Array 1 1912139-1916500 **** Predicted by CRISPRDetect 2.4 *** >NC_014218.1 Arcanobacterium haemolyticum DSM 20595, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1912139 29 100.0 32 ............................. GATAGCCGTTCAAGCCAGCCTTGACGTAATCG 1912200 29 100.0 32 ............................. TGCCAGATAAGATGTGTTCCACGGTAAATACT 1912261 29 100.0 32 ............................. CTTGGCGAAGTCTCGGGATTCAATAAGCTGCG 1912322 29 100.0 32 ............................. AGGTTGTCTCGTTATTTCAAGCGGTAACTTGC 1912383 29 96.6 32 ............................A GTGTTAGGCGTGCAGCGGGATAGGCTGCGCCG 1912444 29 100.0 32 ............................. GTCGGTCTGTCTGCTAACTCTTACAATGAGTT 1912505 29 100.0 32 ............................. AAGCCTGCCAAAACTCTATTTAACCGATATCC 1912566 29 100.0 32 ............................. TGTTGATGGTAGGCGCGTAGGGTCCAAATCGT 1912627 29 100.0 32 ............................. AAGCAAATACGTGGAAGAAACAAGCAAACGCG 1912688 29 100.0 32 ............................. CTCAAGAGCAAGAAGGTTCGAGTAATTGATGG 1912749 29 100.0 32 ............................. CAGCAAGCTTTTCAGAAACTAATCGAAAGAGG 1912810 29 100.0 32 ............................. GCGCCGGATCGCGCAGTGAAGAGAAGATAAGT 1912871 29 100.0 32 ............................. GCTTCAGAGACACTGTAACTATCAGATACACG 1912932 29 100.0 32 ............................. GATTGCACTACTCATCGGGGCCGCGGCGCTCG 1912993 29 100.0 32 ............................. ACGCAGCTAGTTATTAAGACGCTCGACGACGT 1913054 29 100.0 32 ............................. GCTTGAATGCTCGGGCTTCTGGTTTGCGTGAT 1913115 29 100.0 32 ............................. GTCTCGAAGCGCGGCGCGTCATTCACTAAGAA 1913176 29 100.0 32 ............................. CGCAGTATGCACACCACCGCCAGTTCCGCGGA 1913237 29 100.0 32 ............................. CAGTAGTGTAGAGTGTTCGCGGCTCCAAGTTA 1913298 29 100.0 32 ............................. GTTGTTTCTGAAGCGGGTCTATACCAGGTCAT 1913359 29 100.0 33 ............................. CCTGAGGTTGCCCGGCACACACCCAGACGGATT 1913421 29 100.0 32 ............................. TGTTCACACGCTTAGGCGCGCCAGGCGGAATT 1913482 29 100.0 32 ............................. ATTGCTTCAAATTCGGCGGTAGTGTACGTGTA 1913543 29 100.0 32 ............................. CACGATTATTGGTGGCGGGCTACCCAAACCAC 1913604 29 100.0 32 ............................. ACCGTTTGGAAGCGGTTCGTAAAAAAGAGCAG 1913665 29 100.0 32 ............................. GTGGAATGAGCAGTTGTTTCGTCCGTATGGAT 1913726 29 100.0 32 ............................. TATGTGGGTAATGTGCATGTGGTCGTCGTCGG 1913787 29 100.0 32 ............................. AGGTTTTCGTCGTCAGGTAGATCAGGGACTGC 1913848 29 100.0 33 ............................. GGGTAGCTCCAGCCTTGGAAATTGGTTAAACCG 1913910 29 100.0 32 ............................. GTGTACCAATGGAATCCAATCAAGATTCGCCA 1913971 29 100.0 32 ............................. TGGAGTTGGTTGGTAGGTAGGTCATGATTTGG 1914032 29 96.6 32 ............................A CTGAGTTGATGACGCAGATCGGTTCCTTAGAG 1914093 29 100.0 32 ............................. TTCGCCGGAACCACCAACACCGAATCAAGCAG 1914154 29 100.0 32 ............................. GGCTACCGAATCAGCAAATAACACTTTCGGCG 1914215 29 96.6 32 ............................T ATTTCTATTTCGAATCTAGTAGGGGATTGCTT 1914276 29 100.0 32 ............................. AGCGCATAATCAGCGCATACTGTGCGGGCGTG 1914337 29 96.6 32 ............................T AGGTTCATCATTATTACCACGTTCCATATCCC 1914398 29 100.0 32 ............................. CAGCGTGCGAGGAGGAGCGTGCGGACCGGTTG 1914459 29 100.0 32 ............................. CCGCGCTGTACCATCGTCGACTACTTCGGTAC 1914520 29 100.0 32 ............................. CTCTACCATTGGTGGTGTCACCCACCATAATT 1914581 29 100.0 32 ............................. TCTCGCACGTTTGAATAATTAGCGTTATCTAA 1914642 29 100.0 32 ............................. ATTAGTCAATGTGAACAGCTCAGTTAGTCAAA 1914703 29 100.0 32 ............................. GAAGCATGGGCATTCTCAGAAGTCCAAGGAAA 1914764 29 100.0 32 ............................. TTTTCCTCGCTCTCGTCGGAGCGCTTGTCGCT 1914825 29 100.0 32 ............................. TGCTGGTTCAGCGCCTAGGATTCCGCTTGCCA 1914886 29 100.0 32 ............................. GGGATATGATGTCTACTGCTTCAAAGCGCACA 1914947 29 100.0 32 ............................. TTCTGACCTACTGGCAGTTCAACAATTGCTCG 1915008 29 100.0 32 ............................. GCCGATGATAGCTTTAATCCAATCATTAACCG 1915069 29 100.0 32 ............................. GATAACTGGCTCTGCTAAAAGCAATGTTATCG 1915130 29 100.0 32 ............................. AGCAACGATTGCTAGCCCGATAGTGCTTTGCG 1915191 29 100.0 32 ............................. GGTTCGCCCGGTAAGCAAGGCCCGACTGGTCC 1915252 29 100.0 32 ............................. AGGTGCGCCTTTACCTTGGAACACCACACGCA 1915313 29 100.0 32 ............................. TATCGGAACACTCGCCACACCGGTCATGGTGA 1915374 29 100.0 32 ............................. ACGAGTCGATTAAGACCACCGTGGATACGTAC 1915435 29 100.0 32 ............................. TCCCATTTACGCAAAGTCTTTTCACCTACGCC 1915496 29 96.6 32 ............................T GGACAATCCAGGAAAAAAAGACGTATCATTCG 1915557 29 100.0 32 ............................. CCGCATCGATTATGCCAGGCGCCTCGATGCTC 1915618 29 100.0 32 ............................. ATTTCGCACATGTCAGCGATGAGATGGAGCCG 1915679 29 100.0 32 ............................. AGCTGTCCACGTCCCGCACAGATAGATCGGCA 1915740 29 100.0 32 ............................. AGCTGTCCACGTCCCGCACAGATAGATCGGCA 1915801 29 100.0 32 ............................. GCTTCATTCTTCATTACCTGGCTTAAAGGAAC 1915862 29 100.0 32 ............................. GGTAGTGGCTCTTTTTTTGCATTGCAGCCCCA 1915923 29 100.0 32 ............................. GAGTTTGTTAGACCGTCCTCAGACACATATCC 1915984 29 100.0 32 ............................. TTTCTCATCCACAGTGTCAATAAAATAAGGGA 1916045 29 100.0 32 ............................. GTACACGCGACGAAAACGTTCTTACCCTTCGA 1916106 29 100.0 32 ............................. GGTTTCGCGCCAGTCATTTTTGAAGCCTTGAT 1916167 29 100.0 32 ............................. GACGCTTTTACTGAAGTAGAGCAAAAAGCGAA 1916228 29 100.0 32 ............................. AGATTTCGTTTCACGCGAACCTCAATATCCGA 1916289 29 100.0 32 ............................. ATCGCAAAGAATGTCGCGGAACTTGGTGTCCG 1916350 29 100.0 32 ............................. CGCTTAGTTGTTCTTTCTCTCGAAACTCACAG 1916411 29 100.0 32 ............................. CATAGGCCAGACTCACCGCACTCTTTCCGATT 1916472 29 96.6 0 ..A.......................... | ========== ====== ====== ====== ============================= ================================= ================== 72 29 99.7 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TTCGACGCGACATCCGAACTTTCATTCATAAAAAGCACATCATGCAAGACATGCTTGCTACTTTGATGGACATTTTAGAACCACACCTTCCTTCACGAAACGATGACCGATTAATCGACGATTTTGGCGAAGTTTCTGGGCACACGCAGTACGGAAAGGAAGATGATGTTTGCAGTAGTAACTTTGACTGCGGCTCCTGATCATTTACACGGGTATTTGAACAGATTCCTCACAGAAGTAGATAGTGGTATTTATGTAGGAAATATTTCTCGAGCCGTTTGTGAAAAATTGTGGGAAAGAATCGGAGAAGTTCCTTTTAACGGAAATGCAAATATAATTTATAGCGACAACACGAGAGAACAGGGGTTTTCAGTGAAAACTAAAGGACGCACCGCGTGCGACATTGTTGATCTAGATGGAGCTATCCTTATCTCCAATCGTGTTGCGCGCGGTGAACAAAAACTCCGTTACAACCGCTGAAAAAGCGCAGGTCAGTTAGT # Right flank : CATTAATGACGCTATTGCGTTAAGCGTTTACGGCCGAAACAACATTGTGCGATTCGTACAACGAAATATCGAAGAGAACACTGTTCGATACATAAATCCAGAAATATTAAAAAGACTCATACCGATACCCGAGCTACAATTGCTCGGCTCGAATATGAGCCTTGATCAAGGTATATCGCAACTACGCACTGTTATTCAACCTCAAACTAGGGATGATCTTGCATCACGAATCTCTGAACGTAGCTCGAATCACTCCACACCCTTCCAAGTATCTCCATCCATATCTCCAGAAAGACCAAAACTATGAACAGAATAATGATCTGCGCACCTATCAACGGAGCCATAACACAAACCCCTGACGGCTCACGCTTTAGCGTACATGTAGAAGATTTGCGCGTAATAGTCGAAGCCCGCGGCGAAATCGGATCATTCTTGACCAAGAACACCGATATTTTCCCCGACGGACAAGACGTATTCATATCCGGAACCCTTAATGAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //