Array 1 21686-23727 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTF01000019.1 Streptomyces gelaticus strain JCM 4376 sequence019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 21686 29 100.0 32 ............................. GCGGACGATCTCCGCTTCGGCCCCCGAAGCTG 21747 29 100.0 32 ............................. CGCCGCCGTTGCAGCCGCCGTTCGGCGCGGAT 21808 29 100.0 32 ............................. CTGCCGTCCACCAATCGATAGCGGGGACAGTC 21869 29 100.0 32 ............................. AGGAAGTAGGCACGCACGGTGCGTGCCTTGTT 21930 29 100.0 32 ............................. TGCGCCGCGTGTGCCAAGAACGAGTGCGGCGG 21991 29 100.0 32 ............................. GGGGCGTCCCTCCCGCCTGGCAGCACCGGGGA 22052 29 100.0 32 ............................. CTCCCGCTGCCGACGCGCCTCGTACGCCCGCT 22113 29 100.0 32 ............................. TTTCTTATGGACGTCAACGGTGCCTTTTACGG 22174 29 100.0 32 ............................. ATCAGCTCCTTGACCGGCGCGCACTACGTCGA 22235 29 100.0 32 ............................. CTGATCGAGAACTGGGGACCGGGCTGCGCCTC 22296 29 100.0 32 ............................. TGGAGCGGGTATCGGCGCAGCGTGGACACACT 22357 29 100.0 32 ............................. TCCGCAAGTTCGGCAGAACGCTGGATGCCCTC 22418 29 100.0 32 ............................. GTATCCCTCGGCTGGTCGGTCCCGAACGCTCC 22479 29 100.0 32 ............................. TTCGCGCCGGAGGAGCCCGCCTGAGAAAGATG 22540 29 100.0 32 ............................. TGGTCACCGGACTGGTCACCGGACTGGTCGCC 22601 29 100.0 32 ............................. TGGCCAGTCGGTAGCGGCGCTCCGGTCGGCAT 22662 29 100.0 32 ............................. TCGCCTTCACCCTCAAGGCGCTGAACCCGGTC 22723 29 100.0 32 ............................. AAGTCCTGGGCCGCGCCCCGCGGCTCGTAGCG 22784 29 100.0 32 ............................. ATCGAGGACGGCGAAGACATCACGTTCAAGGC 22845 29 100.0 33 ............................. GGGGTGATGCCCCGGCTGCCGAGGTGGCTGTAG 22907 29 100.0 32 ............................. CTCCCCGGCCGGGGGGTTGCTTTCCTCGCGCG 22968 29 100.0 32 ............................. CTACAACCTCGCAGGTCAGAGGCGGTTGCGGG 23029 29 100.0 32 ............................. GCAGAGCTGACCACCGCAACGGCTCATCTGGT 23090 29 100.0 32 ............................. CGGCACGTCGCCGGCCAGACCCTTCGCGGCCC 23151 29 100.0 32 ............................. TCTGTGACTCCCGGACTCCGGGACTCGCAGAG 23212 29 100.0 32 ............................. ACAAGCATCGTCCCGGGCAAGCCGTCCGGTGG 23273 29 100.0 32 ............................. TACGCCACCGGCCTCATCGACGGCTACCTCCA 23334 29 100.0 32 ............................. GCCTTGACGATGAGGTCGTCCGTGCAGGGCTT 23395 29 100.0 32 ............................. TTCCGCGCCTGCGCGGCGTAGTCCTTGAGCTT 23456 29 100.0 32 ............................. GAGCTGACCCTTGCCGACGTCACAGCGGATCC 23517 29 100.0 32 ............................. GAGCCGTAGCCGCTGACGTGGACGACGTGACC 23578 29 89.7 32 .............GT..A........... TCCGTCTGTTCCTCGCCGGACTGGACGATGCG 23639 29 93.1 32 .............GT.............. GGGTCCCAGCCTCGCTCGATCAGCAGGACGTG 23700 28 82.8 0 ..............T..-A..C......T | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.0 32 GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Left flank : CAGTCTCGACGTAGTTCACATCGAGTCACTGACACAGGCCCTCTACGTCGAGGGCAGAGAAAACGTAGCTGCCTACCAGGACGCCATCGAAACCCTCGGCGCCAGTGCGCTGTCAGCAACCGACTCGGCAGATTTGATCACTGAGATTAGGGACCAGATATGACCACAACTTCTGCACCACGCACCGTTCGTGACTCTTCCACCCTCCCCGCAGCGTGGTGGAAGTCGTCGCAGTCAGCTGCCCAGTCCGACTGCGTGGAGTGCGGGGTCGTCGACGCCGAGAGCATCGCAGTCCGCGACAGCAAGGTTCCGAACGGCCCGGCATTGATCTTCGGTCGCGACGCCCTCTCCGCGATGGTCGACGCGGTAGCCGGCGGCCTTGTGTGATCCGGCCTCGCCCGATCCGGAAGACGGACATGCCAGGGTGCGTCGAAATGTCCGAATCTCAAGAAGTAAGTAAAAACAGGCTCCTGCTCACATAAGCCAGCAGGTCAGCAACT # Right flank : TACGACAGCCAGGCGGTTTCACGGACGAGGAAGTAGTCCCCACGCACACTCGGCCAGCCCTATCAACCAGAACCAGCCCAAGTCCGAGGGCAGCATGTCCACGGTCATCCTCCAGCAGCACACAGAGAAGGAATCGGGCATCCCACACCCCCGCGCAGCCCTCGGTCCTCAACCAATGAATCGATCAACCAGAGGCATAACTCGATCAAAGTCACACACTCTGGATCCATTTCGGAATCCGACACACGAGCGCCACCCACCCATGTCAAATACAGCTATGCACCATGACGACCCCGAAGTCCCCACGGCCTACGCCAAGTTGTCCCCCGCAGCGCGGACAGCCTGGGGCAAGCACGACCGGGCGACCGAGGAGTGGCTCCCCTTGTGGCGGCACATGGCGGACAGTGCCGCTGTCGCCGGGCGACTGTGGGATGCGTGGGTGCCGGAGAGCGTGAAGGCGCTTGTTGCCGAGCCGCTCCCCCGGGGCGCGGCGGACGCCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 262059-260627 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTF01000008.1 Streptomyces gelaticus strain JCM 4376 sequence008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 262058 29 100.0 32 ............................. GACGCCGGGCGCCCAGCCGACACCGCGACGAC 261997 29 100.0 32 ............................. AAAGCCAGTCGGTCGTGATGCATAGGTGTGAG 261936 29 100.0 32 ............................. CGGGGTCGTCGAGCCCGTGATCCCGATTCAGA 261875 29 100.0 32 ............................. TCATCAGCCTCAAGCCCCTGGAAGGGATCAAG 261814 29 100.0 32 ............................. GACGGCGCCCGCCGGACCAACCGGGAGGGCCG 261753 29 100.0 32 ............................. AGGTTCGGGGCCGCGGCGAGGACCGGGGCGGT 261692 29 100.0 32 ............................. TGGGTGCCGCTCATCATCAAGACCCCGTCACA 261631 29 96.6 32 .........T................... TGCTTGGACTCTTCGGGGGTAGGCATCCGAAT 261570 29 100.0 32 ............................. GTCTCGTGCTCCCGCTGAAGATGGCCGTACAG 261509 29 100.0 32 ............................. TGGGCATCCCACACACGGGCCTGCTCGGCCAC 261448 29 100.0 32 ............................. CTGCGCAGCCGCAGGCGTCAACGAGAGCACGG 261387 29 100.0 32 ............................. GGATGACACCCGAGGACCGCACCGCTTGGGTA 261326 29 100.0 32 ............................. TTGATCGCGAGCTCGTCGAAGTCGGACTCGAA 261265 29 100.0 32 ............................. GCGTGGCGGTACTACATACGCGGAGTCGCGTT 261204 29 100.0 32 ............................. GGTGTCGGTGACCTCGTCCACCATGTCGGTAG 261143 29 100.0 32 ............................. TCGCGGTCGCCTCGAAGCTGGGCCAGCAGGAC 261082 29 100.0 32 ............................. GAGCCCAAGGTGGAAAGTCAGGGCAAGTTCTT 261021 29 100.0 32 ............................. TCCACGCGTAAGCGAAACCGCAGGTCAGAGCG 260960 29 100.0 32 ............................. CGGCCCGGTGTGCACTCCGACGACCTTCCCCA 260899 29 100.0 32 ............................. GTCCAGGCCGGGCACTGTCCAGGACGTGGTGT 260838 29 100.0 32 ............................. TCCGGGGTGGCAGCCGCCCACCGGTAGACCTG 260777 29 100.0 32 ............................. CGGCCCGGTGTGCACTCCGACGACCTTCCCCA 260716 29 100.0 32 ............................. GGGTCGTTGATGCTGATCGGACCGTGCTCGTC 260655 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Left flank : GCTTCGAGGTCCACTCGGACGGCCACAGCCTCCGCCAGCACCGGGCCGAGGTGACGGCCCTGGCCGCGGACTTCGTACGCGGCTCCCTGTTCGGCCACGCATACGCCCGCCCGGTCGCCGACGCACTGGCGGCGCCGCCGCCGCTGGGGCTGCGGATGCCGCTGGCGGCGGGGTTCGGGAAGTCGCTGCGGGGGTGAGGCGGCGGGGTGACGGGCGGCAGCCGGGGCCGTCGTCACCGGCGCCGGTACCGCAGCGAGGCTCCGAGGGCCGGGGCGCGGCCCGTGATCGGTCCGGGCTCCTGATGGCCGATCAGGCACTTGCGCTGCAGGCGGGGTTAGGCCGGAGAAGGAAGTGGAGAGTTGAAGACAATCGGAGATAATCGCTTCACCCAGGCATCAACCTGCTACTCCAACACGATGACCACTATGACCGTTACGCCGGATTCGATGAAAGTGAACGAAAACCCCACCCTGCCGCGATAAACCCCCAGGTCACGAACT # Right flank : TGCGGCGAGGTCGCCGTGAACGCGGCGACAGAGTGGGCCCGGCCTCGGCGCCGGAAGGTGGCCCGCGTCCGTGGGGAAGCCGTCAGTCCGGCAGCAGGTGGCCTCGCCTCGACAGCAGGAAGCGTTTGAAGGCGGCCACCGGCGGGGTGTCGGGGTGGCCGTCCAGCCAGGCGACGCCGATCTCCCGGGCTGCCCTGGGGGCCGTGACGGTGAGTTCGACGACTCCGGGGCGGGGTACGGCGGGTGGGGGCAGCAGGGCGACGCCCAGGCCGGCCGCGACCAGGCCGCGCAGGGTTTCCGCCTCTTCGCCCTCGAAGGCCACTCGGGGGGTGAAGCCCGCCTCGGCGCACAGGTCGTCGGTGATGCGCCGCAGGCCGTAGCCCGGTTCCAGGGTGACGAACTTTTCGTCGGCGGCCTCCGCGAGGCGGATGCGGCGGCGGGTGGCGAGGCGGTGGTCCTCGGGGACGACCAGGCGCAGGCGCTGTTCGTCCAGGCGGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //