Array 1 646120-641636 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAABOS010000001.1 Undibacterium crateris strain B2R-29 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 646119 29 100.0 32 ............................. CGGCCACGGCGACGGCTGCCCAGGTTTTCAGA 646058 29 100.0 32 ............................. CATTTCCATTCCTTAATGGAATTAATGTGCCA 645997 29 100.0 32 ............................. GCTTCAGCATTTCACATACTGCAAACCCCACT 645936 29 100.0 32 ............................. CCATCGTGGTGCTACTGCTGCCACCCAGTCAA 645875 29 100.0 32 ............................. ACTGATAGAGAACTGTTAGAGCTGGCGGCTAA 645814 29 100.0 32 ............................. CTGCGTCTAGCCAAAACGCAATTAATGCAAAA 645753 29 100.0 32 ............................. CTGCGTCTAGCCAAAACGCAATTAATGCAAAA 645692 29 100.0 32 ............................. ATATACGCAAATACGTTATTGCCTTTTTCGCT 645631 29 100.0 32 ............................. CTTCCAACCATGTCGCCTTGCGGCGTAGATCG 645570 29 100.0 32 ............................. ACTCAAATGATTATAGGTGTCGTAAGTTCAAC 645509 29 100.0 32 ............................. CATGCGGCGGCGGGTTCGGTGCGTGGCGCGTT 645448 29 100.0 32 ............................. CAACCCATGTTTTTTCACCGCAATGTTGCCAA 645387 29 100.0 32 ............................. TAACGGATGATCCTTAACTCCTGACAGTTTCA 645326 29 100.0 32 ............................. GCGCCCCTCTTGCAGCATGTCGCGCAGTTCTA 645265 29 100.0 32 ............................. AATGTTCGGGCGGCTGACAAAGTACGCAGAGA 645204 29 100.0 32 ............................. TCGTCGTGGGGCAACTCAGGAAATATTCGCAA 645143 29 100.0 32 ............................. CCCATTACAAAACCACTAGGGGGACGCGTTCC 645082 29 100.0 32 ............................. TCACACAGAAATGGAAAATCAACGTGCTAATG 645021 29 100.0 32 ............................. ATAGCGGGCGCATTAGCACGTGGTATTCATCA 644960 29 100.0 32 ............................. GCTCAGGGCAGCAGCAAAAGTCTTACTACACA 644899 29 100.0 32 ............................. CCACAAGAAACGCTATTTGCATTTGCGCGGCT 644838 29 100.0 32 ............................. AAGATGCCATGAAAGAACAAGCCAAACACGCA 644777 29 100.0 32 ............................. CAGCAGGACCAGGAGCTGAAGGGCGGTGAAAA 644716 29 100.0 32 ............................. TGCAACGTCCGCGGACACACGCGCTGTTTGCT 644655 29 100.0 32 ............................. TCTTCTGCCATTGTCTCTAATAAGCTGCGGCT 644594 29 100.0 32 ............................. TCTTCTGCCATTGTCTCTAATAAGCTGCGGCT 644533 29 100.0 32 ............................. CGCTGCAGGCTGCTGAGCAGGTTTTCCAGATG 644472 29 100.0 32 ............................. TACTGCAACGCCTCAGCTGGCGTTGAAAAATC 644411 29 100.0 32 ............................. CTGAATTAATAGTCTAGCTCGTTGGTTTTGGT 644350 29 100.0 32 ............................. CCTGATATCAGGGCAAATAGGTAAGATAGGAT 644289 29 100.0 32 ............................. CGCATTGATAAGCCAGCGCCAAGCAATGAGGC 644228 29 100.0 32 ............................. TATTGGCCGGTTTTGGCTTGCCAGTAGCGGGT 644167 29 100.0 32 ............................. GCCGACAATTACCAGCGGACTACTCAGCAATG 644106 29 100.0 32 ............................. CCGCAGCCGGTACTGGCGACGCGCCCTATCCA 644045 29 100.0 32 ............................. CGATGAAGCGGCGGCGCTACAGGCGCAGGAAC 643984 29 100.0 32 ............................. CAGGTGCCAGCGTTTGGTTTGCGGCTGAGCAG 643923 29 96.6 32 ............................A GTGGGCGAACTAAAACCATGGATGCTGAGGAC 643862 29 100.0 32 ............................. GCGCCGAGCTACCTGATTACCTGGCGCAAGGA 643801 29 100.0 32 ............................. GCAAGGAACAGGCCATGTCGTCGGAACAGGCG 643740 29 100.0 32 ............................. TGGTAGTTGGTGCTGTGGTCGATATGCTGGCA 643679 29 100.0 32 ............................. CTCAGCAGTGATTTTCAGCTCCTGCGCTTTCA 643618 29 100.0 32 ............................. CGGTGAGGTAGTTGCCTCATGATGCTAGAAGA 643557 29 100.0 33 ............................. CAAATACCTGTGCAGTAGACAAGCCAGCCGCGC 643495 29 100.0 32 ............................. GTGACTGGACCAATGGCGCAAAACAAGCTCTG 643434 29 100.0 32 ............................. ATCGCCTGGTCACGCTGGCAGGTGGCCTGCAG 643373 29 96.6 32 ............................A GCGTGCCGCTGACATTGGTACCGGTGACCTGC 643312 29 100.0 32 ............................. ATCGCCTGGTCACGCTGGCAGGTGGCCTGCAG 643251 29 96.6 32 ............................A GCGTGCCGCTGACATTGGTACCGGTGACCTGC 643190 29 96.6 32 ............................T GACGGCAATTTCAGCCAGAAATCACCCAGGGC 643129 29 100.0 32 ............................. AAAAAATGGGGTTTGTGTATAACCATCAAATA 643068 29 100.0 32 ............................. CGCTTAGCCATTATCGACTGGCTCAATATCAC 643007 29 100.0 32 ............................. CTTGTGATATTGGCCTTAGTGAATGCTGTACC 642946 29 100.0 32 ............................. CATTGACCTTGTGATTTTTTTGCTGGGTAACG 642885 29 93.1 32 ................G........C... AAAAAATGGCGTTTGTGTATAACCATCAAATC 642824 29 100.0 32 ............................. CATTGACCTTGTGATTTTTTTGCTGGGTAACG 642763 29 100.0 32 ............................. ATTGCGGCGTGATACCTGGGCAGAATATCCCG 642702 29 100.0 32 ............................. CGGGCAGTCAGGAAAACATGGACATTGCAAAG 642641 29 100.0 32 ............................. CTTACATCCCTCAAACTGCTTAGTGAGATCGT 642580 29 100.0 32 ............................. CGATGGATCAAATGTCCTCGGCAGCATTCCCA 642519 29 100.0 32 ............................. CAGCAAGAGATTGCTGGTACCGCACGTGAATA 642458 29 100.0 33 ............................. TGATGAGCAATTCAGAGCAAATGGCCGTCTGGG 642396 29 100.0 32 ............................. CAAAACAACGCATCGAATTTTGTGATGGGGTA 642335 29 100.0 32 ............................. GTAACAGGTAGCAAAGGGACAATCGGAACGGA 642274 29 100.0 32 ............................. AAACAAGATGATGGATTTTTTTTAGAATAGTT 642213 29 100.0 32 ............................. CCTACGAAGTGGTTAGGCACTCGTCCGGTGTA 642152 29 100.0 32 ............................. ATGGCAGGCGCGTTGAAAACCCTGAAAGGTAA 642091 29 100.0 32 ............................. GCGAAGAAAAAGAAACGGTAAAAGGGTTGATT 642030 29 100.0 32 ............................. TTCGGGCTCTAGCGGTTCTACGTCGTCAAGCA 641969 29 100.0 32 ............................. CAGATATTCTGAGCCGGTCATTTCCGCCAGGG 641908 29 100.0 32 ............................. GATGTTAATCATGCGGGAGAATTGCGCCGGTT 641847 29 100.0 32 ............................. ATCAATCCATTGCGCCTGGCCTTCACTAATGA 641786 29 100.0 32 ............................. ATATATTGATCTACTGTATTAGTCAGCTTACC 641725 29 100.0 32 ............................. ATATTAGAGGGTATGACAGGCACTGCGCAGGA 641664 29 96.6 0 ..............T.............. | ========== ====== ====== ====== ============================= ================================= ================== 74 29 99.7 32 GCGTTCCCCATGCCCATGGGGATGAACCG # Left flank : ATATCGAAACTATCCTTTCCGCCGGTCAGCTGACGCCACCAGAACCAGCCGAGGAATCCCTTCCGCCTGTAATTCCTAATCCAGAAAGTATTGGAGATGTTGGTCATCGTTCTTGAAAATGCGCCGCCACGCTTGCGTGGCAGGCTTGCTATTTGGTTGTTAGAAATTCGTGCCGGTGTCTATGTTGGCAATTATTCCCGGCGTCTTCGCGAACACATCTGGAATCAGGTCGCAGAAGGAATCGAAGAAGGTAATGCGGTGATGGCGTGGCGTACTAACAATGAAGCTGGATTCGATTTTGTCACAATCGGTAGAAACAGACGAATTCCTGTCGAAATGGATGGTGCGAAACTCGTTTCATTTTTACCTGAACTAAGTGACGTAAATCGTCAAAATTAAGTAAGTCAGCGATCTTTAAAAATTCAAAAAAAAACGCAGAAAAATTCGGTAGAATTGCGGGGCCCTTTTTTATCCTTAATAATCAATCGATTATGTTTGGT # Right flank : ACGCACTGAACTAATCGAGGGGCATCATGGGTGTGTTCCCCATGCTTTTGCTCACCGGCACGTGTAGTACTGACGTCTGTCGTGCCGCGGTCAAACAGGCGCACACCAAATTCGTTTTCCGCCGCCTGTATGCTGCGACTCAATGCCGATTGCGATAAATGGACGCGCTGCGCAGCACGGATGAAGTTGCGTTCATCGGCCAGTGCAATCAGGTGTCGCAGTCGTTTTAATTCCATGAGTCCCATCCATAAGGCTATGCATTGAATGCATTGATCTTATCTTAAATTTGCATTGGACTGCATAAGGAACTCGCCCCTACACTAGCCAGCATTGCAGCATAGTTTCATCGCTTTACTTCTGGTTTTTGTTTTTGTTTTTGTTTTTCTGTCAGTACCAAAAACTATTTTTACCCGGTTATCTGATCCCCCTCAGTCATGTCGTCATCAACCCAATTGTTCTTTTCCTTTAGGAGATACCATGCGTCAGCTTGCTTCCTTTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCATGCCCATGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //