Array 1 168-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTX01000014.1 Ligilactobacillus salivarius strain FZJTZ13M4 Scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 167 36 100.0 30 .................................... TAAAAGTATGTGGAGCAACTACAATTGCCA 101 36 100.0 30 .................................... AACATCATTAACTAATATGGTCTATTGTAT 35 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 99.1 30 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : C # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 26-854 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTX01000039.1 Ligilactobacillus salivarius strain FZJTZ13M4 Scaffold39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 .................................... GCAAGGTCAATTTGTAACGGATGCTAACTT 92 36 100.0 30 .................................... ACATGAGCATGCTACTTACTTAGTTAGTCA 158 36 100.0 30 .................................... ATTTGTTTTTGTTGATAAATTTTGTACATA 224 36 100.0 30 .................................... TCGAGCAATTAAATCTAAACATAAGACTAA 290 36 100.0 30 .................................... AGACCTGATGAAGAAAATAAGTCAATAGTA 356 36 100.0 30 .................................... CATATCCTTGATGTACTCTTGTGGCATAAC 422 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 488 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 554 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 620 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 686 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 752 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 818 36 86.1 0 ..........T.........T...A......G.T.. | C [851] ========== ====== ====== ====== ==================================== ============================== ================== 13 36 98.9 30 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : TGACAAACCAAAGCACACTATATTGG # Right flank : ATCTGCGTTCAGTTGGTGTCTCAATGTAAGTACTTTATAATGAGCTGAATATGAAAAAATTTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //