Array 1 29302-32654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKQP010000031.1 Paraglaciecola agarilytica strain A3R12 A3R12_A3R12_contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================================================================================================================================== ================== 29302 28 100.0 32 ............................ TTTGTCGAAATTTGGATTTTGAATCTGAAAAA 29362 28 100.0 32 ............................ GCTTTAGATTGTTACCATGTGCTGAATATTGC 29422 28 100.0 32 ............................ AGCAAGGCCAAGGTTATCAGCAAGACCCTAAT 29482 28 100.0 32 ............................ TCAGTGAAGGACTTAACTAAGTCTTTCCTATT 29542 28 100.0 32 ............................ TGGTGAATAACGTCCTTGTGAAACTCGTCAGT 29602 28 100.0 32 ............................ TGAATAGTTGATAAGCCATATAGCTGTTGATA 29662 28 100.0 32 ............................ AAGAGCGCAGCCAATACAGGCACCATAAAAGA 29722 28 100.0 32 ............................ CACCAAGGCGCGCTAGATACACCTCGTTAAAT 29782 28 100.0 32 ............................ ACGCAAAGGTGGCGGAAGGTCGATAGTGATAA 29842 28 100.0 32 ............................ GTAATTACCAAGCATATTCACTTCGTTCTTTA 29902 28 100.0 32 ............................ TTGCACTAGCGTATCAATTGAAAAAGGCACTA 29962 28 100.0 32 ............................ TTGATGAGCAATGGCTTAAATGCTCACCAGTA 30022 28 100.0 32 ............................ AAGCAAAACGCCCTGGCATTATCTCAAAACAA 30082 28 100.0 32 ............................ GTCGGTAGTTACCGCACCTGATCCATTTAACT 30142 28 100.0 32 ............................ GTTTGAGCCAAAACCTGTCACCGCTGGGTCAA 30202 28 100.0 32 ............................ GTCATAACCGACACCTTCGGCGCGAGCTAAGC 30262 28 100.0 32 ............................ GCAAGCTTTTGCACTTGCGAATCCACAAAGGA 30322 28 100.0 32 ............................ GCAACGGGCTTTCATATCTTGATGATAAAACC 30382 28 100.0 32 ............................ ATTACGGTGATTTAATGGCTATTCAATATTTC 30442 28 100.0 32 ............................ AAATTGCGGGCTTGATACCTGCATTTGACCGT 30502 28 100.0 32 ............................ GCCCGAGGTTAAGCTTTTGGGCCCGTACCAAT 30562 28 100.0 32 ............................ AGAACGGGCCGCAACCGCACTATCTTTTGCGT 30622 28 100.0 32 ............................ TTACTTCAACGAGATAAAACGGCCAGCCTTTT 30682 28 100.0 32 ............................ TTTGAAATTGTAGGCGACATAACCAATGGCTA 30742 28 100.0 32 ............................ TCTGTGTGTGCGTTTCACTGAACTATCTCGAA 30802 28 100.0 32 ............................ ATCGATGAGCGCGGTTCGGCTGGGCTTCCACC 30862 28 100.0 32 ............................ TGTTATCTCTTTACCTGCTTTAACCAATACAT 30922 28 100.0 32 ............................ TTAACCGGATTATTCACGGATTACATGGACAA 30982 28 100.0 32 ............................ ATCCACTTAGAGCGCGATAACAGCTCGGTTTT 31042 28 100.0 32 ............................ GCAATCAGTGGGACGGCCAGACCGGAAAAGAT 31102 28 100.0 32 ............................ TTTACAGTGATACCACGATTACCCGCGCCATA 31162 28 100.0 32 ............................ ATAACGGGCACGCCCTGCACTTTTATACTGTT 31222 28 92.9 32 .........C.....G............ ACGGGGAAACCAGGGGGCAGCGCGGAAACCTT 31282 28 100.0 165 ............................ TATGATTATTCAATAACGGAGTAAACACATCCCTGATGATACTCACCCAGCCCGAGCGTCCTGCTCGGTCGTTCAATCGGGCGCAGCGGTGCTGCTAAAAAATCCGATTTCACCCACACATGCAGCTTAGAAATAAAAAGAGCACCGGCACGGGTGGGGTTTCCA 31475 28 100.0 32 ............................ AGCTCACGAAAATCAGCACTGTCAAAGAACTC 31535 28 96.4 32 ...G........................ ACTGCGCGGTTGGGACAAAAAATTATATTTAG 31595 28 96.4 32 ...G........................ GTTTCGAAGTTTTCTCTGATGAGTCAGGGGAT 31655 28 96.4 32 ...G........................ TGCGTAATCTTCAACTGTTCGGGTCATGTATA 31715 28 96.4 31 ...G........................ AAAAGAAAAGAGACCTAAACCGAAGCACCAT 31774 28 96.4 32 ...G........................ TTTCTGAGTTAGCTTGGCCTGAGTCTAAGCAT 31834 28 89.3 32 ...C.....C.....G............ TAAAAGGGTGCCTTCCTTGGCTGACGAGCTTG 31894 28 89.3 32 ...C.....C.....G............ AATCATCTTTTCTCGCCATACGTAACCTGACG 31954 28 85.7 32 ...C.....C.T...G............ TGATTCGCTGAGCTGCAGCACTTGGTCGAACG 32014 28 85.7 32 ...C.....C.T...G............ TCTACGCTATACGATAGAGTGCCATCATCAGT 32074 28 82.1 32 ...C.....C.T...G....A....... TACAGACGCCAATGGTAACTTTGCCGATGATG 32134 28 85.7 32 ...C.....C.T...G............ TTTGACCTCGATATTTTAGAAGAGCAACTAAC 32194 28 85.7 32 ...C.....C.....G........T... TCTTCACTACTGCAAAGTAATTTCTGTTCCCT 32254 28 89.3 32 ...C.....C.....G............ AGTGGTCAATGTTGTGCAGCTGCTCGTCGTCC 32314 28 89.3 32 ...C.....C.....G............ GTATGCGGTCTTGAGGGTATCAAGTAGGGTAA 32374 28 89.3 32 ...C.....C.....G............ TGTACCATTTCTGGTAACTCAGCAAGCTTATA 32434 28 89.3 32 ...C.....C.....G............ AGAACTCAGAGCAACATCACGCGCACTGTACG 32494 28 89.3 105 ...C.....C.....G............ TATGATTATTCAATAACGGAGTAAACACGTCCCTGATGATACTCACCCAGCCCGAGCGTCCTGCTCGGTCGTTCAATCGGTCGCAGCGGTGCTGCTAAAAAATCC 32627 28 71.4 0 .A.TT.AC.CA....G............ | ========== ====== ====== ====== ============================ ===================================================================================================================================================================== ================== 53 28 96.2 36 GTTAGCTGCGGCACACGCAGCTTAGAAA # Left flank : GAACGATTAAATATTCAAAAATGGTTAAATCGATTAGACGACTATGTGCATATTAAAAATATCACAGAGGTGCCTGCGAATATTGGTAGTTTTGAAAGTTTTAGTCGACGGCAAAAGTCGGGAAGCCCAGATAAACATATCAGGCGAAGAATGAAACGGCATAACGAAACGCTTGAACAAGCTAGTAAACATTTTTCTGATTATAAAATGGCAGATGAAGATAAAGCATTGCCATTTATCAAGATGAAAAGTCTTACAAGTAATGATGAATTCAATATGAGCATTGCTAGGAAAGTCACAGAGCAAAGTAGTAATCCCGTGATGTTCAATACATATGGGTTTAATAGAAAAGCGCCATTACCAAAGTTTTAACCTTTATTTTTTGCTCTTTAAAAAATCGTTATAAATCATATGGCTACAATATCGCTTAAAATTAGGGGTAAATCTCCCTATTTTCGATAAGTGATTGTTGTAGCTATTTTTTTGTCTGTTAGACTGCT # Right flank : ATATGATTATTCAATAACGGAGTAAACACGTCCCTGATGATACTTACCCAGCCCGAGCGTCCTGCTCGGTCTTTCAATCGGGCGCAGCGGTGCTGCTAAAAAATCATACTGAAGCTAGGAACCGCGTAATTGTCTCGTTCTAACAAGGCCAAAAAGTGATGACGAATCGTTTTTTAAGCACTTAAAAATTGGCCGACTTGGGATAGAGAAATATTGATAAACACGTTAGTATGCGCTGCTTGTGAGCTGTGCTTGGCGTGCGTAAACCATTGGTTGGTTAAGCATGTTGCTTCATAATGAATACACTTAATTGTACGGTTAGGTGTTGGGCGTCACAATATTATAGCAAGTAAACTTACTTTTTCATTCAAGGCAGTATAGATGAAACTTAGTCCTCTTATTTTAGAGCTAATTAATGCGTTTAAAGTGTTACCTGGTGTGGGCCCAAAAAGTGCTCAGCGTATGGCGTTTCATTTATTAGAGCGAAATAGAAGTGGTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCGGCACACGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAGCTGCGGCACACGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //