Array 1 127801-121966 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044499.1 Lapidilactobacillus dextrinicus strain LH506 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 127800 30 100.0 37 .............................. ATGTTTGGATTCGCCAACCCCGAAGTGGTGGTAGCTA 127733 30 100.0 36 .............................. AATCGAGTGGATAATATTGATATTGAACAACTTCAA 127667 30 100.0 35 .............................. CGTACCGGTCTTTGAAATAGCATCAAAGAAATCCT 127602 30 100.0 35 .............................. TTATGACCACCACGGCTACTGAAATTCATTAACTT 127537 30 100.0 37 .............................. GAAATGGCGAAAAGCCAATAAACACATTGTTAAGTTT 127470 30 100.0 36 .............................. GAAGCGAGTCTACGTTAATATTCAGGACGCTAAATG 127404 30 100.0 35 .............................. TGCTGAAGCAAGCGATATGGGTGAAGCCTTAAAAA 127339 30 100.0 37 .............................. ATGATTTGGTCAAGGAATTTGGTATTCGTGTTGCCGA 127272 30 100.0 36 .............................. AACTTGGTTGGTAGATTGCAAGAAACGTGCAATAAA 127206 30 100.0 37 .............................. ATGATTTGGTCAAGGAATTTGGTATTCGTGTTGCCGA 127139 30 100.0 34 .............................. TTGGCGTTGATTACTCAAAGATGACGAGTAGTCT 127075 30 100.0 36 .............................. TTTCTTTTGGCGTTTTATCGATTTGATCCATTAAAT 127009 30 100.0 36 .............................. CAACGAGCGCAACGAGATTATTGAGTTTGCAAGCTT 126943 30 100.0 36 .............................. AGTTACGCTTGGAATTGTTGTTTCCCAGCCTGTCGT 126877 30 100.0 36 .............................. AGTTACATAGCCCAAAACGCGGTCTGAACCATCTTC 126811 30 100.0 36 .............................. TCAACCCAAGATGTCATATCCTAACCAACGTTCAAT 126745 30 100.0 36 .............................. ACCAGCTATTCAGGTTAGAAACGTTAAAAGTCCTGA 126679 30 100.0 36 .............................. TGGGCATGCCTTTCTAACTGATGACGCACCAATCGA 126613 30 100.0 35 .............................. GCTAAATTAGCTACCAGTTTGGCGATTTTACCGTT 126548 30 100.0 36 .............................. GTCTTGCTCATCAGCGATACGTTGCATTTCTTTCTT 126482 30 100.0 35 .............................. GATTGCCAAAAACTATAACCGCTAATTTTATCGCT 126417 30 100.0 35 .............................. TTTACTGATGTAGATTGGTCAGTTGATACTCACCG 126352 30 100.0 36 .............................. AATGTTGTTCCGTACTTACTTCACAATTTAGCTATT 126286 30 100.0 36 .............................. AACATAGAGATTGGCAAGGTGACTCAGATGTTTGAG 126220 30 100.0 35 .............................. GGTTCATAACTGACTGAAAGCGCCCGGTGATTGTT 126155 30 100.0 35 .............................. GATATTGTTAGTCCGCAGAATGCTCAACTTGGTTT 126090 30 100.0 36 .............................. AGTTTCTGTCGCCATGAGTACACTTAATATTGCTAC 126024 30 100.0 35 .............................. GTGGGTAGTGCCTTGGCTAATCTACCAGGGTTGAA 125959 30 100.0 36 .............................. CTAATAACGTCAATGAATACGCAGTTATTGATACCG 125893 30 100.0 37 .............................. GTGGAGTAACCACTGATAGACCTGGTCAAAGTTAATC 125826 30 100.0 35 .............................. ATTTATTTAACTTCAATTAAGATTTTATTATAGAA 125761 30 100.0 36 .............................. TGTTGCGACTTGATAATCACCCATTGCGCGGAACTT 125695 30 100.0 35 .............................. TGCAAAGTCTTCAAAATGGTACATAGCTTGACGCA 125630 30 100.0 35 .............................. GGCATTAGCTTTGATGGCTCGCCAGTATCAACATC 125565 30 100.0 37 .............................. TGTAACCCTTTAACGTAATCGGCTTGTCCGAACCTTC 125498 30 100.0 36 .............................. AATTGCGTGAAATCGCCCGGCGATTTTGTCGCATAT 125432 30 100.0 35 .............................. TCAATCTGATTGGAATGTATCAGATACTACAAGTA 125367 30 100.0 36 .............................. TGACCTGTGGCAATACACTAGCGCCGGTCGTGTTAA 125301 30 100.0 37 .............................. AAGCGTCAGGCGTTGAGATAATGTTTGAGAAACCTTG 125234 30 100.0 36 .............................. TAATAACTTATTCTTTGATTTGGCACAAGAATTGAT 125168 30 100.0 36 .............................. CAAAGCGACAAAAATTCCAACTCAAAAATTTATGAA 125102 30 100.0 36 .............................. AATTGTTCGATACATTGTTCGAAAGACCATTTCATC 125036 30 100.0 36 .............................. TGATTGTTCGGGAATTGCCCAATTCGCGTTGGTGTG 124970 30 100.0 36 .............................. TCCCGCGTTTTTGATTACTTTAATAATCGCGTCGTA 124904 30 100.0 36 .............................. GAAACCATTGTCAATATCAGCTATGTTGTATGTCAG 124838 30 100.0 38 .............................. GGTTATTCAGTCGCGCAAGCTGGTAAGACAGGTCCACA 124770 30 100.0 36 .............................. AAATTTGATTTGCGAAACACATCTAAGTATGAAGTT 124704 30 100.0 37 .............................. ATGTTTGGTAAAGACGTACGCAAATCATTATCTCAAT 124637 30 100.0 38 .............................. GTTACTTGGACATCAAGTGATGCGACGATTGCAACTGT 124569 30 100.0 36 .............................. AAGATCGTGAACAAGGTATTGACGCTTCGGATTATC 124503 30 100.0 36 .............................. GTCTGCTCCAACTTGGTTCGCGATTTGGTCTAAAGA 124437 30 100.0 35 .............................. AATATAAAATATGAGTGTCATTGTGAACGTATTGG 124372 30 100.0 35 .............................. ACAACAAATGGCAAATGATAACATATCATTACGTG 124307 30 100.0 36 .............................. CCAATTCAACGCCCGCTTTTTCAGCATACGAGGTTA 124241 30 100.0 35 .............................. AGTTGTACTAAACCCAACTTTGCCGTCTGAACTAT 124176 30 100.0 36 .............................. ACCATGACGTCTAAGGTTACTACACCGATTGTGGCT 124110 30 100.0 36 .............................. AAGCCTCCATTATTTTGGACGGACAACGCAAAAATA 124044 30 100.0 36 .............................. GCTCAACATTTCCACTACGCTATGTTGAGTATCCAT 123978 30 100.0 36 .............................. GTCACGTTCTTTAATATTATCAAGGATCAGGAAGTA 123912 30 100.0 37 .............................. TGTCGCTTCGTGATTTGCGGGGGTGACATTTTTACTA 123845 30 100.0 37 .............................. TATTCTGAACGCACAAATTCTATTGCAAATTGCGAAA 123778 30 100.0 35 .............................. TATAGACGCGTTGGCAATATTGTGACGCTTCACGT 123713 30 100.0 35 .............................. GGTGCAACTTTCCGTGAACGAATTGATTATCCAGA 123648 30 100.0 36 .............................. CGCAGCTCAATCAAACTATGCATGATCTGGATAACA 123582 30 100.0 38 .............................. GAAAGCATCGAAAAAGGTTGGCTTAATCAACAATTGAT 123514 30 100.0 36 .............................. AACTTAGCCACAGCCCGGAGTAAGAGTACTAAAAAG 123448 30 100.0 38 .............................. ATTCGTTGCGCAAAATGATTTGCGTTTTCTTTTTCATA 123380 30 100.0 36 .............................. TTTTTATGATTTAATACATAAAAATTATTGATATGA 123314 30 100.0 36 .............................. GTTGTAAACCTCGTTAGCGTATAAACGTAATTCGTT 123248 30 100.0 36 .............................. GGAACAATATTTCAATATTGAAATGACGGCTTGGCA 123182 30 100.0 36 .............................. GCAAGGTGTGCCAATCACGACAATTCAGTTTTTATT 123116 30 100.0 36 .............................. CCATTCTTAAAACCACTTGACAACTGACAAATCAAA 123050 30 100.0 35 .............................. GTTGACCCTGACACTTCCACGCCAGCGATTGATGC 122985 30 100.0 36 .............................. GATTTTGCAAATACAAGACGCATACCGCGAAACAGA 122919 30 100.0 36 .............................. CTTGTATTCAGTCTTAAATCGTTCTAACTCATTAGT 122853 30 100.0 37 .............................. TCTTTTGCTCCAAAGGAACGCGTTTTCCACTTTAGAT 122786 30 100.0 36 .............................. TTTATTCGTCGCGCGAAATGATTAGCGTTTTCTTTC 122720 30 100.0 36 .............................. TTTATTCGTCGCGCGAAATGATTAGCGTTTTCTTTC 122654 30 100.0 36 .............................. TTGTCCAGTTAATGTTTTCATACTTACTGATATTGA 122588 30 100.0 35 .............................. TTTCAGCTATACGGTAGTTCTGGAAAACCAACGAT 122523 30 100.0 36 .............................. TTTGTTTGATATAGTTTTGTGTTCATACGATAACGA 122457 30 100.0 36 .............................. CTTGCATCGCTTGAAGAAGCGATTCTTTCATGATGT 122391 30 100.0 36 .............................. CACCCAAAACCAGTCGAGCTAGTATCATTCATATAA 122325 30 100.0 36 .............................. TCGAGGTTGTCGGGTAGTGTCATGGTGTCATTTTTG 122259 30 96.7 36 .......G...................... CTTTTGCCTCATTGTATTTTAGTAAGAGTTGTAAAT 122193 30 100.0 36 .............................. GCGTTTGAGTTTGCGAAGTTTTCGTTGTTTGCACTT 122127 30 100.0 36 .............................. TAGATTTTTCCAGTGACCTGATTTACGTTCAGCCAT 122061 30 100.0 36 .............................. CTATATTAACAAAATTTTTATGGGTGAAGGAAGCTA 121995 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 89 30 100.0 36 ATTTACATTCAATACTCTTTAGATAAAAAC # Left flank : TTCTTTTAACTTTGGATAGTCTAAAACCCCCTGATCAATTGCTATACCCTTTTTCTTTAGATAATACATATAATATTTAAGTTGGAATTCACTAGCTTTTTCGATAGCGCGTGACTGTTTTACCTCGTGCACTATTTTCCAGTTTTGAATAAAGTCAATCGCAACAACACCGTCAATCATTCGTTGATGATGCTCACGCTGATAACTCTCCTGATCCAACACACTTCCAAGTTGAACCCGCTCATTCTCAGCTTCGAATCTCACTTGATGTGTTGATAGCCACAACTTACGCTGACACACAAAATAATAGTTAATATCCCCACCAGTTATTGCCCTCATCAATAAATCACACTCCCACATCGAGAATAACCGTTCACCGATTGATCATAAATTCACTTATAAATTCATTATACTATTCTTGCAATTTATTTAACAATGAATGTTCAAAACTTATTAGATAAAAACACAAATGTTCATTGATTGTTGAACTACCGAAGCTG # Right flank : TCCGAGCCCTACTTTCCTTATAACCACAGACTTCGCACTATCAAATCTGTCGTTCTAACGAAAATAATTAAAAAAACAGAATAAAGATTGTCAGTATCTTAACAATCCCTATTCTATCAGTATTACGTTCATCTGTCGATCTCCTGCCAAAATGACGTTATTACCTATCGACAGTTTTTAAATATTTATTTATCGTCGGTGCCCCAAATTTCTTCTTTTAGGCGCAAAGCTGTTGGGGTGGTGGCCATACCGCCTTCTGCGGTTTCCTTGAAGGCACTTGGCATTTGCTCGCCAACACGGCGAACCGCTTCAATAACTTCATCAGTGGGAATAACCGAAGTCAGCCCAGCCAACGCCATGTCTGCGGAAACCATCGCTTGACTAGCACCCATGGCATTACGTTTAACACAAGGAATTTCTACCAAACCAGCAACCGGATCACATATCAACCCCATTAGGTTTTGCAATGTAATGGCAACAGCATAGCTGGCTTGCTCAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCAATACTCTTTAGATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 136755-137510 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044499.1 Lapidilactobacillus dextrinicus strain LH506 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 136755 30 100.0 37 .............................. AAATTTCCTTAGCTTAATCTTCATCAGTGTTTACTTC 136822 30 100.0 36 .............................. ATGATTAAATCCGGGCAATTAAGGCGTCCAAAGAAC 136888 30 100.0 36 .............................. TCCCGTGACATTGAAGTTAATACGTATTCCAACATG 136954 30 100.0 35 .............................. AAAGTTAATCGATATTGAAACTGACGAAGAAGAAG 137019 30 100.0 37 .............................. CCTTGCCAAACACGATTGCCATATATGCCTTATCAGT 137086 30 100.0 35 .............................. AGACGATATGCAACGCGTCACCGGTGCGAAAAACG 137151 30 100.0 36 .............................. CATGCTTTTTGGCAATCAGTGGTTGCTCAGTTATTG 137217 30 100.0 36 .............................. TTCAGTGTGCTTGTTGTAACATCACTTTTCTGAAAC 137283 30 100.0 36 .............................. ACTAGCATTTGAGCAGTGTCTGCGTCATAAATATTC 137349 30 100.0 36 .............................. TACCTCCTTATTTCTTTAGATAGCTATCTTTAAATC 137415 30 96.7 36 .............................G CTTGAACGGAGAATTGAGCAAATGCAAGATTGGGTT 137481 30 86.7 0 ........C....A..........A....A | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.6 36 GTTTTTATTTAAAGAGTATTGAATGTAAAT # Left flank : ACAATTAGGCAAGCATACGAGATACTGACAACACCGATGCGTGAATTAAGTAAAAATGGTAATGAAAATCCTAGAAATATGAAATCAGCGGCGATTGTCACGATAAAGAATTTTTTAGTGCCAATTTCTAACTATCAGTATAAAAAACTCAAAGATAACAATCGGATTGACCTTGACCGATTAGCAAAAAAGCAAAGCAATTTTCATTATTTGATTGCTGATGTTCCATATGATGATGAAATTGGTTTGCAAATGCCAACAATTAATGTTAATGATTTTGTTAACGAATATTCCAATATTTTTTAGCTAAATTTTGTTTTAAATATCTGTCGATGTTCATTACCGTAAATTTATCAAGAGATCGACAGACATGGAAAACATTGTTATTTTAGGAATTGTTCAGTAAATATTGGACTGAGCAATTCTTTTATAGATAAATTTTAAAGATTGACAGATTCTATGCTGCGGTTCCATCTAGAGTAAGGAGTTTTGGAACCGTG # Right flank : ATGAAATACCCATATGGAGGCGAGGGGACCTGATGCCATTTTTTTAACATCATTGAATCACTAGTCTAGTAAGGTCTAATCGTATTTCTTTTGCGAAATATGTAAGCGTGTTAAACTTTGGTTAGAAGGGGATGTATTTGAAAAATATGGCGCCGTCATCGGATAATAATTATCCCCATCTGTATGAATAATGACCAATAGGAGGGAATCGCTTATGACTAAAGTAGGCAAGGAACTATTAATGCAGTTAAAAGAGGCGACGGGACCTTTTGTAACAATTATGCTTAATACTCCCGCGGATCATCAAGGTGTTGAAAAAGCACAACTTAAATTTAAGAATTTTGCTAAAGAAGCAAAGAAACGTTTTGAAAAAAAATATCCTGATGCTAATTGGGAAAGCTATCAAGCCAAACTAGATGCATTAGCAACAGATCAGTCTTTTTGGCGTAGTGCTTCAACAAGTGTAGCGATCTTTTTAACAGAAAGTGACACATTGGTTC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAAAGAGTATTGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //