Array 1 47428-48655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRUK01000023.1 Acinetobacter venetianus strain LUH7437 AVENLUH7437_contig000023, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 47428 28 100.0 32 ............................ TGAACGATTAAACAAGGGCATTCGTAAACTTG 47488 28 100.0 32 ............................ GACATCAACAATATCATGACTGAGATTGTTGT 47548 28 100.0 32 ............................ AGACACATCCAACTTGAATAAGAGCTGTGCTT 47608 28 100.0 32 ............................ ATGTAATCCGCAACCGATCCGACCGTGGACTG 47668 28 100.0 32 ............................ CTCACCAAACAATTCGCCACTGCCCACGCATC 47728 28 100.0 32 ............................ AGTGCCGAAACACTGGGCGAGATAATTAACGA 47788 28 100.0 32 ............................ TATTGGTGTAGTGACAATGTCGGATGCTTCAA 47848 28 100.0 32 ............................ TCTACCCATCAAAACGCCTGAAGCTATGAGAA 47908 28 100.0 32 ............................ TAGTAACCCTCCTCAACCTGACCAACCTGAAG 47968 28 100.0 32 ............................ GTTCCGTATTGGTGACGATTACGCTGCATACT 48028 28 100.0 32 ............................ TTCCTAGGTTCGCAAGCACAAACCGACATCAC 48088 28 100.0 32 ............................ TGACAACGAAGCCCCATCGCAAAATGAAACTT 48148 28 100.0 32 ............................ CAGTCATGCACAGGAGTGGCTTTGAATTGCTC 48208 28 100.0 32 ............................ AGTATTTAGCGGTTGTATCAAATACAACGGAA 48268 28 100.0 32 ............................ AAATCAAAGCCGTTGAAGTAATGAGAGCCATC 48328 28 100.0 32 ............................ GCAAAATGCCACAACTAAAAGAAGTGTCATTA 48388 28 100.0 32 ............................ TGAAGAACAACAACCACCACAAAACGAAACTT 48448 28 100.0 32 ............................ ATCATTCGCATCAAACTCTTTTTGAATTTCAT 48508 28 100.0 32 ............................ TCAGATGTTAAAGATCAAGTTAGACGGGTAGC 48568 28 100.0 32 ............................ ACAATGAAAAGCGATATAACTAGCCAGATTCC 48628 28 85.7 0 ........................TCTG | ========== ====== ====== ====== ============================ ================================ ================== 21 28 99.3 32 GTTTGTCATCGTTTAGATGATTTAGAAA # Left flank : ATGTGGCACGCATGCGCTCATAGCTCAACTGGATAGAGTACAGGTCTCCGAAGCCTGTGGCGTGGGTTCGAGTCCCGCTGAGCGCACCATCTTCTTATTTTACTTAATCCAATTCATGATAAAAATTATTACTTAGGAAAAAATCCCCACCCCACAATCCATGCTTGTTTTAAGTTAGCAATTTTTTATGGCAATCCAAATTTAGCAAAATTGTGATACCAAAATTATTTATGAATTAATATAAAAAATTCAGCTTCCGATTGAAAATGCTTTTTTGCTTAATCATATTCTTACAAAAATAACGCTAAAATATTCATATATAATTTATTAACATGTACCCAAGCATTTACTTTTAGATCACATGTCTAGTTTTATTTTTGACTAACCCATAAAAAAACAATAAAATCAATTAATTAATAGCACATACTCTTTTTGAAGTATTTTCATTCATTAAAAATTTATCTAGTTGATTTTAGGAGTTTTGTTTATACTTAACTCTA # Right flank : GACTTGTCCAATATCAAATTTTTTTAGCTAAGCACTTTTAAAACAAGGAGTTAGCTTTTAGCAATATTATTAAGTAACTCTGGCTCTAGCATAAAAAAATCTTTCCCAAAATTTTCTAAAGGAATTTCCGAAACATTAATTTGATATTCAATATCACCATTTAAAAAACTTTGTGATTTCTGTATCGAACGTTCCCAACCAAATTCCTTTCCGCATTGCATCAGTAAATACTGATAAACCTTTACATCATTAATTTTTAATAAGAATGTGTTATCAGATAACTGGTGAATCGAGACATTTTCAAAATATTGCACATCAATCATGACCTATCCCCTAGAATGAATAATAAATGATCAATATTTATCATTATAGATAATTGATGTGATTTCAATTAATTTTCTATGATTATTAATAAGTTAAACCACATTTAAAACATAAATAACCACACAAGTCTCGATCTGGCAAAAAATGTCACACTGTTAATTATTAATAATTGCTTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTCATCGTTTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTTGTCATCGTTTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 98576-103103 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRUK01000063.1 Acinetobacter venetianus strain LUH7437 AVENLUH7437_contig000063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 98576 28 100.0 32 ............................ ACCAATCGCCATCATCAGCAGCGTGTGATAAT 98636 28 100.0 32 ............................ TTATGTTGAGCTTAAGTGTTCACCTGCAAAAA 98696 28 100.0 32 ............................ AAGAGACTTGCAAAGTAGACCATTGCAAGCAT 98756 28 100.0 32 ............................ TGAGTAGTCAAATGGTCGATAACCCTGTAAAT 98816 28 100.0 32 ............................ ATGACCCAACCAACACCTTCGATTAATGCTGA 98876 28 100.0 32 ............................ TGTACCTGTAGGATCATGTTTATATGCATCAA 98936 28 100.0 32 ............................ ACTGTGAACGTGCCGTCGCCATTGGTCCCGGT 98996 28 100.0 32 ............................ ACTCATCACAGGATGTATATGACTTCCAATAT 99056 28 100.0 32 ............................ ATTAATGACAACTGTTTTTGTTGCATTAACTA 99116 28 100.0 32 ............................ CGCAGCTTTGCGGATACCTGTAACGGTCATAA 99176 28 100.0 32 ............................ TACAACACCAATTCCATTTTCAAAATCAATTT 99236 28 100.0 32 ............................ AAAGAGGATTGAAAGCAAGTAAAGCAGGCCTT 99296 28 100.0 32 ............................ TTTGACCAGGCTAACAATAATCCTAATATTAA 99356 28 100.0 32 ............................ TTGAGGGGTCAAACTATGAAAATCACAGACGA 99416 28 100.0 32 ............................ GAACGCCACACGCGCGTGTTATGTAGGTAAAA 99476 28 100.0 32 ............................ GCTGCTGCTGCTTCTATCTTTGCCATCAAAGC 99536 28 100.0 32 ............................ ATTAAGCAAACTGCACATGATGAATTTACATT 99596 28 100.0 32 ............................ ACCACTCAAACCACCCAAACGAGCTGTAAGAT 99656 28 100.0 32 ............................ AATTACTCCAGTTCCAGTGAATATAAATTGGA 99716 28 100.0 32 ............................ TCCCGCGGCTTCTGCATCTTCTGCGAATGATA 99776 28 100.0 32 ............................ AAGCTTTAGAAGTCTTGTCTCCAGTAGCTTCA 99836 28 100.0 32 ............................ GCAATCTTTTTCCCAAGACTTGAAGCCAATAC 99896 28 100.0 32 ............................ ATTAAGCAAACTGCACATGATGAATTTACATT 99956 28 100.0 32 ............................ AATCGAATTCAGTGTTTGTGATGTCTTTATCC 100016 28 100.0 32 ............................ CAACTCGTCGGGACTTGTTAACTGCTTACAAA 100076 28 100.0 32 ............................ CCACCGCCAATAAATCCTTGTAAAACACTAAA 100136 28 100.0 32 ............................ ATTATCTAAATCAAGCAAATCATCACGAAATA 100196 28 100.0 32 ............................ ATAACTTTTGTGTTTACTGCCGCATTCATACC 100256 28 100.0 32 ............................ GCCTGCTTTATTCCAAACTAAAAACTGGTCAG 100316 28 100.0 32 ............................ AATATCTTCGACAATCTTCCTGTGAAACATCT 100376 28 100.0 32 ............................ ACACTTAGGGCATTCATAAGACAAGTGGCTCA 100436 28 100.0 32 ............................ CTTCCCTTACAATTTACCAGCAGTGGCAATGG 100496 28 100.0 32 ............................ AGTATGTGGAAAAAGCCACATTAGGTACCACA 100556 28 100.0 32 ............................ ACCCAATTTAACTTTTTTGAACTGACCACTAT 100616 28 100.0 32 ............................ CCGAGATTTCTTTGGCTGATGCAAGAGAAAAA 100676 28 100.0 32 ............................ TTTAAAAATCCCTCATGAAAATAAGAGCCACA 100736 28 100.0 32 ............................ ATCACAAAATCAACTCAAGACGGTTGGCTGTC 100796 28 100.0 32 ............................ TTGTGATGTATCAGCGGGATTTTTTGGCTTTG 100856 28 100.0 32 ............................ GATCCCGACCAACCAAACCCTAACGATCCAAA 100916 28 100.0 32 ............................ ATAATGCTGGGCAGACTTGGAATAGCCTATTT 100976 28 100.0 32 ............................ ACACTAAAAATTGGCTGTTTTGACTTAATCAT 101036 28 100.0 32 ............................ ACGGACGCGACCCCAAACAGTTAAACGACCAC 101096 28 100.0 32 ............................ TGACGCCTTACATTGCTCAACTTGGGTTGAAC 101156 28 100.0 32 ............................ CTATTGGTTGCGAAGCTGGAAACGTTGTAATC 101216 28 100.0 32 ............................ GTTATTGGGAAGATACTAAAATTAATGGTGTT 101276 28 100.0 32 ............................ TTTAATCTTGTAATCAGTCGATTTCATACCGA 101336 28 100.0 32 ............................ TCAAGAATAATCACCCCGAACGTAAGGTCTAT 101396 28 100.0 32 ............................ TCTAGATAATCAAACTGTGGATTGGGTGGAAA 101456 28 100.0 32 ............................ CTCACTCATAGGCTGAGCGGACGCCATAGTTT 101516 28 100.0 32 ............................ GTCACCTCAAATGTTTTCTAAATTTAGTATTG 101576 28 100.0 32 ............................ ATGTGGAGAATGGTGGAGAGTGGTTTTATCAA 101636 28 100.0 32 ............................ GACAAAGGTTCGCTTGAAACTAGTAGCCTACT 101696 28 100.0 32 ............................ TATGTCGAGTCACGAATTGAACAAATCATGTC 101756 28 100.0 32 ............................ TGATTGTCCTAAGATCATTGTTACAGTACTCA 101816 28 100.0 32 ............................ CATAACGCTCACCACGTTGATTTAAAGTTTCT 101876 28 100.0 32 ............................ TCGAACGACCGATCACGCAGGCGCCCCGTTAG 101936 28 100.0 32 ............................ GGGACCAATGGCGACGGCGAGTTTACGGTCAG 101996 28 100.0 32 ............................ TTGAATCATGGAAATGCAGATCATCAATTTCA 102056 28 100.0 32 ............................ CAAACGTTTTGATCGGATTGAAAGTCGGCTTT 102116 28 100.0 32 ............................ TGTCGATATCTTAGTACTTCCTCAGCTTTTAG 102176 28 100.0 32 ............................ ATCAGTCGCCGCAGCAACAATAATGTTTAACA 102236 28 100.0 32 ............................ ATTATCAATCAATTTTTTACAATCTGCTTCTG 102296 28 100.0 32 ............................ TCTGCCTGTATGACGTTGTTCGATATTTGAAT 102356 28 100.0 32 ............................ AGTCAGTTTACTGGATTGCGAGGGAGTGGTAA 102416 28 100.0 32 ............................ TATGCCAAACTTCTTAATACAGAGATCAATAA 102476 28 100.0 32 ............................ ATATTGATGTCACGTACTCAGCACGGGTTAAA 102536 28 100.0 32 ............................ CTCATGATCGATTGGTGATGTTGCCTATTGGT 102596 28 100.0 32 ............................ TAGGTCATAATTATCTACAGGTGAATAAATAT 102656 28 100.0 32 ............................ AAACGCAATAAGTTTAACGCTCAGAAAGTTGA 102716 28 100.0 32 ............................ TTTTTGTTGCAAAGTCGGCGTAATGGCAGCTT 102776 28 100.0 32 ............................ GTTGGTTTTGCCATTGGTTTGAAGATTGTTAC 102836 28 100.0 32 ............................ TCAACTCGGTCTGATCCATAACGACGCTGGGC 102896 28 100.0 32 ............................ AAAGCGGATGCTCTTTAAATTCAATTGGCGGG 102956 28 100.0 32 ............................ TGTAACCGTTGTTCCGTCATCAAGTTTGCTTA 103016 28 100.0 32 ............................ ACAACATGCGGTACTAGTCCAGCAATCGTGAA 103076 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 76 28 100.0 32 GTTCGTCATCGCTTAGATGATTTAGAAA # Left flank : GTCGATGGGCAAAAGCGTTATATAAAGAGTTGGCAAAAGGTTTTAAGTTTAATTTCACTCGCGATGAGGGTAAAAACTCCCACGATACCATTACAGATATAGCCAATAATTATCTGGATCATGGTAATTATATTGCTTATGGATATTCAGCCGTTGCCCTAAATGGTATGGGAATTAGTTTTGCCTTACCTATCTTACACGGTAAAACTCGCCGTGGTGGCTTGGTATTTGATATTGCTGATTTGGTTAAAGATGCTTTTGTCATGCCACTTGCTTTTTCTTGTGCTGCGAAAGGACAAAATCAAAAAGACTTTCGTATGCAATTGATTGAAACTTGCCAAGATAGTGATCTGTTAGATTATATGTTTGGCTTTATTTCTGAGCTATGCTCTAAAATCAAATAAAATCATAATATTACAAACACAACTTCTTTTTGAAGTATTTTCATTCATTAAAAGCTTATATAATTGATTTTAGGGGTTTTGTGCTTACTTAACTCT # Right flank : AATCGCTCACACTAATTCAAAACCCATTCTTAGAACCAACTTAGTATTTGATGTCTTCAAAGAATCAAACAACAAAGTAAATAAACTCGTTTTTGAATGTAGTTTTAGTACATTAACTCGCCAACAACTCTCTCGCTTTGCTCAACAAGTCCTGTTGATCAATCTCCGAGGGATGGAAACTAGCTTTATAAAATGCCAAATAATCAGGTAATAAACGCCACATCATTTGTGTTAGACCGACTAGCGTTTTCGCATTCTTTATAATTTGTTTTGGCTGATATAGTGTATTTCGACGATCTTGCCATACTAGATGACTTGTCATAATTACAGTACTACTGATAAACCCTAAGGTAATGGTTCTCATGCTTCGACGACGCTGAGCAAGATTATCAAAAACCTGTTGATATACATCAAATGCCACATGTTTATGTTCAATTTCTTCAACAGCATGCCAAAGCCAAAGATTTTTCATATTTTCAGATAAACCTTTGAACATAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCTTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCTTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //