Array 1 129238-129489 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBSO01000004.1 Bifidobacterium apri strain DSM 100238 Contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =========================================== ================== 129238 31 100.0 42 ............................... GGAAGCGGGAATCCGCTGTTTTTATGGCACGTGTACCCGGTT 129311 30 83.9 43 ..................C.AC...-...C. GATGCTCGGAATCAGCAGGCTGGAAGGTGTGGATTACGCGGTT 129384 31 100.0 43 ............................... GATTGTGGTGTGCGTGGTGTTTTGGCGTGTTTGGGCTGGGTTG 129458 31 87.1 0 ..................C.T.....AC... | C [129482] ========== ====== ====== ====== =============================== =========================================== ================== 4 31 92.8 43 TGTGAGGATTGGCTCACAAAGTGGGTGGTTG # Left flank : AAACTGGCGGGTTGTGTATGCCCGGCCGTACATGACGGGCGTGAACCCGTGGTGAATGGCGGCATCCGTGTGGTATCTGACGGGTTGTGTATGTCCGGTAATGCGTGATCGGTGGGAATGCTTGGTGGACAGCTGTATGCAGGCGATATCTGGGTAGTTGAGTATGCCCGGCCATGCGTGACCAGCGGGAATGCTTGGTGGGCAGCCGTGTGAGGGTGTCATCTGGCTGGTTGTGTATGTCCCGGCATGCTCGGTTGGGTGGTAAGTTCCCGGAGTCCGTTGGATTGTGTGTCAACTGGGTCGTTGTGTATGTCTGATCATGCGTAATGGGCGAGAGCCTGTGACGGGCGGTGGTATCCGGGTGGTATCTGACAGGGTTGTGTATGTCCCGCCATGCGTGATCGGGGAGAACCTGTGGTTGGTGCGGTATGTGGGTGTCATCTGTTGTGTTGTGTATGCCCAGACATGCGTGATTGGCAAGAATGCTTGGTGGGCAGTCC # Right flank : GCACCCATCCCCCTGCTCCCCACCCTCCCCGCCGATGACACGCGGACGCGCGCAGGAGGCCGGAGGCATCGCATCGGCAATCGGCTTCGCGTCGCACGGTTTCCACCACGGCAAACACTTGGCCACCGATACTCAACGCCCCCTATACTCATGGGTATGGCAGAAGGAAATCCATGGGACAATGCCCGCAGCGACCGGTCGGGCCGGTCCTCCGGTTATGTGCAGGGGGAGACGGGCGCCCCGGTTCGTGACGCGGTGTTCGACCGTGTGCCCCCGCATGACGATGACGCGGAGATGGCTGTCCTCGGCGGCATGCTTATGAGCAAGGACGCTATCGGCGAAGTCTCGCAGATGATCAGTGTGTCCGATTTTTACCAGCCGAAGCACCAAACGATCTATCAGGCAATTATCGACTTGTTCTCAGCCTCGCAGCCGGTTGATGCCGTGCTGGTCGCAAACGAACTCATGAAAAACGGCGACCTTGAGAAAGTCGGCGGCGC # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTGAGGATTGGCTCACAAAGTGGGTGGTTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //