCCTGATATCTCCTGAATAACTCTTAGTGGAATGCCTGCGTTACTCATCGCAGATAATGCGCTACGCCGAAAACTATGCGTCGATACGCCAATTATCCCAACTTGTTTGCAAGCTCCTCTCAAAATCCTAGAGGCTGAGTCTTCGCTGATGTGTCCATCACTGCGACCGGGGAACAAATAAATCTGGCGTTGCATAAATGCGGGATGAATCAGTTAATTAGGGGTACAGCCGGGATACGTGCAAAATGGGACACGATGCAAAGTTTTGTTAACATTCTTGCAATCATGCAGACTTTATGGTTCTAATTTCACCAAAACTCACTCGCTTGATGCAGAGTATATGACATACTCTGTATTT # Questionable array : NO Score: 8.87 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAACCTAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 2840-1285 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000245.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold245, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2839 36 80.6 37 ....A.A.AGT...C......A.............. ATTCGAGTGATACCTGCCGAAATATTTCGGCAAGACA 2766 36 80.6 37 ....A.A.AGT...C......A.............. CCCTTGCTAGACTCTTTGATGATCAAGCCCGCCATCG 2693 36 80.6 36 ....A.A.AGT...C......A.............. TTCTTTCATTGTTTTGCTTAAATGAATTTGTAGTGG 2621 36 80.6 39 ....A.A.AGT...C......A.............. TGTAAACCAATCACATCAAACTCTGGATTAGCAGACAAC 2546 36 80.6 38 ....A.A.AGT...C......A.............. TTCAGAGTACTATCCTCAAAATATACTGGCTGAACAGA 2472 36 80.6 37 ....A.A.AGT...C......A.............. TTCATTAGCGTCACAGTGATGAAGGGTGTGCCGTCAT 2399 36 97.2 36 T................................... GTGAAATCCATCACGACAATAGACCCTATTTGCCGT 2327 36 97.2 39 .....T.............................. CGATCTGGAAAGGGTTTGCTGATCAATCGGAATTCAGGA 2252 36 88.9 37 ....A.A.A.T......................... TCTTTCCGTACTAATTTGATAAAGCTGTCCCAATACG 2179 36 88.9 33 ....A.A.A.T......................... AATTTGTTCTCTAGCCAATTTAGAGACAAAATC 2110 36 88.9 39 ....A.A.A.T......................... TTTTTATCTAAAAGACCGAGCGTTAGCTCGTCTAGCAAC 2035 36 88.9 33 ....A.A.A.T......................... TACACTGAGGCTCTTTTTTCCTAACCGCCCTTA 1966 36 97.2 35 ..............C..................... GTCAACGCCGCTAGGCACGTTCCTAGACTGCCCCA 1895 36 100.0 36 .................................... AAAAATGCTCCTTTACCCTTGACGACCATTACGTAA 1823 36 97.2 34 ........C........................... CCGATTCCAAAACACGTCGTGTAGGTTATGTAGG 1753 36 100.0 34 .................................... CCGATTCCAAAACACGTCGTGTAGGTTATGTAGG 1683 36 100.0 34 .................................... CCGATTCCAAAACACGTCGTGTAGGTTACGTAGG 1613 36 100.0 34 .................................... CCGATTCCAAAACACGTCGTGTAGGTTACGTAGG 1543 36 100.0 36 .................................... CGTTTTGTAACGTCCTCCAGAAGATTAGCCAATTTT 1471 36 100.0 40 .................................... GTGATACGGTCTACGAGCGTGGTCAGGAAATCCACGTAAT 1395 35 75.0 39 A...T.T.A-..C..T.....A.........A.... TTGTCTACCGCAGTCTGAACGTCAGGGGGAACTGTCCCA C [1382] 1320 35 75.0 0 G.....A.G.TT...A..T...........A-.... | A [1312] ========== ====== ====== ====== ==================================== ======================================== ================== 22 36 89.9 36 CTTTCCGATCACATTGCCCCGCAAGGGGATGGAAAC # Left flank : GATATTTGCAGTATGCCCACTATGAGATAAAAAACTAACAAATTTATTACAGCACCATCGAAGTTGACTTTGAGAACCCTTTTACCACTTGGTGATGAGTAAGGCGATCGCTAATCTTGGGCTAGTTCGGCTCGAAATCATTTGACCTGTGTAGTACGCTCTTAACCATTGCTGTGCGTTTGTTTCGCTTTCATGTCGTCATAGATATATTTCCCGACATCCACGCCCAAACTATTAAGGGTTTTAACAATATATTGACATTTATAGGTAAAGTACTATACCTTTTTTTCAGATGTGTTGATTACTCATCGACACCACTCGCCCGAACCTTAAAAACCCTATAACTTCCTTGACTGGTGTCGATTGCTTGCACAGCAACGTTTCCAAGCTGTGAATGACACTAATTATTGATAATTTATCTGGAGTTATTGACACTAGAAAAAGTGGTGTCGATTGGGGTATCTCAAACCCTTTACCTGTAAGGCTTCCAAAAGTGAACT # Right flank : AAAACCCTGCTAGAATCCGCCTTAAGCATGGCTTGCAATCAGACTTTTTTTGCAACAGTGCGCGGATATGTAGGTGTACAAAAATAACAATCAGCAAAAATCGCTGTATTCCTCTATGTGTAAGCATTTGAGCGCGAACGCATTTCTCAACCATCCGCGCACCTTATAGACACTGGCTTTCAGCGATTTGCATCTAGTCAATTTCCAAACAGTTGTGTTATGATTCTTGCATTCGCGCTATTGAACCTTGAAAACCAAATACAGCAAAGCTTTCAGATGCAGTCCATTGCAATCAACCTAAATCCCTATTAGGGATTGAAACTAAAAGTTGTATCCGGCTATTTTAAAATAAATGGATTGCAATCAACCTAAATCCCTATTAGGGATTGAAACAATAATCTTCTTTTCTTTAGCAGTAAACAGGAATCCGCATTGCAATCAACCTAAATCCCTATTAGGGATTGAAACTACTAAAAACCTAAATAAATACCACTAATTAT # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCGATCACATTGCCCCGCAAGGGGATGGAAAC # Alternate repeat : CTTTACAAAGTCATCGCCCCGAAAGGGGATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 11491-12114 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000118.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 11491 36 100.0 40 .................................... TTGTCCTTGAACTTTATTAATTGTAGAACAAGTGTAACCT 11567 36 100.0 40 .................................... AAGAAAAACAGAGTTTTTCTGTAAACTAGAGGATCGTCTA 11643 36 100.0 32 .................................... AATCTGTCTTAGCTGCTTTTTCAGGATTAAAG 11711 36 100.0 37 .................................... TCCCTTACCCTGTTTTCTTAACAGAATTAAATAAATT 11784 36 100.0 34 .................................... ACAATGGTAATTACCATCTCTGAATTCTCTTACA 11854 36 100.0 40 .................................... GAAAATAGACTAGCAATCGCTAGGGTCTTAACGGTCTTAG 11930 36 100.0 36 .................................... CATAGATCCAGCGTAAGAGATTTTTTCACTACTGAA 12002 36 100.0 41 .................................... AAATAGAGGTTCCGCATTTGCAATAGAGCTATTTAAGAAAA 12079 36 88.9 0 ..............................ATC.T. | ========== ====== ====== ====== ==================================== ========================================= ================== 9 36 98.8 38 CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Left flank : AAATTGATAACAAAGGTCGGATTAATCTCACCCGCTTGGGTATCCACCCAGATCAAGCAGCAGCAGCACGAGAAGCGGCGGCGGTGAATCGGTAACTCGATTTGGGATTTTAGATTTGATCTAAAATCCGCGATGCCTACTGTGAAGGCATCGCTGTTTGCTTCTCTAATTAGCTTCCAAACTGTTATAGATAAATTTACCCCGCTCACAATTGTTAATTTATTTATTAAATACTTGACAGGTTTAAGGTAATATATTTTACTGTTTATTCAGTGTGTTGAAGTTCATCGACACCACTCCTCAGAACCTTGAAAACCGCATAACTTCTCTACGAGACGCTGCGCGAACGTTGACTGGTGTCGATTACTTGTACAGTAAGGGTTTCCGGCTAAAAAATCCATCTCTTATTGACAATTTTATCGTATTTATTGACATTATTAAAAGTGGTGTCGAATAGGGGGTCTGAAACCCTCTCCTAGTAAGGCTTCCACAAGTGAACT # Right flank : CTGAAACTCAGTGAAGACAACCAATTCAACGCTAATTAATTATTGATATTATTCTGCCAACCCGTAGTTGAAGTATTTAAAAATACATTATTTGTCTACTTACAAATTGAGCAAATTGCCCGATCGCAGCAACACAAAAAAAATGTGATCAAAAACACTTTTTCTTGTAATCAGTCATAATTTATGTAATTTGTGCAATTAATCTCCCGTCAAAAATATCATGGCTTTAGTTTCAACGATAAACAAACTGACATCAACACAAGTCCCCACACTTAATGATTGCAGTTCACAAAGCCTGCTCAACTACTTCCAAAATTCTTGGGAACTTGAAGAAACACTCATGAAAAGTTTGATTGGGGAAGAAACTTTTTATCTGAACCCCGATCCTTTAAGAAACCCTCTAATCTTTTATCTTGGCCACTCAGCCGTTTTTTTCATCAACAAGTTAATTGGCGTTGGTTTAATCAAAGCTGGAATTAATTCCCAATACGAAACCCTAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 1444-1046 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000328.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1443 37 100.0 37 ..................................... TCCTGTGTTACGAAACCTCTGTAAACAATGCAATCAC 1369 37 100.0 34 ..................................... AAAAGCATAAAAACGGCTACTAACCCAGACGTAT 1298 37 100.0 37 ..................................... GTGAAAGAAAATTAGCTTCAAACCTAGATAGCGCGGA 1224 37 100.0 33 ..................................... AGGATTAGAAGCTACAGACCTAGAAGCTAGTCC 1154 37 100.0 35 ..................................... AATGATCTTGATTACATTCTTGAATGGCTTGTAAT 1082 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 100.0 35 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : ACCAAGACTGACCTGTGTGAGCGGATAAATATCAACGGCAGTCAAATCAATCAATGGGCAACGATGCTTAACCTTGACCCTGATGAGTACCTATTTGAATTGACTGGGTGGAAGAAACCCCTTCAGGCTCGGCGGTACTTCCCGGTGTTGGAGAATGAGCAAAAGCAGCTAAATAATAAGGTATAAATACGAGGTTATTTCGGCTTTGAAGTAAAAACCCTGCTATCATGCGACTACAGCAGGTTTTGCAATCAGACTAGTTTTTTGCTTCAAAGCGCGAATGGGTAGGTGTTGGCGAGAGGGGGGGTACAAAAATGGCTGTATTGCCCTATATGTAAGCATTTGAAAGCGAGTCCATGACTCAAGCATCCGCGCACCTTATCTAGACTGCCTTCCAGCAATCTACACCTAGCCAATCTACAAACCATCGTGTTATGATTTTTGCATTCGCGCAACCGAACCTTGAAAACCAAATAATACAAAGCTTCCAGACCTAAGCC # Right flank : ACTGCATACCACCACACCCAAAACTACTTTTTATCAATCAATAAATACATTGCGGGTTTTGGAGCTATGCCGTCACTAAGCCACTCATAAAAAGACAGGATCATCGCCCGGCATACACTCCAAAACCCCCTCGTTCATTAGGACTCAGTATCTTCAAAAACCATTGGTTTCAGGTTGGTTGTGCGCTTAGAAATGCTCTTTAATAAGAACTTACTTATATGAGCCAGTCCAAAAAATGTACCTATGCCATCACTAGCATTTAAATAAAATACATAAGGAGAATCATCTCCTTCTTCTTGAGCAAACTCTTTCAAATATGTTATGTACTTTGAAAAGCAATACTTTAAATTCAAGGGGTGAATATATTTTGATTGTTTATTTGACCACATCTCATAAATTTCTGATTCATCTAGCCAAATCTGACCATTCTGTAAAATGAACCTTCCCGCCGCTTCTAATGTTTCTTCAATCCATTCATTTGTAAATTTTAAATCGGGAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 99951-100451 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000004.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 99951 37 100.0 53 ..................................... TTCTCGTTCCCGAATGGCAGATGAAGTGGGACGGGCTTCGCCCTACAGCGCAG 100041 37 100.0 42 ..................................... CCCCAGATATGGAAAGCTTTTTGCGGCTGTGCGATTGGCTAG 100120 37 100.0 39 ..................................... AATGAAGTTGTGAGTTTGTGTGATGGGAATGCCAACGGA 100196 37 100.0 37 ..................................... AATTTGAAGAACCTGCTGAAATTGCTGCAAATGCTGA 100270 37 100.0 34 ..................................... TAGAGACTTCTGGACTCTCTGATGCTGAGGTTGG 100341 37 97.3 37 ....................G................ TGCCAATGAATGAATCCGATCCCGGTTCGATCAACTG 100415 37 94.6 0 ..........T.........G................ | ========== ====== ====== ====== ===================================== ===================================================== ================== 7 37 98.8 40 GTTTCAACACCCCTCCCAGCTAGAGGCGGGTTGAAAG # Left flank : AATTAGCGATCGCGGCTTACCATTCCCGCAAAATAAACTGATTGACAAAACACCGAACCTTGATAATAAAATAAGAAAATTCAACAGCGCCGCAGTTCATGCTTGTTATAAGCCTCTGTGCTGTGTAAATTTGGGTTAGTTTGACTGCTGTTAAACAGTCTTGCTTTCTGACCCTGGTAGCTGCCCACCTTGATGCTGCTATTCCTTGTGGATAGGAATTAGGTGCGCCCCCAGTAATAGAGGTGCGGGTTTACCGCAGTGGTGGCTACTGAATCACCTCCGAGCAAGGAGGAACCCACCTTAATTATTTTTTGGCGAATCGAAGCGGGGTCAATTTCCCTGGGGATCTGCCAAAAGTTCAAATCGCTTATTGATTAAGGCTTGTAGCTTTTCTGGTGTCAGTTAATTTACTTTTTTAAGTGTTAACAGACAGGCGATTTTGGGAGACTTGCCAAAAATGCATTCAGAACTGTTGGCAAATCAAGGGTTTGGAGCGCAGG # Right flank : GTCGCTACGACTTTGGCTGTCAATGGGTATGTCCTAGTACATTAAAAGCTTTATTGAGTTTTGGAATTTTTCCAGTGTTCATAGCAAACACTTTTTAGGTGGGTTGAAAGGATAGAGCAACAGATTCTTCGTTTGAAGAGCTTGATTTTAGCTCTAATATTGAAACCGATTAGTTACCCTATAAAAGAAGAGTTCTGCCATACTTTAGGTATGGCAGGGTGTTGTAATGATATACAATTTGTCAACGCGGACAATAATTTGGCAAGACGGACAATAATCTGTCAACGCGGACAAATAATTTGGCAATCGACAACACGAGCGCGGAGGGATTTGAACCCCCGACCCACAGAACCGGAATCTGTTGCTCTATCCACTGAGCTACGCGCCCTTAGTCTTAAACATTATAGCATGTCTGTGATAAAATTTGCAGCCTAGAGAAACTTGGTTTTTGGGTTCACAGATAGTTAGCTGGGTCTACGGGTGTACCATTCCGACGGACT # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACACCCCTCCCAGCTAGAGGCGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 16767-15866 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000041.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 16766 37 100.0 31 ..................................... AGAGAACAGTGGATAGGAGATGTAAAAGATG 16698 37 100.0 33 ..................................... TCGGCATTACGGAAAGCCTGATGGAAACGGCGA 16628 37 100.0 36 ..................................... TAATGCGTCGTTTACCCCAGATTTAAACTTACTGGG 16555 37 100.0 36 ..................................... CTTTATAATGGTCGTGCCGCCAACAAGCGATAAATA 16482 37 100.0 35 ..................................... TTGATTACAATTCTTTCTCTACCTATTATTACATT 16410 37 100.0 34 ..................................... TTATGGGGAACTCAGTAAACTGATAACTGATAGC 16339 37 100.0 33 ..................................... CGTTATCCGGGATGTGGCGAGGAATACTTTCGC 16269 37 100.0 34 ..................................... GAAATCTACAAGACTTATTAACCCTGCCATACCC 16198 37 100.0 37 ..................................... CAAATTGAATCCGACGTAATTCTTCTCTAATTTCTAG 16124 37 100.0 35 ..................................... TAAAGTAATCGGTAGGGTTTATCCCTACCATATAG 16052 37 100.0 39 ..................................... GCAAGGTAAAATCCTGTACTCACCATTTATGCCACACAC 15976 37 100.0 35 ..................................... CTATTGGCACTACTGTTGTATTATCTCTATGCCAA 15904 37 86.5 0 ..........................C.A...T.G.T | C,G [15871,15878] ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 99.0 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCGCTAGAAATAAAAGAAAGTCTGTAGTGGGAGCATCCCAAATGTGCAAGTTTAAGTTTACATACGGAATTTTGACTTACCTTGGAGGATAAAAAACGAACCGCATTCGCGCAGCGTCTCGTAAGAGTTGGACACAAAGGACACAAAGGGAAGAGGATTTAAAAGGGTTTTTACGTCAGTTCCGTATATTTTTGCCAAATTTGGATGCTCCCATCTGTAGTAAGCTCATAGATCGTAAACTACTTTGCAATCAGACTAGTTTTTTTGCCAAGTGCGCGAATGGGTAGGTGTTGGTGAAGAGGTTACTATAAAAATGGCTGAATTGCCGTGTATGCAAGAACTTGACGGCTGTAGAATCTTAAAGCCATCCGCGCACCTTATATGGACTGGCTTTCAGCTATTTTCGTCTGGCACAATTGCCACTCCTCATGTTATGATTTTCCTATTCGCGCTATTGAACCTTGAAAACCAAATAACAGAAGGCTTTCAGATGCCAGCG # Right flank : GCTAACTTTATGGCGATTTGGTTAAAGTATAAAATCTGTCAGAACGCATCTGAGTGCCATTTCGCCAAACTTCCACTTTTTCAGGGCTGACTAAATAATAGAAACTACCATTATCTGCTCGATATTTGCCTTGACCAATATTTAAAGCTGCAATTTTTATCGGCTTGCTTGGGTCTTGCTTCAACTGCCCAATATAAAATAACTGACCATTTTCTTCACATACTTTTACACGAATATTTGCAGTCTCACCCTCAATGATGATAACTCCATTACACTGAATATTATTAATAGGTGCAAAAGCTATTGGAATTAGCTGTGAAGGTGAAGCCTGCTTTGCTACTGGGCGTGTCGAGACTGGGTGGTTAGGGTTATCAACTTGTTGAACTTTAGAAGCAGGAAAAACACTTGCAGTTAAGGATGTCAACAGACGAAGGGGATCAACTGCTATTTGACCATTTGGATGAACTTCAAAGTGGAGATGAGGTGCTGTACTATTGCCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 63607-64074 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000041.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 63607 36 100.0 38 .................................... CTTTGAAGTATCACTAAAAGTGTCTACGTATGTCTGAA 63681 36 100.0 33 .................................... TTCATCACGGATTCGCTGGTAACTCCGGTAGAA 63750 36 100.0 41 .................................... TGTTTGCGGTGACAACGGCGTAACCAACTAAATCAGACTCA 63827 36 100.0 34 .................................... GAGATGAATGAAACCATTTGATAGACAAAGCCAG 63897 36 100.0 37 .................................... CGGTTGGCTATGTTATCTCGTGATTTCAAATTTAATT 63970 36 100.0 33 .................................... CTCTTTTGTGAACTCATGACCATCTGCTTTTAA 64039 36 97.2 0 ..........C......................... | ========== ====== ====== ====== ==================================== ========================================= ================== 7 36 99.6 36 CTTTACCGATTGCTCTAAATCGGAATTAATGGAAAC # Left flank : GATTTAGGTTTGGCGATCGCAAATCGCGGTTAGATAGATAAAGGACTGCGATCGCAATTCGTGGTTACAATGGCTAAACCTGCCTGGGCTTTGACCTCTCTCCAAACCTCTCTCCTAAGAGGAGAGAGGCTTTGAATTTTACTCCCCTTCCCTTGTAGGGAAGGGGTTGGGGGTTAGGTCTGTGTTCTATGCAATTGAGAACTGCTAGCTATATAATCTTCTCGGAAAATTTGAGGAGATAAATACCTTTTCATGTATGATGATTTATGTCACACACAGGCACGGAGACGCAGAGAGGATGAGGAGTTTGAGATGTTCATCGACACCACTCGCCAAATCCCCGAAACCCTATATTTTTCGTTTAGTGGTGTCGATTCATTACTGGGTAATAATTTGAGGTATGCGTGTTGTTCAATTTCACACAAGATATATAATGTCTTTTAGAGTGGTGTCGATTTGGTGGCTGAAAGCCTTACGGGGCAGAGGCTCCTGAACGAACT # Right flank : CTAAAAACAAAGTTCCAGTTACACCTACCAAAGCAACCTTGAATTACGAATGACGAATTATTTCGTCATTCGCTTAAAAACCCTAGACAACAAACAAAAAACAGCTAAAAGTTAAAGTAGAAAAACCTTTAACCTGTAACTGCTGATGATTTGTCACTTCCTCATCGGTATCCCCGGTAGCGGGAAATCTACCTTCGCCGCAGAACTCGCCAAACTGGGGAATTATCGCATCGTCTCTACAGACGCAATTCGCCAGCAACTCTACGGCGATGCAAATATTCAAGGTGAGTGGAATCAGGTTGAAGAAAAAGCGATCACGGAAATTGTGAATGCCTTAACTCAAGGTGATTCCATCATTTATGATGCAACTAATGCCAAGCGGGGATGGCGGATGGATTTACTCAGTAAGCTGAAATCTTGTCTGGCTGTTTTTCCTCTGTGGATGGCGTGGTATTTGCAAACTCCCGTTGCAATTTGCAAGTTATGGAACCAACAACGGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACCGATTGCTCTAAATCGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 59364-58971 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000046.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 59363 36 100.0 34 .................................... AAAATCTGTTTTGCGGAATTTACCTTTTCGATTG 59293 36 100.0 38 .................................... TGTAAGGCTGAGAGCAACACAACCAACCAATAAATGCG 59219 36 100.0 34 .................................... ATCGTATCCTTGTTCTTTCAAAATGTAATTGGAA 59149 36 100.0 37 .................................... CTGCTTCGTTCTTTCCTTTTTGAAGGAAAATATCTCT 59076 36 100.0 34 .................................... GCTGAAATTAATGTTATCCAACCCCCCTCTTTGA 59006 36 97.2 0 ...............................A.... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 99.5 36 CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Left flank : CTTATCTAGATAATGAATTTGAGATTGACGCTAAAGAATTTTTCAGCCTCGACCGGGGAAGGGATTTAGACACTGATGAGCGTCTGTGGGGTTCCATCGCTGGGCCATTTCACTTTGTCCGATGGGCGAATTTTGCTGATGAAGTCAAGCTAATTAACGCGCTGGATGCTCACAGTTAGCCGCTTGTGGGTAGATGTTGGTGAATGTCCATTTCACGACATTCCCGTTTACAACTGTTAATTTATTTATTAAATACTTGACAGATTTTAGTAACAGATTTTACTGTTTTAGCTAAGTGTTGAAGTCAATCGACACCACTCCCCAGAACCTTGAAAACCGCATAACTTCGTTGACTGGTGTCGATTACTTGTACAGTAAGGGTTTTCGGCTAAAAAACCCCCTGCTTATTGAGAATTTTATCGTCTTTATTGACATTCTCAAAAGTGGTGTCGAATAGGGGGTCTGAAACACTTTCCTAGTAAGGGTTTCAAAAGGTAACT # Right flank : CTTTCTTTACTTTATCTAGGCGCATCTTATAACAGAAAGGGTAAGCTGTTGCACGTTTAACTTGTATAGTTAGGACGGGCAAGATGCCCAGCCCACAAGAGTTTGATTTAAATTAGGACTTATGCACTCGTGAGGACAAACTAAGCCTTTGCGATTACAACTCTTGGAGACGCTCCGCGTAGCTTACTTCCTCGAAGGGGTACGTTTCGCTCGTAATGATGTAAAATCTTAGTCCGTGCGTAAATACTGTAAATTATCCAATTTAAATATTTTTCAGCTTCCAAGTACTGAGTAATTAACATTACTGAATTGCTACAAGACCAGCAAGTACCAAGCGCCATACTTGGGCAAAGTCCCTATCGATATCTGGATCGCTCCATTCGGATGCGTGGGCTGGATGGTGAAAGCGAACTGTCGCTTGAAGGACTGCTTTAGCTGCTACTTGCGAATCGGTTACTCTAAACTCGTTAGTGGAAATACCGCTCTCGACGATCGCAGCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 47663-48354 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000013.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 47663 37 100.0 36 ..................................... GTTCTTGTCAACCCCAACTTGCACAAATTCTTCATC 47736 37 100.0 31 ..................................... AAAAAAATTCTCACTCCTGAAGAACTGACCA 47804 37 100.0 43 ..................................... CAGCTTGCTTTTGAGTGGCAACAAAATGAGAATGCAAAATCAA 47884 37 100.0 35 ..................................... AATTTTCTGTTGTTGTTTGCTGCCACTAAATACAG 47956 37 100.0 33 ..................................... AAGTAGCCATTAATTATGCTGATTTAACTAGAG 48026 37 100.0 34 ..................................... GAATATTTGAGTTTAAGGTGTGGAAAAATGGCGA 48097 37 100.0 34 ..................................... TTCCCAGCTACGAAGCCTATTCCATACTCGTAAA 48168 37 100.0 35 ..................................... AGTATCTCAAGACTTGGGACATTAATGCACATGGA 48240 37 100.0 38 ..................................... CCTTCTTATAATGTATTAGCCGCAGATACAACATTAGA A [48262] 48316 36 89.2 0 .........................-.T....A...G | CC,A [48346,48349] ========== ====== ====== ====== ===================================== =========================================== ================== 10 37 98.9 36 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCCCTTCTTTTTCGATCCCAATTTCGATGTAGAAGTGAAGCCGATTCAATTAGATAATATAGTGGCGAATGATAATATAGGCGATCGCTGGGATAAAGCTAACATTCATGATTTTCGCGGAACTTACGGCGATTATGTGTTGAATAAGGTGTCTAAGGTTTTTCCAGAATTGCGGCGAACAGTATTATAGGGTTTGAAGGCATTTTTTTTGCTGAGTCCCCTTTTGGTTAGGTTTCTGTATTTCAAATGCGCGGAAGGGTAGGTGTACAAATTTCACAAGCCCAAAAAAGTGCTTCGATCTCAACACCAGCAAACATTTCACCCAATCATCGCCCAATTATCATCCGCGCAATCTCTGAAATGCTTACAAAAAGTGGGTTTCAGCCTTTAAATTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCAAGAACCGCGCAACTGCACCTTGAAAACTAAATACAGCCTAGCTTTGCGGCTTCCGCC # Right flank : GGCGAATCCCTCTCTACTGGAGTGTAGAAAGGGATTTATGGGGTATTAATACCCTTTCTTTTGACTCCTAGTTTAAATTATTTGCTTTATCAACTGCTTCCTTTAACTCTTCAAAAGTAATACTACCGTCTTTGTCTGAATCATAATTTACTAGTAATTCCTGGGGACTAGTCGTATTTGTTTCTGATGAGATGATTGCACTTAAGCCAGGACTTAAAAAAAGATCGTTAATGGAGACTTTGCCATCTCGATCGCTATCTAAGATATTAAAAAGAGATTGAAGCTCTTGCTCGGTTGTCATAAGTTTCTATCTGAATTACTTTTTCAATTTAAATTTAATATCTCAAAATCTTGACAAAGATGCAAGGATAGTGAAGACAGTCAAGTGTACAAATGTAGCAAATTTAACGCTACCCAGTGTATATAGTGATAGCGTCTCAAACGCGATACTTCCAAAATCTCCCTCTAATTCAGTAATATCCTCTCTGATTGTCGCTAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 10163-9249 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000058.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 10162 37 100.0 37 ..................................... CAAGCTAAATGCACTACCAGTGCCGTTGCAACATACA 10088 37 100.0 38 ..................................... ATTGCATCATAGGAAGGTAGTTTCCCAGTGAACGGGAA 10013 37 100.0 34 ..................................... GATACCTATCTTGCGCATCAAGCGCTAGCAAATC 9942 37 100.0 34 ..................................... ACTTAAAGTGACACTTTCAAAAACAGGTATACCC 9871 37 100.0 36 ..................................... TCTTCGGTTGGCTCATCCCCAAGGGATCGACGAGAG 9798 37 100.0 35 ..................................... ATTTGAGTTTGAGACTAAGTTGCCTAAATCCCAGT 9726 37 100.0 36 ..................................... ATCACGATCTTTAATATATTCTCTAACAGCATCCAA 9653 37 100.0 37 ..................................... CAATAACCTCGACATCAACATCGATGTAACTCATATT 9579 37 100.0 37 ..................................... TGATGCTGAATCTTATAGTCATGCTGATGATATTCGC 9505 37 100.0 34 ..................................... GAAGGCCGGGTTTGAAAACAGACCTAATCCAAAA 9434 37 100.0 35 ..................................... TTATTCAAACGCTGCAAGAACTCGGACGATTCGAG 9362 37 100.0 39 ..................................... ACAAAATACAAGGAAGTAGTGATATCACGAAAAGGTGAC 9286 37 86.5 0 ...........................A..C.CT..G | T [9256] ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 99.0 36 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TGTTCTCTCTGTTATTCATAGAATTAACAGACCTGATACGCAATTCTTCGCTGGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGAGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGCCAAATAAAGTTGGTCATGGGGGTGCTGGTATTGGGTAGGCGTAGCCCAACCCAGGCATCGCCCTAGAGTTAGCTAAACTAATCGAGTAGGATATTTTTATGAGTAATCAGCTTTTCAATGAGATTAGTTTTTTCGCTAAATGCGCGGATGGGTAGGTGTTGGAAAAAGGGTAACTAGAAAAACGGCTGAATTGCCCTATATGCAACAATTTCAGAGCGATCGCATTTCTAAACTATCCGCGCACCTTATGGGGACTAGCTTTCAGCCATTTGCCTCTAACCAAATTCCGACTCCTCGTGTTATGATTTCTCTATTCGCGCAACCGAACCTTGAAAACCAAATAAGACAAGGCTTTCAGAAGCCAGCG # Right flank : TAAAAAAATGCCCAATTGTCATTGCGAGCGAAGCGAAGCAATCACAGCCCTTGGGATTGCTTTGCTTCGCTCGCAATGACGGGTTTTGGATCATTTATTTTTTGGAACACTCTTAGGGATTGAAACCAGTAGATTTTAATTGACTAAAACCTGTGTAATATATACTTTCCGTTGTCTTCACCGACTGAGAATCAGCGATGTCTACGACGGGCTACGCCTACGCACACTCGATTTAGCTTATAACCTGAGTTCAAGCCAGATTCAGTTCTCTTTAGATTTATATTTACGAATTAGCTTTTAAGTCGTCAATTGTATTGCGGGCGAATGCTTGACAATATTAGCTAACTCTTGTACCTGTTTTACTGCTTCAGCACCCTCCAACTTCATTAATTCGCGATCGTCCCACAATTCCATCCAAGTAATCCCGTAATCAGACACTACAAAACGAATCAGATGCTTTTCTCGCAGGCTAACCATGAATGAAGCACTCTTCATTTGGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 7159-6833 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000049.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 7158 37 100.0 35 ..................................... AAAGCCTTTATCATTTCTGGAACACTGGCAAAGTA 7086 37 100.0 35 ..................................... GTTCTTGCGATCGCAATCCCTGATTATTGTTATGC 7014 37 100.0 36 ..................................... GAGAGAGATCGTAAATTGTAACTGGCAACTATTGCC 6941 37 91.9 36 ...............................T..A.A CGGAAAATTGTGATTAAGTTCACTCCTGCTGATTTA 6868 36 73.0 0 GCTT........A....-.T...........T.G..T | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 93.0 36 CTGCTTCAATATTAGATTGCCTTTAGGCGTTGATCAC # Left flank : GGTTAGTTCAAAATGAAGAGGGTTTGCTAACTCTACCTTATTGGGTTGACCACGTTGGGTCACAGGGAACACGATGGCAGCGTTATATGCTGCAAAAATCCTTGGGGCGGCAACCACCTGAATTATCGTGGACTGTAATCCAGACAGCTTAGATAATATTCATCTCCAATTACATCTCATATTACCTTGCCCAATACAAAAAATTTTTGAGAGGTGTATTGTTTCAATCAACAAGAGAGAATGTCAGATATTTGCAAGGATACCTGTTTGTAGAGTCAGGACAAGAGGATAAAGCGTCTGTGTTCCTTGCTAAATGCAGTATTCAGCAGTTTCAAGCTGAGTTAAGGTGCTTGCAATCTCTAGAAAGACTACAGGATAAGCTTTTTAGGCTTGAAATAAGGGGCTAAACCATTTCACTGTGTCAATTTCGAGATGTTTTGCGGTAGGTGCTTGTAATCTTACCTGGAGATAGTTATGAATCAATAAGTTTAGGGATTACC # Right flank : AATAGTTAGTTCTTTACTAAAGAGCTAACTATTATGCTTTAAAAAAATCTTCAATAGAATTAGCTAAAAATTTGATTATTAATATATGTATAATGCGGTCGATTACTGGGTTAACGTCACAGGCAAGTAGACAATTACTAAAATATTTTTCTGGATTTTTTATTATTTTTGGATTAATGGCTTCTAAAAATTCTTGTCCATAATATGTCAACACTGCATTATAAAATTCTTGCTCATGAAATATAAATTTATCTTTAGAGAATACCGTTATAAAGTTTTTATTAGTTAAATAAGTCTTATAGTGACTGCGAAGCCAGGATAAACCTTTAAAAGTGAAATTATTATTAATCAGCCACTCAATATTATTAGCAAATACTAATAGTTTTTGTAGAGTTGCATCATTGTAAATTGTTGTGCTGGTGTTAAGTGGGCAGTTATCGTCACTTGGAGCATGATAATGTATTTCTTTCGTTTCTATTGATACTAAACTATTATTCAAA # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTTCAATATTAGATTGCCTTTAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 17427-16859 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000049.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 17426 36 77.8 46 A...AGGGA................A.......A.. AAGCAAAACACTTCATTTGGAACTTCAATTGGAATGCTACAGACGA 17344 36 100.0 36 .................................... TTTAGGAGAGTTATTCTATTGTGCTGCTGAAATAAC 17272 36 100.0 38 .................................... ATGGGATGTGGATTAGCTGGAGGTACTTGGTCAACTGT 17198 36 100.0 38 .................................... TGTTGATAGAGTGATTGAATCCCCTGCATGCAAGCCAT 17124 36 100.0 37 .................................... AAAACAAATGACAAACAATGCACCAGCGATCCTTACC 17051 36 100.0 39 .................................... TAAAAAAAAATGAAAATACAAACAAATTTTGCATACATG 16976 36 100.0 46 .................................... TTAGGTCGCGGGCAGCCTTCGGGTAAGAAATAACGAATACTGCCTT 16894 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 8 36 97.2 40 GTTTCCATTAATTCCACTTCTCATTGGAGAAGCGAC # Left flank : AATTACAGAAGCTTTCTGCTGCTAGCGCAGGGATTTTTTTAGGGTATAGCGCCAGTGACCAGCACAAGTTTCTTTCTAACGATAAGCAAGAACATTCCCAAGCTTGTATTACAGTGGAACTGTGGTTTAACGATGCTATGTTCCGATTTATCGCTGAAGGCACTAAGAGATTCCCTGCAAGACAAATGAATATGTCTCCACCTGTAGAGGGCGGAAGACTAATGTTACCTAAGTCAATTTTCTGCCTAAAGAAAACCACAAATAAACAGTTTCCTAATCGCTTTCGCGTGGTATTGCCTATATGGTATTTGGGTGATGTAGAGTTTCTGCGGTGGATTGTTGGTTTTGGCGGTAATGTTAAGGTAGTACAGCCAGAGGAATTGGTAGCTAAGGTTAAGGGAATTGGTGAGGCGATTCTTAAAGTTTATCAGCAGTAAGAAATAAAAATATATATTCCAAAATACTTTTAAAGGTCAGGATGTTTACATCTCGACCTTTTT # Right flank : CCCTCTTATTTAAACCCTTATGGTGTCTGATGTCCAGATGCCATTTGCGACGGGGTCGGAGAATAGAGAAATTTTTACCTTTACAGGGGAATACAAAAACGCTGAAATCCTTGTACAGAAAGACATCGGCGGGGTCAACGGAAACATAGGCATTTTCAAGTTTTGCCGACCCTGCCGCAGAGAAAGTAAAAAAACTTAGTAAATTTGTCATTCGCATGAAACCACTAGCAAAGTCTAAAACCAGCCCCTAATTTTAAGGTATAGAGAAAACACAAACAATCATCAAACATCATATTTATGTATATTTCTTCGCGTGCTGCATTAATCCGTAATCTTGGGATAGCCTTACTCAACGGTGCTATCACTCTAATTATCCTGTTAATAGCACCTTTGGGGCTAGCAGCAGTAATCATCAATACAATCTTGATCGCCGTCGCCAGCTTTGTCAACGCTACAGCAGGTGATGCTGTAGTGAATTTTTTGCAACCATCCCAAATGAA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCCACTTCTCATTGGAGAAGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 3 19714-20111 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000049.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 19714 36 94.4 38 T...G............................... TCAACGTTACGGTTAATGGTGGCAAGACGGAGGTAACC 19788 36 100.0 36 .................................... ACATGGTTTAGCCTATGCGCTGATAAGTAATTACTT 19860 36 100.0 38 .................................... AAATTTTGCTCCGGCTCTTATTGCTTTGATGATTGTTG 19934 36 100.0 33 .................................... TTGCTGGTGAAGTTGTGGCAAAGAATGTGTAAA 20003 36 100.0 37 .................................... TTAAGAATGTGTATCGGCACGCAGATGGTCACTTGGT 20076 36 83.3 0 ..............................CATTCT | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 96.3 37 GTTTCCATTAATTCCGATTTAACCCAATCGGTAGGG # Left flank : TGCAAGTTGCAATCGGGGTTTGCAAATGCCACCCCATCCACAAAACCTCTTCCCGATGCTCTGCAAGGCAAGCAACAGATGAATTTAGCTCTTTTAACAAATCCATCCGCCATACACGCTTGGCATTGGTAGCGTCATAGATTACGGAATCACCTTGAGCTATTGCATCAGCAATCTCAGAAATTACTTTTTCTTCTATATGACTCCACTCACCCTGGATACTTGCATTACCATAGAGTTTTTGGCGAATTGCATCAGTGGAGACAATGCGATAATTCCCCAATTTTGCTAACTCGACCGCGAAGGTGGTTTTCCCACTACCGGGGATACCGATGAGGAAGTGACAGATCATCAGGAGTTCAAGACTAAAAGTTTTTCTACTTTAACTTTTAACTGTTATTTGTTTGTTGTCTAGGCTTTTCAAGCGAATGACGACGGTATTAATTAAGGGTTGAATTAATTTAGCTTCTCAAACACAGAGAAGCGAAGTAATGGCATTG # Right flank : TTATTAAGGGAGTATTTTCAAAATCAGAGGTGGAAAAAACCTTATTGTCCGCATGGAAGGGAATGTTGAAGGAATGTCGGTGCTGGATAGAGGAGAAATTACCTGACTATACATACTACTGGGAGAGGGAGTGGGCAAATTGGGGAAACCACGCCTGGGAAATTTTTTGGGGAGAAGGCGACAGTATTCAAGCGGCGATGGATGATTTAGAAACCCGCAAACTTTGCCGTGGGTGGACTGCTGTCAACTGGATTGGGGAGAGTTCTAGTTTAACAGGTACGGATGGAATTGCATTTCCCGGATTAGGTGGAGAAGCACGAAATCCTAAAAATCGCCAGTGGACTATAGAAAAAGACGATATTAAAATCTTCTATAAACGCCTTGCTTGTGTATTAGAAAATCGTTCTCAAGATACAGAACCAGAAGGTAAGTTTTTTGCACTCAATGAAAAATTAAGTATTCCCGAATTAGTGAAACGTTTAGTCACGCTGCCAGAAATT # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCCGATTTAACCCAATCGGTAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 4 27389-28070 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000049.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 27389 37 100.0 34 ..................................... TTGATTTGGGTTATGCGATCGTTGAGTTCATCTT 27460 37 100.0 35 ..................................... TAGGCTGTGCTGACGCGCAAACTCACTTAGGTTAG 27532 37 100.0 31 ..................................... CAATATCATCTTGTGTGTAGTTAACATTCTT 27600 37 100.0 36 ..................................... TTAAATCAAACAATAAATGAGTTGGGGAAACCTTAT 27673 37 100.0 32 ..................................... GAGTATGAAGCGAACGACCATCAAAAAATAAT 27742 37 100.0 36 ..................................... GCTTGCTACCACTGAATACAGTTTTTGCAATTTGTT 27815 37 100.0 37 ..................................... TCCGTGTGGTTTTACCCTACTCTATTTTAGAGATGGA 27889 37 100.0 33 ..................................... ACAATTATTCCTAATAATAGGATACAAAGAAAA 27959 37 100.0 38 ..................................... TTGTCAACCGCAGTCTGAACGTCGGCTGGTACTGTGCC 28034 37 91.9 0 .......A.......A.......A............. | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 99.2 35 GTCTCCACTAACTATGTGGAGGCGAATTAATGGAAAC # Left flank : CCGGAAACTTGGAATGCGACATCCCTATTATCGGGAATTTCTATGGGTCTTTTGGCGATCGAATAATCTTTGCTATGGTCAAGGATCTACTTTTTGCTTTCTAGAGTGGAAGCTCTTGCGGCGGGGTCAGCAAAAGCGGGAAATGTTTGTTCTTTCGTTGACCCCGCCGATGTCTTACTGTCTAAGGGTTTCAGGGTTTTTATATGTATGTAATATGGTTAAATTTGGCTGTAACTTTATACCCCGTCGCAAATGGCATCTGGACATCAGGCTACGTAAGGGGTTAAATAAGAGGGGTCGCTTCTCTTCGGAGAAGTGGAATTAATAGAAACCATAGCCAGAGCGCTGGGCAAGGAATAAGGAGTCGCTTCTCTTCGGAGAAGTGGAATTAATGGAAACACTGCTTGTGCAGTATAATCTACCTGTGCAATAAAGTCGCTTCTCTTCGGAGAAGTGGAATTAATGGAAACAAAAGGGCGTACAGAATCTAAGTTAAAGAT # Right flank : CTTCTCAACTTACTCGATAAACTGAAATCCACAAATCGTCTCCATATAAATGGAGGCTAATCAATAGAAACAACAGGTGCGAAAGCTTCCCCTTTTATTTCTCCGCTGCTTCTCCTCAAGTTTGCGCCGTCACTAAAACAACAACTAAATAATCAAATCAGAATTTACTGCTCCAAAACTTCCAACTGATAAATTCTCAAAGATGGATATTCTGCCATTAAGCGCCAGCAGCAGTGTTCAGGTGGTAAAGAAGGTCTGTCATTACAACGATATAAAAATACTGGCTCATCTCTCAAAAGTCCTGTTAATGCCACTTGTTTCCAGTCCTGTTCGCCTAGATCCCAAATTAGATGCGACCTACCAAAATATCCTGCATTCATTAGACTAGCAAATAGCCACTCCATAATCTGCTGAATTTGTTGCATCTCAAGCGCACTATCACCTTGACCGTAGCATTCGATTTCAAACTTATTAGATTTTGGCTTTATCAGTCCTAGCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACTAACTATGTGGAGGCGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 5 42911-41926 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000049.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 42910 37 100.0 37 ..................................... TGTTGAACCTACTGAACCACAAATAATAAAAGTTAAA 42836 37 100.0 37 ..................................... GAATTCCTGTTGCAAGTAATGGGTAACTAAAATGAAG 42762 37 100.0 34 ..................................... AGATAACACAAGGATAAAAATGTTACCTCAACAC 42691 37 100.0 34 ..................................... CAGGCTCTTGCCCCTATTGCCCTAGCCGCTGTTT 42620 37 100.0 37 ..................................... TCAATCCCGGCATTAGCTCAAACTTCGGTTGTGAATC 42546 37 100.0 37 ..................................... CAGGCTCTTGCTCCCATTGCTTTAGCTGCCGTCTCTG 42472 37 100.0 38 ..................................... AGAAAAATAAAAGCGGCTCTAAAAAGCTTGACAAGCAA 42397 37 100.0 35 ..................................... CGACACTTATTTGGCTTGCAAACTTCAACCTAGAA 42325 37 100.0 35 ..................................... AGAACTGTAAAAAGTTCTGACATCTTTTAAACCTA 42253 37 100.0 38 ..................................... ATCAAATATCCGATTCTCGCACGCGTTGCCATAAGAGG 42178 37 100.0 34 ..................................... TACACTTCCCTTTAAATGGCACCAACGAAATCTG 42107 37 100.0 35 ..................................... AACCGGGAAGCCATTTTAATCAGTGATGGAATGCA 42035 37 100.0 36 ..................................... ATGACTGTAGCCGGGGCTTTTTGTTGGGGAGAAAAT 41962 37 94.6 0 ...................................TA | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 99.6 36 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : ATGAATAAGTTTACCGTAATATTAGCTTCGTTTGCTGTCCAAGCTTTCTTTGCTCTGTGGCTGTTGTCAGGCGAAAGCCGATGTATTGGAAAATATAGTTAGGTTTCTATCCGAATAAGGGAACTCCAAAAAATAAATTATTCAATTTGTCTACTCAACTAGACTTCTTTCTTCCTTGTCTCCCTTGTCTTCCTTGTCCCCCTTGTCCCTCTGCGACGGAATATTTTTTTACTTGGAAATCCCTAAAATGCGCGAAAGGGTAGGTGTACAAATTTCACAGCCCCAAAAAAGCGCTTCTATCCCAATTACAGTAGGGCTTTCAACCCACTTGTCGCTTAATCTTCATCCGCGCAATCTCTGAAATCCTTATCAAAAAACGATTTCAGCTTTTAAATTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTACTCAACAATCGCGCAACTGCACCTTGAAAACTAAATACAGCCGGGGTTTCAGGCTCTTGCT # Right flank : TAACAATTACCCATCTTTAGATTGAGATAGGAATCATATTTGATTTTTGAACAAAATTAGGTATTGTAGGGTGTGTTAGAACGCAGTTCGTAACGCACCATTATCGAGGGTTTGGTGCGTTATGCTGTCGCTAACACAACGCCAGTTACGCTACGCACAGTCGCTACCGCTACGCTAACGCCCAAGTCGGTAAACCCGCCCACACGACTGGCTCCCCTACATATCTTTTCTCCAAATCAAACAGGATTCCTATAAAGCAGGTTAAGATATCTGCTATTATTTAGGCGTTATGCTTGACTTCTTCGCCTGTATCACTTGCAAACTACCGCCAGAATATAAAATTGGCTCACTCTCATCAAATCCAACCTCAGTTAATAATCTAGCCAAATCAGTTTTCAACAATTGCCAAGCTGTTTCCGTCTCAAACAACAACAAAAACAGTGATATCCCAGGCCAAAATATCGGATTTGTAGGAGCGTGAAAATCTATCAGCGTAAATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 17571-17969 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000067.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold67, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 17571 37 100.0 35 ..................................... GTCAATGAGACTCGCGAAATTGTTGTTCGTCTGAA 17643 37 100.0 34 ..................................... ACAGCACCCGCAAGAGTACCCAAAGACGTAACCA 17714 37 100.0 34 ..................................... TCAGCGTAAGTACGAAACCGCGCAGGAGTACGAA 17785 37 100.0 36 ..................................... CCGATTGGGCGATCGCTATCCTTACTCGTGGTGCAA 17858 37 100.0 38 ..................................... TTAACCTAGGTCAGGTACAAGTGCCAAAATTAAACCAC 17933 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 100.0 36 GTTGCAATGACCCTTCCCGTGTTGAGCGGGTTGAAAG # Left flank : CGAGATTTAGCGATCGCTGCTTACCATTTTCGTCAAAATAAATCTTAATCTTCAGATTGAGCAAATATACTGAACCTTGACAATAAAATAAGTAATAGCGCCGCAGTTCATGTTCTTTGTAACCGCTGAACTGTGAAAAATATGGGGTAGTTTGACTATTGGAAGATAGTCTTGCTTTCTGACCCTAGTAGCTGCTCACCCTGATGCTGCTGTCTCCGGACAGGAATAAGGTGCGCTCCCAGCAATAAGGGCGCGGATATACTGCTGTAGTGGCTACTAAATCACCTCCGACCAAGGGGGAACCCATACCAATCCTTGTTTTCAGGCATTAGAAGAGATTAAAAATTTTCAGTCGATTCGCGCTTGCTTGCGGTGAAAGGGTTTTAGCGTTTAATGGCACACAAATTGCCCATTCAAACGGTAGTTGAAGAAGCATGGAATATACATCCGCGCTATCAACTCTGGAATCCTTCACAAAACAAGGATTCTATAGAGGAAGG # Right flank : GGCTTGCCATAAACCTCGTGTGTACCGGGAACGGTAGGTTAACGTGAGTTCGATGAACTTTAAAGCCTGAAACCCTTGACCAGCATATTATCTGGTAACTAACAGATTCTAAAAATTTTTGAGCTTATTGAGAATAAAATCAGTAACTCTTGAGTCTGTCAATTATTGACCTTATTCTCAACTAATGATTGAGATTTGCTATCAGCCTTAGTTTGAATAATCCTTGATTTACAAGGCTTTAAGCCTATAAAATCCGTCGAACTCACGTTAGGTTACAATGACTATTCCTGCAAAAATGGATTAAAATTTAATACTTAATCATGATCAAGAAAGGAAAAGTTATGTAAATTCTTCCAGTACAAGGCTAGTGAAAATATAAAGATTAGGAAATATTGGGTATGGGTTGAAAGGGTTCAACTCCGTCCTGCTTAACTATAAAGAACAAAATTTCTCTGTTTAAGCAAGGTAGAGTAAAAGTTTTTAGAGCTTGAGTTAAACTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATGACCCTTCCCGTGTTGAGCGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 23529-24208 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000081.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold81, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 23529 37 100.0 38 ..................................... AGGCTCTATTGGTGGTATTGAGACAGGCTTACCATCTG 23604 37 100.0 35 ..................................... ATTTAAACTGACAAAAAAACTGACAAAATAAGTGA 23676 37 100.0 32 ..................................... AAAAAAACAGTGGCGTATTAGACGACATTCAG 23745 37 100.0 34 ..................................... TGGCATCAATACAAGTTTGTGGCTCAATGGCGTA 23816 37 100.0 34 ..................................... ATAAAGTCCCCTATCTTGCCTACTATAAAACCCG 23887 37 100.0 34 ..................................... GGTGAATTGCGCCGTAGATGGGAAATACCTTGTA 23958 37 100.0 35 ..................................... AATCCTGCCATACCCGGTAAATACCATCAAGTAAG 24030 37 100.0 32 ..................................... ATTAAAACTTAGTTTTTAGCCCGGCTGATAAC 24099 37 100.0 36 ..................................... GTTGAGTGGCAAAACCACAGACGTGGGCAGCAGATA 24172 37 75.7 0 .......................G...TACAAA.TT. | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 97.6 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TCCCAATATGCCAGGAGCAGTACCTTGGACAGCAACTCAAGCACTCAATAACAGTACATTACCTTATATTGTCCAGTTGGCGAATTTAGGAATTATGGCCCTGGAAGTTAACCCAGCTTTAGCTAAGGGTGTGAATGTGCAGAATCATCGCTTAGTGCATCCGGCTGTGCAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGTATTAGGCGATCGCTTATTTTGATAGAGGTAGCGATCGCTAACCAGACTAATTTTCTTGCCTTATGCGCGGATGGGTAGGTGTACAAAATCAGAAAGGGCAAAAAATGGCCGAGGCTGCATCTATACAAGGTTTTCAGGGCACTAGTATTTTAAAACTATCCGCGCACCTTATGGGGACTGGCTTTCAGCAATTTGTATCTTGTGCTATGACTATTTGCTGTGTTATGATTCACTCATTCGCGCAACTGCACCTTGAAAACCAAATACAACAGGGCTTCCAGACCCCAGCT # Right flank : CATTCTGAATTCTGACTCCTGAATTCTGACTCCTGACTCCTGTTTCGAGAAATTTTTTAAAGCATCACCAAACTATCTTGAGTTTCTTCCTCTAATTCATAACCATTAGCGAGTTTCTCAATAGCTTGGTCAATCATTGCCAAACCTTGATCTACCTTTTCAACTAAACTTAGCTGTCCTCGGAGTTCGGCAGCACCCACAAAACCCTTAGCATACCAAGTCATGTGCTTACGGGCTTGACGTACACCGCGATCGCCTTTATATTCCCACAATGCTTGTAAATGATCTCTTGCACATTCCAAACGCTCAATCGGGGTAGGTGTCGGCAATATCTCCCCAGTTTTCAGGAAACGATCGATTTCTCCCACCAAAAACGGATAACCCAAAGTTCCACGAGAACACATTACACCATCAGCGCCAGTTTGTTCTAAACATTTCACCGCCGCTTCAACAGAAAAAATATCTCCATTCCCAATTACTGGGATAGAAAGCACTTCTTT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 193-592 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLK01000151.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 232 scaffold151, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 193 36 100.0 38 .................................... TAGCCTAACTACCAACGCTCATGAGGTTTCATCTCATA 267 36 100.0 37 .................................... AAAATCCATGTTCGATTCCTCATTATTTAGTAATTTC 340 36 100.0 40 .................................... AGGACAACTTCCTGGACAGTCAGAACAGTCAAGAATTAAC 416 36 100.0 31 .................................... CTTTCATTTTCACTTGGGACACCTAACTGTA 483 36 100.0 38 .................................... TTTAGAATCCCCCACCCTAGCACTTCGTCGACTGTTGC 557 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 6 36 100.0 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : GTCTCTTTTTTCAGAATAGCGAGCCTGTCTTTTTCCTCTGGTCATTGTCTCCAAAGCTTATGATTACAGCACTCTGATTTCTACCCTTTATCAGATTATCGTCTTTTGATAAGAGCCGCACCCTAATGATTTTTAGACTGGTGTCGATTTGGCGGCTGAAACCCTTACTGGGTAAAGGCTCCTAGACGAACTC # Right flank : CAATTAAAACCTCCTGTATCCGTAACTTGGAGCAGGAGGTTATTTTTAATGAGAACAAATATTTAACAAAATGATGATTGTTAATTTTTTCCTGATTTAAGGATTTTTATTAACTTCTTCCTCTTTACCATAGCGATATAGGATTAATTTCCCTTGAGAAGAACGACAGCTAACCCGCACTCCTTGAGTCACGCGAAAGTGGTCAATATTTCCCATGTTAGTATACTTGTCATACTGCAATCCCCCATGCTTTTTGAGAATAGCAGTATCACCATCAGAATCTTCTAAGAGATAGGAAATTTTAGCTAAAGTCTCTTGTAACTTTACCCTTGGTTGCTTCTCCTTTACCTTTTTGTAGTCAGCTTCAAATGAATCTTGATATTCTAAATTGAAGAAAGAAAGTAAATCTTCTGAAAGCAGATCATCTTTACACTGATTCCAAATTAACTGTCCCCAAGTCGAAAGTGTCATTTTCTCATCAATTTCTGCAAGCATAGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //