Array 1 3161656-3158152 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037898.1 Shewanella decolorationis strain sesselensis chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3161655 28 100.0 32 ............................ ACAGGCCGCAATCAGCCTATGTATAAAATGAC 3161595 28 100.0 32 ............................ TGCATGTCGGCCATTGCGTCAGCAATGTGCGA 3161535 28 100.0 32 ............................ ACAAGGCTTTAAGCTGTTTTGCTAATGTTTTC 3161475 28 100.0 32 ............................ AGTATTACGCCGTGCTGCGCAAGGCATTTAAG 3161415 28 100.0 32 ............................ TCGATTTTCTTATGCCGCATCGCATGGATATC 3161355 28 100.0 32 ............................ TTAATTTTGGTTAAACCATACGTAAAGCCCAC 3161295 28 100.0 32 ............................ CAACAGGAATAGACATTGACCGCGGCATGAGT 3161235 28 100.0 32 ............................ TTTGGCTTGCCGTTCTTGCTCTAGCTCATTTG 3161175 28 100.0 32 ............................ AGGCGGAGATTGATTGGCCGTGGCGTTATCTA 3161115 28 100.0 32 ............................ GTTATATTGCCGATAATCCCCACGATAGCGTA 3161055 28 100.0 32 ............................ TAAACATCTAACTGATCCAATCCGATCTTTGA 3160995 28 100.0 32 ............................ TCGTTAATCATTTCAGTGACAGAATCCATTTT 3160935 28 100.0 32 ............................ AAAAGGTGAAGTTGGTGATGTTTTTCTATACC 3160875 28 100.0 32 ............................ TTCGTCATCTGCGTGATGCCGGTGATACCGTC 3160815 28 100.0 32 ............................ TCGAATCAGTTCACCCCTTGCATTTTTCAGGT 3160755 28 100.0 32 ............................ TTCTTTTTCTTCTAATTTGCTGACTTCCATGT 3160695 28 100.0 32 ............................ AGTCTAGTGTTAAAGACCTTAAGCGAATGGAG 3160635 28 100.0 32 ............................ TGAAAAGGAGGCTGATATGATTGATGATGCTT 3160575 28 100.0 32 ............................ AGTTAGGCATTTAAGCGAAAGCAGTGTGATTG 3160515 28 100.0 32 ............................ TGAGAAATAAGGCCAATGCTGCGATAACTTGC 3160455 28 100.0 32 ............................ TTGGCTGGCGAGCGTCATGAGTTTTTCGCGGT 3160395 28 100.0 32 ............................ TCATAATGACCGTAAGCCTTGTTTAACTTACG 3160335 28 100.0 32 ............................ ACCACCGCTACCACCGTATGAAACCTCAATAC 3160275 28 100.0 32 ............................ TTAAATTTTCAATTGGTGAAACCCAATATGAT 3160215 28 100.0 32 ............................ TTCACGTTCGATGAGTTCTTCAATCAAGTGGT 3160155 28 100.0 32 ............................ TTGGCGTAAGTAGAACCAGCGTTTCCACTGTT 3160095 28 100.0 32 ............................ TTCTAATTTAAAGGTTCTGAGCAATGCAGAAT 3160035 28 100.0 32 ............................ TTCGTCATCTGCGTGATGCCGGTGATACCGTC 3159975 28 100.0 32 ............................ TCGAATCAGTTCACCCCTTGCATTTTTCAGGT 3159915 28 100.0 32 ............................ TTCTTTTTCTTCTAATTTGCTGACTTCCATGT 3159855 28 100.0 32 ............................ AGTCTAGTGTTAAAGACCTTAAGCGAATGGAG 3159795 28 100.0 32 ............................ GTTTCAGGGTGATTTAAAGCCGCTTTTCGCAT 3159735 28 100.0 32 ............................ AGATAGCTTGCATTCACACCATGATGCTGCAG 3159675 28 100.0 32 ............................ CCTCGCTGGCTTGGTGATAGTTACTCGCTGAG 3159615 28 100.0 32 ............................ AGTTACTCACCAATGTCGTGATGAAATTTTTA 3159555 28 100.0 32 ............................ TTGGGGTTTACGTTCCTGCCAACGAGCTCGCA 3159495 28 100.0 32 ............................ AATCAGATGAACAGGCAATCAATCGCATTGAG 3159435 28 100.0 32 ............................ GTATTTTGTACCATCCTGAAACACTGCGCACA 3159375 28 100.0 32 ............................ ACTAACCGCGTATTCACTTCCTGCACTGCTTG 3159315 28 100.0 32 ............................ TGACGGTGGTGCGCCTGTTGTTTTTGGGTCGT 3159255 28 100.0 32 ............................ ACTATCGGAGCGACCATCGCAGGATGGACATT 3159195 28 100.0 32 ............................ TGAACTAAGGGGTTCTATCGCCAATAATATCG 3159135 28 100.0 28 ............................ TCAACACCATTCACGGCGGCAAAGCCAA 3159079 28 82.1 32 ...TGT.A.T.................. TATCGTTTACGTCATCGAATCCACCTGCAACA C [3159072] 3159018 28 100.0 32 ............................ TGTACTCTCTACGCTAACCCCACTTCCTTTGA 3158958 28 100.0 32 ............................ CTTCACAGATTGTCACTGTGATAAAGTCAGGT 3158898 28 100.0 32 ............................ TTTAATGTGCTCGGCTATATCGAGCTGAAAGC 3158838 28 96.4 31 ..........C................. TCATACACACCTAAACGCGAGTATGCTCATC 3158779 28 96.4 32 ..................T......... TTATGCTGGTTCTATGTTTGCTAATGGAGTCT 3158719 28 100.0 32 ............................ ATTGATGATGTTGTTGTTCCTGAGACTCCAAG 3158659 28 100.0 32 ............................ ATAATAGTGAGTATGGAAAGGCGTTGAATAGC 3158599 28 100.0 32 ............................ ACACAGAGTCTTAAATTCTTCGTAATTTTGTG 3158539 28 100.0 32 ............................ GCTCTATTGATTCTAACTTTGATTTATTTCAA 3158479 28 100.0 32 ............................ ACATTTAAACCATGTCACATACACATCCTTCA 3158419 28 100.0 32 ............................ TTAATTCGCACTTTGGGATAGCGCAGCTGCTC 3158359 28 100.0 32 ............................ TCTGGTATCGATACTCGCAACCTTTCCAAGCA 3158299 28 100.0 32 ............................ GTTACCCTGTGAAAGTTCAGATTTCATTAGAG 3158239 28 96.4 32 ..........T................. TGATAACGCTACGCCTGCTCTTGTGCGCAAAG 3158179 28 96.4 0 ..........T................. | ========== ====== ====== ====== ============================ ================================ ================== 59 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAGCGTACTTCATGATTTGCAAGGATTGAACTGGTTAGGCCCTTTGGCAGGGTATTGTCAGGTTGCTACGGTTTCTGCCGTGCCAGACCAAGTGCAATATCGCATCATTTCAGTTAAACGCAGTAATTTAAGCAAAGCAAAGTTAACGCGTTTAATTGCCAGAGGTAGCATAGATAAAGACGGTGAGAAACGTTACAAGGTAAAAATGCTTAGCCAAGGGTTTGATAATCCATACCTTGATCTGTGTAGCAGTTCAACAGGGCAGGTGTACCGAAAATTCTTTGAGTTTAGTGATATTCAAGCTGACCCGGTTGGTGGTGAGTTTGATAGCTATGGTCTTAGCAAAACAGCTACAGTACCTTGGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATAGTTGCAACGGGTGGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCTTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : TCAATAACAGCAAAAATTTGATTTGTTCTTCGTTGATGTAGCCTAACAACATTAAGCCTTTTGGGTGAGGGCTTTTTATACGTCTACATATATTGATTCAATGTTTTTTTGATGCAAGTCAGTGTTAGCGGATTGGGCTGATTTAAACAAGGATGGCTGAGATGAAATTAGGTGTACCTTTCGGGCAGGATAAAACCACTGGCGAGTGGAAAGATGTTGCAGAGGTCGAGCGGGGGCTTGCCTGTGGTTGTATTTGCCCTTCTTGTCATTTGCCTTTGTCCGCCCATCAGGGAGATGAGCGAGAATGGCACTTTACTCACCACACCAGAAATACACCTAAAGTAGAAATAGTTGATTGCGAGTTTTCTTTTGAAGTTTCAGTGAGGATGATGATCCATCAATTGCTGCGGGAAGGCGCATCACTCAAGTTACCTGCATATTTTAAGCCTGTTAGTGTACCAAAGGTTTTACGAGAACAATTTCCTCCCGAAGTGATGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //