Array 1 1151498-1150274 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAALNG010000001.1 Clostridium perfringens strain CP-07 1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1151497	    36	  86.1	    30	A...ACA...A.........................	GCATGAATTATTCCTGATAGTTCTTCGCTT	A,A [1151483,1151489]
   1151429	    36	 100.0	    29	....................................	AATACCTTTTATACCTCATAAGGACGAGT 	
   1151364	    36	 100.0	    30	....................................	ACATCTTATGGAAAATATTTGTTTATAGAA	
   1151298	    36	 100.0	    30	....................................	TCGAACGCTTTAGATTTAATCTTAGATGCA	
   1151232	    36	 100.0	    30	....................................	TGTAATGCTTTATGAACTTAATAAAACTTT	
   1151166	    36	 100.0	    30	....................................	GAGTTAACGGATGCATTACTAATCCCAGGA	
   1151100	    36	 100.0	    30	....................................	GAAGTAGAAATAGTAGAAACTGGAGAACTA	
   1151034	    36	 100.0	    30	....................................	GTATTAGAGCAAGGAATAAATCAAAAGCTG	
   1150968	    36	 100.0	    29	....................................	CATCTTTAAATGATTGTGTTTTTATAACA 	
   1150903	    36	 100.0	    30	....................................	ACAGCTAAACTTGGTATCAATACAATTTGG	
   1150837	    36	 100.0	    30	....................................	ATGATAATTATGATTAATGAGAGAGTAAAT	
   1150771	    36	 100.0	    30	....................................	TATATCGTAGGATTTAATGCCTTTAATGTA	
   1150705	    36	 100.0	    30	....................................	GAGCTAATAAAAGAAGATGAAGGAATAGTA	
   1150639	    36	 100.0	    30	....................................	ATAAAGCAACATTTTGCAATACTTGTAAGG	
   1150573	    36	 100.0	    30	....................................	TGTCTTCTTTTGAAGCATTTACTTCTTTAA	
   1150507	    36	 100.0	    30	....................................	GATCTCTTGCATCTTAAGTTCCCTATGTTC	
   1150441	    36	 100.0	    30	....................................	CCATTTTTTATAGTGGAACATTTACCAAAA	
   1150375	    36	 100.0	    30	....................................	TTTTTCTATTAATTTAACTTCAATTATTGT	
   1150309	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.3	    30	GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	                              	       

# Left flank :   AGTTTCTAAAAGCAGCAAGTCTATCCTTATTCTTAAAGAAAGTATTGTAAAAAGTAAATGCTTCCTTAAGATAAGGATTATTAACTTTCAATTCTCTCATAATAACAGTAGCTCTATCTGTAGAAAATTCCTCACTATAAGATAAAATATCATAAAGCCAATCTTCCTGTGGTTTAGGTTTTTTCATATTAGAATAAACTAGAATATTTCCATCTACATTTTCTTTTTCTATATGATATTTAGTATAAAAAGCATTGTTATCATTTAACTTAATAAGCTCAACACCCTCTAAATCAAATTCATCTATCTCTTCAGTAAAATCCTCATTTTCATCATACCAGAAAACAATATGACGTACTTTTCCATCACCTAATGGTTTTGAAAAAATATCATTAAGGAAATTCTTAATTTCTTTTAAGTTCATTTGTCACCTCTAAATAAAATTTTATAAATATTTTTTAAATTAATATATAATAATATAATAACTTAAAAGTAATAAA
# Right flank :  AGGAACTAATGAACCCCTTGAAACAACTAATTTCAAGGGGTTTTTACTTTCTAAAAAACATTCAATTGCCGTGAATTTATCTTCTTTTCCTGCTTTTTTGGTGATCCTACTAAGAATTTCATTTCTGTATATTGCTTTTCTGTAATCTGAAGATATCTTACTGATCCTTTTGGTGGTAAATTTTCTTTTAGTCTTGCTACATGTTTATTTACTCCATCAATACCATTACATATTCTTGAGTAAACAGAAAACTGAATCATTAAATACCCATCATTTAATAAAAATCTTCTAAAATTTTGATATTCTTTTCTATCTTCTTTTTCAACAACTGGCAAATCAAAAAATACAAGTATTCTCATAAACTTTTTACTCATAATAATGATATTCCAAAGGCTTTATCTCTGGTAATTTTAATAATCTAAAATCTTTTTTACTGCAAGCTGTTGTATAAGAAGATATCATTTTATCAATTCCATTTAAAATAGAATGATTTTTTCCAT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [68.3-96.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.77   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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