Array 1 72909-79103 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOFO01000001.1 Ectothiorhodospira magna strain B7-7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 72909 29 100.0 32 ............................. AGTTTCACTGAATGTTCTTTTTTTGGCAACCA 72970 29 100.0 33 ............................. CAGAACAAGACGGACTCCATCGGCCCCCTGCTG 73032 29 100.0 32 ............................. GCCACTGGGCGTGGGGTGATCTGGTGTTTGAT 73093 29 100.0 32 ............................. CGTCACTGTCCAAACACTATATTTAGCCTCTG 73154 29 100.0 32 ............................. ATGGTTTCCAGGCGGCCCACGGGCAGGGCCAG 73215 29 100.0 32 ............................. CAACCATGAAGCAGCTCACCCAGGACGGCCCG 73276 29 100.0 32 ............................. TTGTCGATGTCGTGACGGCGGTGACTGGGCGG 73337 29 100.0 32 ............................. GCGCTCTCCAGGGCGGCACGGGCGTAGCGGTC 73398 29 100.0 32 ............................. TCCACCAGGGGCAACACCAGGCGTTCCCCGGA 73459 29 100.0 32 ............................. AACCCTTGCCCGCTTCGCTGCGGCGCCGTAAG 73520 29 100.0 32 ............................. GCTTGCGCCTTAGCCTCCAACTCCCTCACGCG 73581 29 100.0 32 ............................. TTTGGGCACTTGGACGATGGCGCCAAGGACAA 73642 29 100.0 32 ............................. TTCCGGGCCATGGTGGACCACACACTGGAACC 73703 29 100.0 32 ............................. TGCGGCCCAGCGAAGCGGCTGCCTGGCGGATG 73764 29 100.0 32 ............................. GTATGGCGAAACCGACGGGGGATGCAGGCTAA 73825 29 100.0 32 ............................. GGATGATCCCCGAACCCGTTACCGCCGCCATT 73886 29 100.0 32 ............................. GCGATCACGTCCAGCTCGATGGGCGTCCCGCT 73947 29 100.0 32 ............................. GGCGAGAGGCCGTACCCCTCGCGCCATTCGTG 74008 29 100.0 32 ............................. CCGGGGAAATGGTGGGTGGTACCTATCGTGGC 74069 29 100.0 32 ............................. CCTCTCTCTCTCTTCTTGCCCAGCATTGCCCA 74130 29 100.0 32 ............................. GCTTTTCCGTGGGATTGGGTCGTGTGTGATGA 74191 29 100.0 33 ............................. CTCAGTACAACAGCATGGAACGCGAGATGGTGG 74253 29 100.0 33 ............................. CCGGGTTCAGCCAATAAATTAGGCTCTCCAGCC 74315 29 100.0 32 ............................. CCCGCCATACCTGCTCGGGGCTTGTACTCCAT 74376 29 100.0 32 ............................. TTCACCAAGGCGTCCACTGTGCCCTGCGGGTT 74437 29 100.0 32 ............................. GTCACGCTTACCATCGCCCGAGCCTACTCGCA 74498 29 100.0 32 ............................. CTTCGGCAAATTGGGCAGCAAATACAGCGCGT 74559 29 100.0 32 ............................. CTCTTTTAAACCTGCTGTTCCAGCCAGTGCCA 74620 29 100.0 32 ............................. TCGGTAACGTATCGTTGGCCGATGTACTCACG 74681 29 100.0 32 ............................. TATTATCAAGTCCTACACCGGGAAAACCACCA 74742 29 100.0 32 ............................. AGGGCAGCAGTGTGACCCCTGAAAAATCCAGC 74803 29 100.0 32 ............................. CAGATCGCCTCGTTGTCCGCCAGGCGGTCCAT 74864 29 100.0 32 ............................. CTCCTGCCAGACCTCTAGCGGCACGCGATCCT 74925 29 100.0 32 ............................. AGCATAACGCTGGGTTATGAAAATCAGATCAT 74986 29 100.0 32 ............................. TGATAATGCCGGAAATTGCGATGGCGGCATCT 75047 29 100.0 32 ............................. CCGGGATTCCTGGGCCGGGGGCTGCTGGGCCG 75108 29 100.0 32 ............................. CGCCTGGATGCGCGAGGCGGCGTGATGCCGTA 75169 29 100.0 32 ............................. CGCTGAACGGGTTCATTCTCGGACTCCTTATA 75230 29 100.0 32 ............................. GGGACCGTGATGCGAGACGATAAAGGACGATG 75291 29 100.0 32 ............................. ATCATCGCCTTCCTGTATCAGAAGTGGAGTGC 75352 29 100.0 32 ............................. TTTGAACCTGGAGCGACCGGACCTGACGATAA 75413 29 100.0 32 ............................. TTGATTACGCGCAGCAGGCGGTATCCAGGCTG 75474 29 100.0 32 ............................. GCAGCAGCGACAGCAGACCGGGGACAGCGTGA 75535 29 96.6 31 ............................C CGCGAATCATCCAGATGCGCGAACTCGGGCC 75595 29 100.0 32 ............................. AGCTCACCCACGGTCACCACGTCCGGTGTCTC 75656 29 100.0 32 ............................. TGGCTGCTCTGTCAGCCATTTCCGTCCCGGCC 75717 29 100.0 32 ............................. CAGTGCCTCCAGTGTGGCCACGTCCGGGTGTA 75778 29 100.0 32 ............................. CGCCCGATGATGTCCGATCTGCGGGACTCTGG 75839 29 100.0 32 ............................. CGGTTGTACTCACCAAGGAACGCGAGCCGCAC 75900 29 100.0 33 ............................. CGGTTTTGATCGAGGGGAACTGGCTGATCCGAT 75962 29 100.0 32 ............................. CGTCTGCGCTCCGGCAAGGTGTGGGACAAGTT 76023 29 100.0 32 ............................. GATCTGGCGGATATTCTTGGGAAGATCCGGGT 76084 29 100.0 32 ............................. GATGTCGTGTGCGGGTAATGATGTACCTGCGC 76145 29 100.0 32 ............................. ACCTGGCCGGAGTTTTGTCAGTGGCTTGAGTC 76206 29 100.0 32 ............................. CGTCCCCCTCGCCGTCCGAGTGCCAGTGGAAA 76267 29 96.6 33 ............................T GACACCTACCCGGATCGTGATCACCTCGCCCGA 76329 29 100.0 32 ............................. CCGACGCATTCATCCGTGAACTCGAACGCGCC 76390 29 100.0 32 ............................. CTCCATCTGCATCATCGCCTGCTGCGCAGCCC 76451 29 100.0 32 ............................. TGACCCTGAGCAGCGTGGAAACTATAATAAGG 76512 29 100.0 32 ............................. TGGCCCGCCGATTGGCCGAGGTGGAATTGATC 76573 29 100.0 32 ............................. GCTGATGAAGTGAAGCTGATTAAGCCGAAGAA 76634 29 100.0 32 ............................. AATTTCTGTGCTTCATCATAAATAACAATAGA 76695 29 100.0 32 ............................. CGATCGACAAGGAGGCCAAACGCCTAAAACTA 76756 29 100.0 32 ............................. GTAATGTCTGGAGTCATCCTTGGAACACGCAA 76817 29 100.0 32 ............................. GGCCGAGTATGTGACATTAAAAATGTATGACA 76878 29 100.0 32 ............................. ACCACATCGTTTTCATTCGTCCACAGCTTCAG 76939 29 100.0 32 ............................. GCATCCAAGAAGCGGCTCAAGCCCGCCGCCTA 77000 29 100.0 32 ............................. GTGATGATGAGGCTGGGCGGCTCGTAGAACGG 77061 29 100.0 32 ............................. GAACTGTGAGTGCTGTCCAAGTTCCATGTGAT 77122 29 100.0 32 ............................. TGGACTTCGGGAAATAATTCCCGAAGTGCAAA 77183 29 100.0 32 ............................. ACCCGCCGCCGCACAGGCAACCACAATCATCA 77244 29 100.0 32 ............................. CCCGGCTGGTGCCGGTCCCGGTGTCGCTCTCC 77305 29 100.0 32 ............................. GGCCGGGCCGCCGCCGTGGCCGCTGGTGCCCT 77366 29 100.0 32 ............................. TTTTGGCGAGGAACTTATAGCTGTCGTTAGAC 77427 29 100.0 32 ............................. ATGGTTTGTTGATGCTCCACGACCCATGGGCC 77488 29 100.0 32 ............................. TCCCTGGGCATGAGTCTAGCCCTTTTGAAAAC 77549 29 100.0 32 ............................. CCTTGTTGCCAACATCCAGCGCGTGGCAGATC 77610 29 100.0 32 ............................. GTTAAAGAGGCCTACGCCAACTACCAGGAAGC 77671 29 96.6 32 ...............A............. ACTGATATGGCAATCCAAGAACAAAACATCGT 77732 29 100.0 32 ............................. GCCGTCCACCGGATCGTCTGGGAAGCCCACCA 77793 29 100.0 32 ............................. GACTCCCGGCCGGCCCGGTTCGAATCGTGCTG 77854 29 100.0 32 ............................. AAGGTGCAGGAGCTGACCGATACGGAAGTCAT 77915 29 100.0 33 ............................. CATCACGAAAAGAAGGGCTGGGATTCGACGCGA 77977 29 100.0 32 ............................. ATCATGCATATCACAATCAGAGACGAACACGG 78038 29 100.0 32 ............................. AACGACCAGATTGTCCGCGCCATTGTTCGTGC 78099 29 100.0 32 ............................. CTCGTGGACGCCCACAACCACGCCATCGATGC 78160 29 100.0 32 ............................. ACCCGCACCTTCGCATTGATGACCGCCGTTTA 78221 29 100.0 32 ............................. TATTCAGGCGTGAAGTGCGCGATGCCTGCTCG 78282 29 100.0 32 ............................. CGACGAGTTCAGCCATGACACCGAAACCCGTT 78343 29 100.0 32 ............................. GCGTCAACGATCAGGCTGGCCCTGCGGACCTG 78404 29 100.0 32 ............................. GATCTTTCCCCAGACGAACTGGATCACCTCAG 78465 29 100.0 32 ............................. AACGTGATCACCCGCCTGCCCACGGACGACGC 78526 29 100.0 32 ............................. TGGGACGAGATCGCCACCGACTTCATGCGCGA 78587 29 100.0 32 ............................. CCGGTCGCAGAAGGCTGATAGGGGCGCGGGTT 78648 29 100.0 32 ............................. GGTCAGTTCCACGTCAGTCATGCTTGTGCCTC 78709 29 100.0 32 ............................. CTGGGGGGCTGGATGCTGGATGCCGCCGATGG 78770 29 100.0 32 ............................. CTCATGCCAGCCAGGTCACGGGCCGCCGGGTG 78831 29 100.0 32 ............................. CCGTACAGATCCCGGTCCCGGGCGCTGGTCTG 78892 29 100.0 32 ............................. TGCTGAACATGCGCAACCCGGGTGCCTTTGCT 78953 29 100.0 32 ............................. ACATACCATGTCCCCCTTTTTGTCCGTACAAA 79014 29 100.0 32 ............................. CATGTTATTGTCGCTGGTGAGGCACAGCTCAC 79075 29 96.6 0 ...........................A. | ========== ====== ====== ====== ============================= ================================= ================== 102 29 99.9 32 GCGTTCCCCGCAGGTGCGGGGATGAACCG # Left flank : GGCGCCGGCCATTCCTCTTGCGGAGCCTTTGGGTGATGCTGGTCATCGTGGTTGAAAATGTGCCGCCGCGCTTGCGTGGGCGTCTGGCTATCTGGCTATTGGAGACGCGAGCCGGGGTTTACGTTGGGAAGGTCAGTCGCCGGATTCGTGAGATGATCTGGGAACAGGTGGTAGCCGGTATAGAGGATGGCAATGCAGTGATGGCTTGGTCCACCAATACGGAGGCTGGCTTTGATTTTCAGACTTGCGGCAAAAACAGACGCCTTCCATTGGACCATGACGGGATGAAACTCGTGTCTTTTTTTCCCGATCCAGTGGGGGATGAAGGAGGAAACTGATGCGCATGTGCTGGTACAAATCCTGACTGCTTCTGTTTGGTATATATAACTGTTTGATTTTTAATGCTCTTTAAAAACTTGGGAAGTGTCATGAAAGGAATAAGTGTTGGTAGAGTTTTTTGTGCTTTAAAAATTTAATTTTTTCATGGGGTTAGAGGAAGT # Right flank : GGGAGAAGAGGGACAGGCGCTCTTGACTGTTTAGGTCGGGTATTGGCGGTGGCTTGCATAATGCGCATTATGGGAAGCGTGTTTTCCCCTGTTTTCGCGGCGATCCGAGCCGTCAATCCGGCATTTTCCCCTGATATTGGCCCTGGCAAACAAACCGCAGACAGAGTTCATCCTCGGCATATCACCGCAGCGAGGAACCGCCGTGAGGGAAGGGGTCAGGCTGCTGATCGTCGTCGCCGTGGCCGGTAAAGGGCCTCGAACTGCGTGCTCTGTGCCAGCCATTGATCCGGGGTGAGTCCCAGCCGTTCCAGGATCGGAGGCAGGGTATTGGCGATGGCGCCTTTCTTTCTCGGGTCGATGGCCCGACCTGTATAGTCCACCAGGGCGAGATAATCCTCGAAGCCAAACGGAATGCCGGGCTGTTCCCGTTCGGCGCATGCGCCTTCAAACGGCAGCAGCGGCTTCACCGGTCCGTCGAACCGCATCAGGGCCTCCATCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCAGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCAGGTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //