Array 1 258-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVXC01000105.1 Pseudomonas aeruginosa strain P56_London_12_VIM_2_07_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================= ================== 257 28 100.0 29 ............................ GTGCGGGCCGCAACACTCTGCCAAGGATC 200 28 96.4 29 .......................A.... ATTCGGCCCGAATCACTTCGCCAGGTCCT 143 28 100.0 29 ............................ GTGCGGGCCGCACCACTCTGCCAGGACCA 86 28 85.7 29 AG..A....A.................. TTTCGGCCCGCAACACTCTGCCAAGGATC 29 28 92.9 0 ........T.......A........... | ========== ====== ====== ====== ============================ ============================= ================== 5 28 95.0 29 GACCTCGGCGCCGGCGGCGAGCTGGGTG # Left flank : ACTCTGCCAAGGAA # Right flank : GT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACCTCGGCGCCGGCGGCGAGCTGGGTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //