Array 1 8750909-8741225 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017174.1 Myxococcus xanthus strain MC3.5.9c15 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8750908 37 100.0 36 ..................................... ACCAGGATGACGGCCATGTCCCCCAACATCCACGGG 8750835 37 100.0 35 ..................................... GTCTGCCACCTGGGTCATGACTTCCTCGGCGGGTA 8750763 37 100.0 33 ..................................... GTCGGTCATCCACGCTCCCCAGAGAGAGGAGTT 8750693 37 100.0 33 ..................................... TGTACGGGCAGCCCGGCTCTGAGCAGCCGGTCC 8750623 37 100.0 38 ..................................... ATCGAGGCCGCGAAGCCTAAGGCGTCGCTTGCGTGGCG 8750548 37 100.0 35 ..................................... CCCGCTCCACCTGGGCGATGGCGCGGGCATACCCA 8750476 37 100.0 33 ..................................... CTCTGGCACGCGCAAGGCGTCGGGTCGCGGCCC 8750406 37 100.0 33 ..................................... CCCAGCGTGCGGCGAAGGCACGCATCGACGAGA 8750336 37 100.0 34 ..................................... TCCTGTGCTGCGTTGTTGCCCCCGGGCACGGTGC 8750265 37 100.0 33 ..................................... ACGTTGCCGCCGAGCCCCACACCGGTGCTCTTG 8750195 37 100.0 33 ..................................... ACCTTCGACCGGTACGTCACCACGACGTGGCCG 8750125 37 100.0 32 ..................................... GCCCAGTGTGGACATCCCGAGGAGGCGCCCGG 8750056 37 100.0 34 ..................................... TCGCCCAACGTCCCAGCGGTGTGGATGACTGCCT 8749985 37 100.0 35 ..................................... GAGGGAGTTTGGCGCTACGCGTTGCAGCGCGGCGC 8749913 37 100.0 37 ..................................... CCACCACCGCGGCGGTGAAGACCTTGCCGTCCGCGGT 8749839 37 100.0 34 ..................................... CAGGTGCTCACGAAGCGCGCTGACCGGATGCGGG 8749768 37 100.0 34 ..................................... GCCGTCATCCACCCCCACTACCCGCACGAGGCCA 8749697 37 100.0 37 ..................................... TGAGTCCTCCCTCGCTGTGACGTGCGCGCGGGCGGTG 8749623 37 100.0 34 ..................................... AGCTGCGTGGCAACGTCATGCCTGTGAGCTCCAG 8749552 37 100.0 32 ..................................... AGCCCATTTATGGTGATGCTCAAGCCCGGATT 8749483 37 100.0 34 ..................................... GCGCAGGTGGCAACACGGACGGTAATCACTCAGG 8749412 37 100.0 33 ..................................... CAGGACTCGCACTCTGGACACTCCACATCGGCG 8749342 37 100.0 35 ..................................... TTCGCGGACTGGGCCGCGGACGCGATGACGCGCCA 8749270 37 100.0 33 ..................................... GCGAGGTGGTCGTTCACGCGCGCCAGCTCGATG 8749200 37 100.0 33 ..................................... GCTCCACCGAAGCGTGTGAACTGATTGAGCGCC 8749130 37 100.0 36 ..................................... GCCGCACCGTCCTCGTCGACAACACGCCGCCCACCA 8749057 37 100.0 33 ..................................... TAGAGCGGCAGGCAGGGCACGTGGGCGCCTTGT 8748987 37 100.0 33 ..................................... GAATCGCAGGACGCGCAGGATGGCCCGTCCTCA 8748917 37 100.0 37 ..................................... AGTTCCGCCTCCGGCCAGCGAAAACGGACCTTGGAGA 8748843 37 100.0 33 ..................................... TAACATCCGCAGTAACTTCATCGTCTTCGACAT 8748773 37 100.0 33 ..................................... GCGTCCGCGTCAGAAGAAAGCCGCGTCTGCTCC 8748703 37 100.0 38 ..................................... ACATAACTGGCGTTGCCCGTGTACGTGCCCCCACCGCG 8748628 37 100.0 32 ..................................... CGGAAGGTGAACTGGCGGAAGACCCACATCAA 8748559 37 100.0 37 ..................................... TGCGCCAGGGCCACGCCCAAGAAGAGCCCCCAGTGCA 8748485 37 100.0 36 ..................................... CGGTAGTCGAGCTCCGCCTGACGTGCCTGCCAGTAC 8748412 37 100.0 35 ..................................... CCCGCCTCGACGAAGGGGTACGAGAATGCCGGCCG 8748340 37 100.0 34 ..................................... ATCGCAATCCGCTACAACGCGATCGAGGACCACG 8748269 37 100.0 35 ..................................... CCACGCCTTCACCGGCAGCCCCTCCAGATGCGGCG 8748197 37 100.0 34 ..................................... ACGTTCGGCCGCCCCTTGCGAGGGCCGGACTTGA 8748126 37 100.0 33 ..................................... TCGCAGGAGAGGATTGCGCCAACGGTGAGCATC 8748056 37 100.0 32 ..................................... GCGACGAAGGAGCCCACCAGGTTGTGCTCGCG 8747987 37 100.0 34 ..................................... CGCTTGGGACGGTGATGGGCAGGATCGATTCCAC 8747916 37 100.0 32 ..................................... CACTCAGTGGCGAACCCGAGACCGCCCGGCCA 8747847 37 100.0 33 ..................................... ATGAGCTGCCGAATCGCGAGCCCGGTTGCGTCC 8747777 37 100.0 33 ..................................... TCGGGGGGCGAGGATGCGGCGCCCTTCGGCTTG 8747707 37 100.0 32 ..................................... TTGAGCCAGTGGCGGATAGCGCGGGCTACGCG 8747638 37 100.0 33 ..................................... CAGCGCCCGCTCAATCATCTCATCGTCCGTTTG 8747568 37 100.0 32 ..................................... CAGCTTCCGCCGGAGCTGCGCCCGCCGGCAGA 8747499 37 100.0 33 ..................................... AAGCGCCGCATGGGCCAGCAGGTGGACGACGTC 8747429 37 100.0 32 ..................................... GGCGTGGGCGTCGGGGCGATGCGGGCGCGGGT 8747360 37 100.0 35 ..................................... TCCAGCAGGGCATCCACCACAGCGACCAGACCCGG 8747288 37 100.0 34 ..................................... ATGAGAGGGCGTCACGTTCTCGCTGCTCGGCTCG 8747217 37 100.0 33 ..................................... GAGGGCGGGCGAACACCTCGCGCTGCCTCGGCG 8747147 37 100.0 33 ..................................... CCGATGACGGACCGGGCCGCGTACGGGGACGTC 8747077 37 100.0 35 ..................................... GATTGGTGGATGACACCTGAGCCACGAGACGAGCG 8747005 37 100.0 34 ..................................... TCAGCCCGCGAGAGGAAGGCGAGCGCGTACATCT 8746934 37 100.0 34 ..................................... AAGAGAGCTGGCCCGCCGGTCGTGGTGCTGGGCA 8746863 37 100.0 35 ..................................... CTCGCGGCGCACCGGCGCAGCTCCGCGTTCATTCG 8746791 37 100.0 33 ..................................... CGAACTCGCGCATCCTGGGCGTCACCGCGACGC 8746721 37 100.0 34 ..................................... CCTCTCCCGTGCGGAAGGCAGCACATGGCTGAGA 8746650 37 100.0 34 ..................................... TCCGCCGCCATGGCATCCAGCGTCAGCTCCAGCT 8746579 37 100.0 33 ..................................... TCCCTGGCCATCAGCGCCTCCGCCGACGTGACT 8746509 37 100.0 35 ..................................... CCAGTAGCTGCGGGGCGTGTCGTTCATACAATGTC 8746437 37 100.0 34 ..................................... CCTGAGCGCGGCAGACGTCGCTGCAGCTTGGAAA 8746366 37 100.0 33 ..................................... CTGGCCGAGCGTACGAAGGTGGGCGGCCAGAAC 8746296 37 100.0 34 ..................................... CGGGCCTGGGTGGTGCGACGGTAGACGGCGGGGA 8746225 37 100.0 37 ..................................... TCCACCACCTTGCTTGGCGGAGTCGTCCAGACGTCCT 8746151 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8746079 37 100.0 33 ..................................... ACGTTGAAGCTCTTGTGCTTTGTGCCCACCGAC 8746009 37 100.0 32 ..................................... TACGACGCGGTGAGCGCCCACCTGCGCATCAA 8745940 37 100.0 35 ..................................... TCCCGGTAGGCGACGAGGACCTCACGGGTGCCGCG 8745868 37 100.0 32 ..................................... CCCATTTCCGCGCTGATACAGCTCGACACCTG 8745799 37 100.0 35 ..................................... TACGGAGTGAAGGACTTCACGGATACCGCCCAGAG 8745727 37 100.0 32 ..................................... CGCAGAAGCTAGACAGCACCCGAGCGCTCGTC 8745658 37 100.0 33 ..................................... AGCACCCTCCATTCTCGGCGCCCTCATTGAGCG 8745588 37 100.0 36 ..................................... GCCGGCTGGAGCCCGCCCGGGTGGCGGCATGAAGAA 8745515 37 100.0 32 ..................................... GAGCAGTGGCGGGGCAAGCTGGAGCTGCTGGG 8745446 37 100.0 37 ..................................... ACGAAGTCCAGGCCCATGTAGCGCGCGAGGTCGCGGC 8745372 37 100.0 33 ..................................... TCCTTCGGCGTCTTCGCGTGGAGTGCCAACGCT 8745302 37 100.0 35 ..................................... GCATTCCCGGGTTGTCTGTACTCCTGGCTTGCCAT 8745230 37 100.0 32 ..................................... GGCGTGGGCGTCGGGGCGATGCGGGCGCGGGT 8745161 37 100.0 35 ..................................... CGTGGGCCGCCGCCGCCAGCCCTGACCCTCGCAAT 8745089 37 100.0 36 ..................................... GCCGACACACCCCAGGGCTGGGCCCAGCGCTGGCAG 8745016 37 100.0 34 ..................................... CGCCGCTCCGCGCCTGGCGCGGCTTCAGCGTGTT 8744945 37 100.0 34 ..................................... ATCCAGGATGATGCTCGTCACGAGCGCCCGGTTG 8744874 37 100.0 33 ..................................... GCCTGGTGTTGGGGGACTGGCGACGATTTTACG 8744804 37 100.0 33 ..................................... TCCTCGGCGGGAACCTGGGCGGGGGCCCCGTCC 8744734 37 97.3 33 ......................G.............. ATCGTCGACAACCTCACCGAGATTGACCTGGAC 8744664 37 100.0 36 ..................................... GCTGCGTCATCCGCCTTGGCCTGCCCCTCCTCGGAG 8744591 37 100.0 32 ..................................... TTCTCGGGGGCGATGGGGGCGCCGCCTACGAT 8744522 37 100.0 33 ..................................... CCGCCCTGCACCCGTGAGCGCGGGAATCCCCAG 8744452 37 100.0 33 ..................................... CGGAAGTCGACGGCCACTTGGTACTGCGCGCGG 8744382 37 100.0 32 ..................................... CTCCCCCATGATCATGGCCCGGAGCCCCGGCG 8744313 37 100.0 34 ..................................... GGGATGATGGCGTCCTCGCGGACTGCCAGGAACT 8744242 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8744170 37 100.0 33 ..................................... GGGTGCAGGAGCCGCCACGGAGCGAGTTCACGT 8744100 37 100.0 33 ..................................... AACGCCCGCGCGGCGAAGGCCCTGGAGCGCGAG 8744030 37 100.0 35 ..................................... GCCCTCTGGCGGGTGGCGCTGCGTGAGAATGCAGT 8743958 37 100.0 34 ..................................... ACTTCGGCCGCCATCGCCTCCAACTCCGTGAGGC 8743887 37 100.0 35 ..................................... AAGAGGCTCGTACAGCGCCAGTTCGCCCGTGCGAG 8743815 37 100.0 33 ..................................... TCGGCAATGGTCCGGAAAGCGGCGCAGCTAGTC 8743745 37 100.0 35 ..................................... CCGGCTTCCAAGCCCTCCTCGCCTAGTCATGTCCA 8743673 37 100.0 32 ..................................... TAAAGGGCCCTCGTGATGCTGGACGACGACGA 8743604 37 100.0 35 ..................................... GCGCTCGCGGCCCGGTGTGACTTGGACGGCATCCG 8743532 37 100.0 33 ..................................... GGCAAGCACCGAGTTGACCGTCGAAGCCGCTCT 8743462 37 100.0 33 ..................................... CGCGTTGAGCAGTACCGAGGCCTCTTGGAGCGC 8743392 37 100.0 34 ..................................... CGGCAACTCGACGGTGCCGCCCGATTCTCGCGCT 8743321 37 100.0 35 ..................................... TGGTAGGGCATGTGCGTGTCTCCTCACTCCGCAAC 8743249 37 100.0 32 ..................................... ACCGCTACCAGGACTACCTCTTCGCCGTGAGA 8743180 37 100.0 35 ..................................... CGCTACCCTTCCGGGTGCAACTCACGGGAGGACGT 8743108 37 100.0 34 ..................................... ATCAAGAACCTGGTGCTGCTGTGGTGCCACGACA 8743037 37 97.3 35 .......T............................. CTCCAACGCATGCGGCCCAAGAAGCGCAAGCCGAA 8742965 37 100.0 34 ..................................... ACCGACGCCAGTCCCCTGCGCGACGGCCGCCCAG 8742894 37 100.0 35 ..................................... GCATGTCTATCTCCTACCACCGAAAGAGGCGCCCG 8742822 37 97.3 32 .....................A............... GCGTTGAGGTAGGCCTGCTGCATCCTGGAGAT 8742753 37 100.0 34 ..................................... TTGGCGCTCCGAGCCGCAAGCATGGCATCGGCCA 8742682 37 100.0 33 ..................................... CCTCCAGGCGGCACCCTCCAGGACGCCGGCCCA 8742612 37 100.0 33 ..................................... TCCTCGTGGTAGCGCGCAGTAGAGTCGTCGCCA 8742542 37 97.3 35 ...................A................. CTCTCGCACAACGCGAAGCGCGCGGACCCGGAGGC 8742470 37 97.3 36 ...................A................. CGGAGAAAGTCCGCGTAGACCTTTGCCGGCGTTGAA 8742397 37 94.6 32 ..T................A................. TTCTTCAAACAGTGGGGAGCGTGGGCGCCTCG 8742328 37 97.3 32 ...................A................. CTCTCGTGCGAGCCGCTCCTCGGGCCGGTGGT 8742259 37 97.3 37 ...................A................. ATCAACGTAGAGGGGGTGATGGTGGAGCAGCTGCGCC 8742185 37 97.3 34 ...................A................. CCGTGCGCGTCGCGTCCGCGCACCACCGCGTAGT 8742114 37 97.3 31 ...................A................. TGGGCCTTGTTGAGCATGGAGATTTGTCGTC 8742046 37 94.6 33 ...................A...A............. CCCAAGCGCAGGCAGCGCCGGGAAGGCCGCGCC 8741976 37 97.3 34 ...................A................. CCGTTTCGAGAATCACTCATGGCAGAGAACATCA 8741905 37 97.3 32 ...................A................. CCGAGCACCATCTGCGAGCAGCCATGGTCCAG 8741836 37 94.6 36 .C.................A................. TCGAACAGAGCCACGTCCTGTGTCCTCCGGTGTCGC 8741763 37 94.6 33 ...................A....A............ CACGCACAGAACAGAAGGTGCGCCCGGCGCGCG 8741693 37 97.3 35 ...................T................. CACGTGCACCGCGAGGTGGTGGCGAACCTCCGCAA 8741621 37 100.0 36 ..................................... TGCGCGGCCTCACGCGTGTTCCACTCGGCCTGGTCG 8741548 37 97.3 33 .................A................... CACACGTGCCTGCGGGCAGGCGCATCCGTCGTG 8741478 37 97.3 35 .................A................... GCCAGGGTCGGGCAAGACTCGTGGCCGGGGCTATG 8741406 37 97.3 37 .................A................... ATCTCCGTAGTTGGCCGAGCTGTGGACAACCTCTCGG 8741332 37 91.9 34 ..........A......A.........A......... GTTTACGGCACCTTCCACGAGTCCAGCCTGTACG 8741261 37 91.9 0 ...................A...........C....G | ========== ====== ====== ====== ===================================== ====================================== ================== 137 37 99.4 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CTCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATCGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCCCCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCGGCCCCGGTGTGCGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCGAATAGAATCAGCGAGTTGGGTGAGTGGGGGCAGGAACGGCGGGGCGCTTTCGTGGCCGCGCAGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACGCTATGTTGGAGAGGCAGA # Right flank : CACCCAGAGCACTGGAGTCCCGGTGCCTCGTCCTGGTCACTCCTCATGAACGCGAGGACTTTCTCGCGCTTCAACTGGTCCGAAAATTGGGGAGCAGATCACGAGGACCCGCTCGTGCTCAGGGGCCAGAAGTCGCCGGGTATGCCCAATACACAGCACTTCTGGATCGAGGTCTTCGGGATGGCCGTTTCAAGCGCAACGGCTCGCTCCTATCCGACGTGAACGCGGCCGACGCGCATCGGCTCACGACGTTGCTCATCGCCGCGCGCCGGCTGGACGAATACAAGGAAGATCGCAGCGCCCCTCCTCCCTTTGTACATGCCCGGCAGGTGACGACGTCCGAATCCACCGTGGACGGCCAGCGCACGCGTCTGACGTTGGACATCGACACGCCGCCCGACACCCTCCGCGTCATGCAGCAGGTGGCTGCCGCTTACGGCATCGAACTGTGAGCGCGAGGACCCCGGGCGCCCCAGGGCTGGAGGAACACCTCCGTCTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 9029862-9026813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017174.1 Myxococcus xanthus strain MC3.5.9c15 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 9029861 36 100.0 36 .................................... TTTCGCAGGTCCACCGCGCAGCGGCAGAGGTGCCAG 9029789 36 100.0 35 .................................... GGGACAGGACTGTTCAATCGGCCAAGTCTACGACC 9029718 36 100.0 33 .................................... ACGGTGGATGTATGACACCGCGCGCGTCCAGGC 9029649 36 100.0 35 .................................... ATGCGCTCGCGGGCGGACGCAACCTCCGGGAGGTT 9029578 36 100.0 36 .................................... CCCGCGACTAGCTGAACAGCAACGCAACGCACAGGA 9029506 36 100.0 34 .................................... TCCCAGCCACCTCAGCCCGCACCTGAGCCACCAG 9029436 36 100.0 35 .................................... TCTAGCACTCCGAATTCAACACCCTCCGGGTCAAG 9029365 36 100.0 35 .................................... CTCGGGGCCGGCGCTCACGTAGCGCAGGGAGCATC 9029294 36 100.0 37 .................................... GTCTCGAACCTCTTCGGCGGCGCGGCGGATGTGCTTC 9029221 36 100.0 36 .................................... TTGATGTCCAGCGCCTCCATCAAGAGCGCGTAGGGG 9029149 36 100.0 34 .................................... CTGGAGTCCCTGGCCGAGGGGAAGACGGGCGAGA 9029079 36 100.0 34 .................................... ACGAGCGCGCGGTACGACAGCAACGCCGCGCCCT 9029009 36 100.0 35 .................................... GGCGCCCCAGTGCTTCAGGACGGCATGCAGGACGT 9028938 36 100.0 36 .................................... TCCCAGCCATGGCCTTCTCGATGAAAGGCGCGGGCC 9028866 36 100.0 37 .................................... GAGCACCCGCATTCGGAAGTGTGTCAGTGCGTGACGT 9028793 36 100.0 35 .................................... TGTCTGCGCGCGTCCAGCGGCGAGTGAATCCGCCT 9028722 36 100.0 35 .................................... TCCTCGTTGACGTGCCCATCCTGAACATCTTCAAG 9028651 36 100.0 34 .................................... AGTTGAGCATCGGGGTAGTGGGCAGCAGCTTTCC 9028581 36 100.0 37 .................................... ACCCACTTCCAGCCGCGTTGGTCGCCCTGCACCACCT 9028508 36 100.0 35 .................................... GTGGCCCCTTCGCGGTCCCGCAGGTACAGCTCGGG 9028437 36 100.0 39 .................................... TTGACGAGCAGCTTGCGCAGGCGCTGGGGCACCTTGCGG 9028362 36 100.0 33 .................................... TTCCTGCCGTACCTCGGGGCGGGCATCCAGGGG 9028293 36 100.0 37 .................................... TGCTCGCTCCTTTGGGAAATGCTGTTGCGGATGATGG 9028220 36 100.0 32 .................................... GCCGAAGAGAATCAGGGGACACCGGAGGCCAC 9028152 36 100.0 39 .................................... ATCTGCTCGACGGCGAACTTGCCGACGCCGACGCCGCGC 9028077 36 100.0 33 .................................... CCCAGGAGCCCCTGGCGCAGCGTCACCTCTTGG 9028008 36 100.0 36 .................................... AAGTCATACGCCGCTTCATGTGGCTTGAGTGCATCT 9027936 36 100.0 36 .................................... AAGTCATACGCCGCTTCATGTGGCTTGAGTGCATCT 9027864 36 100.0 34 .................................... CGTTCATACGCTTCCGCACACCACTTGGAGGTCA 9027794 36 97.2 37 .....A.............................. TTCTCAGGCACCTGCGGCATTCTGATGGTTCCGCGTT 9027721 36 100.0 35 .................................... CGGACCTCCAGCGCGAGCGCGTCAAGCCAGTGCCC 9027650 36 100.0 35 .................................... CCCTGCTGCAGCCGCAGTGGCGCCAACATGGCCCC 9027579 36 100.0 36 .................................... CCCTTCAACGCGCCGGCCGGACTCGTGGAGTCCATC 9027507 36 100.0 41 .................................... AAGTTCAGGGTGCCGCCGTGATACAGCGCCAGCACACCGAC 9027430 36 97.2 39 .......................T............ ACACCACGGGCGATGTCTGCGAGAGCAGCCTGGGTCATC 9027355 36 100.0 40 .................................... ACATCGGCCTGATGTTCGGTGATGCGCTGGCCCTTCTTCA 9027279 36 97.2 36 .........A.......................... TATGACAAGCTCGTCACCAACTGGGAGGACTGCTAC 9027207 36 97.2 35 ...........................T........ TTGCCGCTGTTCGCCTGCTCCAGGCGCTGGCAGAG 9027136 36 100.0 36 .................................... TTCACCAAGGGCTTCTTCGAGGCCACGGTGGTGCTG 9027064 36 97.2 34 ..T................................. TACCCTGTCGTGGCGTTGATGGTGGCGCGATGAG 9026994 36 97.2 40 .........A.......................... CCGAGATGGAGGAGTTGGGCAAGGCGGCGACGGCGCGCAT 9026918 36 100.0 34 .................................... AGTCCGTCCACCTTGGCGTCGCCGATGATGCGCG 9026848 36 94.4 0 .................................T.A | ========== ====== ====== ====== ==================================== ========================================= ================== 43 36 99.5 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : TGACCCGCGGCGGTGGCGGAAGGTGCATGCCCTGCTCAAGGGCTATGGGGAGTGGTTGCAGCTCTCCGTGTTCCGCTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGTTGTCGCGGCGGATGGATGCCGTGGATACGTTGTTGGTGATTGGGCTGTGCGGCGGGTGCGTGGAGCGCGTGCGCACCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGTAGGCGACAATCAAGCACCTCGCCGTGGCGGAGGCCCGCGACGGCGAAAACGGCGGATTTCTTTGTGGTTTCATGGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGAGTGGTTTCATGGAGTTGGCGATTCTGGGTAGGGCCTGGGACAGCCAACCTGGGGGAAGGAGGGGGAGATGCTTGAAAGGGGGCTTGTAAGGTGCCGGAATTGCTGGGAAATTCAGGCGGGCT # Right flank : TTTTGCGAGAACGTCAGGGACTCTGTGAAGTGGTCGTGATGGGGGCGCCCTGGGCACATCCCAGCGTCTGAAAGAGTCGTTGACCGGACGCCTATTGCCCGCGCCCCCGCTTGTCGCCTTGTGGACGCCGTTAGCAGCGGCCCTGACCCCAGGTGGCCCCCTTCAATGCTTCAGTTCGTGGACGGTAGCCGTAGGGCCTTGCCGAACCCTTCGTTCAGTTCTCTCTGGAATGCCGGAAACCGTGAGGTGCGCGTGCGCAGGGCTTCGGCCCACGCGGGCAGCGCGGCTGTCGTCACGGGGTCGGCCTCGAGTTCCACGCAGCACGCCACGAGTATCGCCGCCTGGCGATAATGACCGTGCCGCTTCTCACGGAGGATGTCTTCGGTCCTTCGCGTGGCGGCGGCCTTCATCGCCTCGAGCAGCGTCCGGCGGTCCGCTTCCGAGCATCCGCTCATGACCCCTGCGCGCTGAAGCAGGTCGCGCAGCGTCGGGGTGGGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 9061441-9058302 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017174.1 Myxococcus xanthus strain MC3.5.9c15 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 9061440 36 100.0 34 .................................... TAGCTGTCGGTGATGCAGGGCAGCACGTTGGTAA 9061370 36 100.0 37 .................................... GTCCCGCCGCGGCGAATCACCACGCTGTCGCCCTGGT 9061297 36 100.0 39 .................................... CGAACCAGGCCCGCCAGGCTCGCGGTCTGCGCGCCCGGG 9061222 36 100.0 37 .................................... TCGAGTCCAAGATACCGCTTAATCCAGAGCTTGAGGT 9061149 36 100.0 37 .................................... TGCGGATGTAGCTGATCCATCTCAAAGCACAGATCAC 9061076 36 100.0 35 .................................... TCTCCGGGGTGATGCGTCCCTTGAGGAGTTCCGAG 9061005 36 100.0 39 .................................... TCGCAGCGGTGGCACACCAGGACGGAGGGCAGCAGGCGG 9060930 36 100.0 37 .................................... CGGCCCGGGACGTGACGGCGGACACCGTCTTCTCGGG 9060857 36 100.0 36 .................................... CTGCGCAAGAAGGGCGATTCGCGTGGCGAGGTGATT 9060785 36 100.0 36 .................................... TGGGAGCAGTGAAAGGAAGGTAAGGATCATGCACAA 9060713 36 100.0 35 .................................... TCCCCAGAGAACAACTTCTCCACTTCATCCAGGAG 9060642 36 100.0 37 .................................... GTTGGGTCCGTGCAGTCGCCGCAGACATCCAGCTTGG 9060569 36 100.0 37 .................................... TCTCCCTCGCATCCCGTATCGCCATCAGCACATCTCT 9060496 36 100.0 36 .................................... ATTCGCGGCACTGGCCAGCGGTCAGGCACGTAAGCC 9060424 36 100.0 33 .................................... ACGTCTGGGGCACCACCAAGGGCGCATTCCAGA 9060355 36 100.0 37 .................................... CGCACCGGCAAGTTTCACAAGGTGCTGGGGACCTCGG 9060282 36 97.2 34 ...........A........................ CTGAACACCCCCAAATCCTTGATGAGCTTCCCCA 9060212 36 100.0 39 .................................... CAGTCCCCACGCCCGTGGTGCGAGGATGGCCACGACTGG 9060137 36 100.0 36 .................................... CTCGCGCTCAGGATGATGATGGCGCCAATCAAGGTG 9060065 36 100.0 35 .................................... TTGAACGTTGTGTTGAGGTCCGTGGGGATGGTCGC 9059994 36 100.0 36 .................................... TCATCACCGGCTTGCCATCTTCACCCAGTGCGCCTG 9059922 36 100.0 35 .................................... CGGTTCACGCCGGACCGCCCGGCGAGCCACAGCAG 9059851 36 100.0 39 .................................... TTGGCCATCATCGGGCTCATCATCTACGCCGCCTGGAAG 9059776 36 100.0 36 .................................... CCCCTGAGTGCGCTCCGGAGCGTCCGGAAGAACTTC 9059704 36 100.0 36 .................................... CTGCGCAAGAAGGGCGATTCGCGTGGCGAGGTGATT 9059632 36 100.0 36 .................................... TGGGAGCAGTGAAAGGAAGGTAAGGATCATGCACAA 9059560 36 100.0 35 .................................... TCCCCAGAGAACAACTTCTCCACTTCATCCAGGAG 9059489 36 100.0 37 .................................... GTTGGGTCCGTGCAGTCGCCGCAGACATCCAGCTTGG 9059416 36 100.0 37 .................................... TCTCCCTCGCATCCCGTATCGCCATCAGCACATCTCT 9059343 36 100.0 36 .................................... ATTCGCGGCACTGGCCAGCGGTCAGGCACGTAAGCC 9059271 36 100.0 34 .................................... GCCTCGCGCTCCAGGTCTCGGGGCAGGAGGAGAT 9059201 36 100.0 37 .................................... TTAAAAACGTTTGCCTGATAGTCCTGCGAGGACTTCA 9059128 36 100.0 38 .................................... TTCGTGGGCGGCTCCGTCTCGCAGGGCTGGTCAATTCG 9059054 36 100.0 37 .................................... CGCACCACTTGCCCGGTGTCCTCGTCGCGCTCCGGAA 9058981 36 100.0 35 .................................... AGACAGCACCTCGCCGGGGTCGGCTGACCGGCTTG 9058910 36 100.0 34 .................................... TTGTAGCGCAAGTCGACAGCCGCCCGCCCCTGGG 9058840 36 100.0 38 .................................... TAGGAAGTCCGTGGCGGTGCGGATGCCGCTGGTGCCAG 9058766 36 100.0 34 .................................... CGAAGCGGGGTGACGTCATATCGCGACTTTGCCG 9058696 36 100.0 38 .................................... GTACTTACGTACTGGCTGGCCAGCTTGAGCATCAGCTT 9058622 36 88.9 33 ....T.....T.......T............G.... TCGAGCGTGTATTTGAACGGGATGTTGAAGATG 9058553 35 88.9 37 .G.T....T..........-................ TCCACACGAAAGTACAACGAAGACCATGCTTCCTCCC 9058481 36 97.2 37 .................................G.. ATTGCCGCTGCCTCCCCCTGAATGGGGAAGTTGATGG 9058408 36 100.0 34 .................................... TCGTAGCCCACGATTTGGACGTTGACGTTCGGAG 9058338 36 97.2 0 ........................T........... | C [9058333] ========== ====== ====== ====== ==================================== ======================================= ================== 44 36 99.3 36 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TTCTCCGTGCTCTGTGCCAGGGGGGCCTTCGTTGCACGCGCGCGGACCTGGGCGTCTTCACGCTGCGCGGTGAGCGCGCCGCGGGGGATGCGCTGCGCCTGATGGGCTGCGGCTCGTTCCTGCCGCCGCGGCCCGTGGCTCGGGGCGCCCCGCTTCGTGGGGAGCTCGCGAACGCCGCTTGAGCGGATTGTCGGCTGGGCAGGGGCCTTGCAGAACTCCGCCCGGCGGGGCGGCGCGGGGGAGTTGTGCGATGGATGGTATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCTCGAAGTGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGATTGATGAAAAGCTGAGTGATCTCAGGTGGTTCGGATTCCTGGGTAGGGTCCGGGAGCCACAACCTGAGTGAAAGCGGGGGAGGTGCTTGAAAAGGGGGGTGGTAAGTTGGCGGAACTGTTGGGAGATTCAGACGGGCT # Right flank : TTGGAGCGCGGAGAGCTCCCGCCATCGCCCGCGCCGGGCTGGCGGGGGCGCTTGCCGCTGGGCAGGTCGCGGAGAAGGCCTCAGCGATTGCCGTGCTGGAGCAGTTCGACTCCTGGGGCGACAAGTGAAGCTCGGCGCGCTCGTGCTGGCCCGGCTGGTGTCGCTTCCCGCGTCGGGCGCGGAGGTCATCGGCGTCGAGCGCGCTCAGCTCTTCCCGGATGGAGGTGCGACAGCCGTCGAGGTGGAGGGCAGCTGCTGGCTGTCGGAGAGCCGCTGCATTCGAACCGCAGCGGAGATTGAGCGGCTGCGCGCCGAGAATGAGTCGCTTCGCCAGCAGGCGGGGGACGTGTCCCTCACGGTCGCTGTCGTGGCCTTGCTTGTCGGGCTCGGGGCCGGGTTCACCGCTGCGAAGCTGGCGAACTGACAGTGGGCGGCTGCGGAATCGGCGCGGTTGGTCTGGGACCTCGCAACGCCATGAACTGCGTACTCACCGCAGTCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //