Array 1 54866-54164 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMEG01000008.1 Caballeronia grimmiae strain CGMCC 1.11013 sequence08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 54865 29 100.0 32 ............................. GGCCGGCGGCCGAGCTGTAGCCGTAGCTCGTC 54804 29 100.0 32 ............................. GCGCTGTGCCGGTCCCTCAAGTGCTCAAGCCG 54743 29 100.0 32 ............................. ATCGAACATGCGGACTCCCGCCTTGCGGAGCG 54682 29 96.6 32 .........................C... GCGATGGCCCATAAGGACCAGTATCGGCTCGG 54621 29 96.6 32 ......................A...... TGCTGCTGTGCATTCATGCGGTCCTTCTCGTG 54560 29 96.6 32 ...........A................. TGGTAAGCCCGATTGATGGCATCACGGAAATC 54499 29 96.6 33 .....T....................... CCTGAACGAGAGGGATGCCGGAACCGGAGGGGG 54437 29 100.0 32 ............................. ACTAGGGCCGCTTGGTCCCGAGACATAGCACC 54376 29 93.1 32 ....T..................T..... GTCAGATAAGCCCCGGGCGGCACTTTCGCGTA 54315 29 100.0 32 ............................. TGAAGAAGTGCGGCGGCTTCACGAGACATGAC 54254 29 93.1 32 .......................TC.... CAAGTGGAAGCCGTCAAGGAGACGGTCAAGCC 54193 29 75.9 0 .........A.A...C..A..CC..C... | C [54191] ========== ====== ====== ====== ============================= ================================= ================== 12 29 95.7 32 GGTTCCTCCGCGTGCGCGGAGATAGACCC # Left flank : GACCGGCTCGTTCGACGCGAGGCGGCGCGCGTGTTTCGCAAGCAGCAGATCATTCCCGCGATGATCGATCGCATCAAGCAGGTGTTGCGGCTCGAGGAAAAGCTGGAGGAGGCGGATGGCGCTGGTCGTGGTGGTGACGCGTGACGTGGCCGACAGGTTTCGCGGGTACTTGGCGTCGGTGATGCTGGAGGTGTCGACGGGCGTGTACGTCGCGCCACGGATGAACAAGGGCGTGCGCGAGCGGACGTGGTCGGTGCTGGCTGACTGGCATGGACACGAACCGAGGGGCAGCATCGTGATGGTGTGGCGGGAACTGGACGCCGTCGGTGGCGTTGGTATCGCGCAATTGGGCGCGCCGGTGAGGGAACTGGTGGATGCGGACGGGATGTATCTGGTTAGACGCGGGTTGAGGTAGGCGGTTGGCGTTCTTCAAAAATTAGCGATTCTTGGTGGATCGGGTGGCGGGTTTCGGGGTTGGTTTCATGGGGTTATGTGGGAGA # Right flank : TTCGTCGTCTGATTTGTATCAGCCGATACTGGACCGGACAGACAGTGACCGATGCATCGCCGTCTGTTTCGTCCCTCGTGGCATCACTTCTTGAAGTCTCATGGGCTTCCCTGGCCGGCTAAAAGCAGCTTGCAAGAAAGGGGGGCGACCGAGACTGAACAAGAAGTCATCGGACGTTGTCTGTCGAGTCAAATCCTGCTGGCTACATCTGATTCGCTCCATCGCTGATCCCGATTCCCCCAACCGCACCGCAACAGCCCCAACCTCACCACAACCGCAAGCAAAAGCGACCAATCCACGCCCTCAAAAAGTCGCTCTCAACCAACCCCGCGTCGCATTCCCCCCATCGAACGCCGCTGAAACCCCCTACTCTCCCTTCAGGGCCGCGAGCATCGCACGCAGAGAGAAAGCCCGCGCCTGCCGTTCACGAATCCAAGGAGACGTATCAATGAGCACCAATCGCGGCGTCGTATATCTCGGTCAGGGCAAGGTCGAGGTCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCTCCGCGTGCGCGGAGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 64054-66034 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMEG01000008.1 Caballeronia grimmiae strain CGMCC 1.11013 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64054 29 100.0 32 ............................. CTGTACGCGGAGCAATACCACGTGACACTTCG 64115 29 100.0 32 ............................. CTGTACGCGGAGCAATACCACGTGACACTTCG 64176 29 100.0 32 ............................. CGCCGACACGGCGGCCCATAGATGCGCGAGGA 64237 29 96.6 32 ............................T TGCGCCAGACGAAACAGGCGTCAGCTGATGCG 64298 29 100.0 32 ............................. CGGAGACAAAATACCGGACTCGGTTCGTTGAG 64359 29 100.0 32 ............................. GTGTGGGCCAGCTTGCCCGGCGCCGGGTACGG 64420 29 100.0 32 ............................. TTCAGACTATCGCCTGAAGGCAAGGTATGCGC 64481 29 100.0 32 ............................. ATCGCGGGCGGCATCGCTTCGAGCCTTCGCTG 64542 29 100.0 32 ............................. AGCGCGGTTCCTACGCTGCGATCGCCTATCGC 64603 29 100.0 32 ............................. GAATATCATGCGCTGTGCGTTCTCGGCAAACG 64664 29 96.6 32 ............................G TCTTCAATCCATACGTCATCACGATACGGGTA 64725 29 100.0 32 ............................. ATTGCGCTACCCACTGCGGTGACTGCGCTACC 64786 29 100.0 32 ............................. ATGACGAGCTTTGGCGACAACCGGAACGTCAA 64847 29 96.6 32 ............................T CAATGAGGCGCTCACATCGTGCGCAGCCGCAT 64908 29 100.0 32 ............................. CAGCATCCGCATGCCGCGCACCGCCAAACGTC 64969 29 100.0 32 ............................. CTCGCCGAGCGCAATGAATCCGCTCCCTTCCA 65030 29 96.6 32 ............................T TGGTGGGTGATCGGTTCTAGATGTACTGGTAA 65091 29 100.0 32 ............................. GAAACGGGCGCTAGCGGAGCATGGCGCGTACC 65152 29 100.0 32 ............................. CCGGCAAGCGGATTGGAGTCGAGGATTTCGTC 65213 29 100.0 32 ............................. TTCGAGACGAAGGGCAAGTGGGGGCAACAGCT 65274 29 100.0 32 ............................. AGCACGGGGGTCACGATGACGCTCACGTGTCA 65335 29 100.0 32 ............................. GGGACGCCCGCGCGCTATCCCACTTACGCGGC 65396 29 100.0 32 ............................. CAATCCTCTTCAGTTTCCCCGTCGACGTCGGC 65457 29 100.0 32 ............................. AAGACCCGTCCAGTGCGCCCGCGAGGCGGCTA 65518 29 100.0 32 ............................. TGAGGCTCTGCCGCGTCGATAGTCGTGCGCAT 65579 29 100.0 32 ............................. CAGCGGGTAGTTGCCCACCTGCCACGGTAGCC 65640 29 100.0 32 ............................. CGGAGGAGGTCCCCGCCCATTTCCGTAAAGTC 65701 29 96.6 32 ............................G CGGGCGGTCTCAATGAAATCTGCCGCGACAAG 65762 29 100.0 32 ............................. GGGCGAGCCACTCTCGGGAAAATCGAATGTCA 65823 29 96.6 32 .....T....................... AACGGCGGACCGGCGTTTCCTGCTATGGATGG 65884 29 100.0 32 ............................. GCCACGCGCTTTCTAATCGATCAGGTGCTGGC 65945 29 100.0 32 ............................. AAAGTGAATAAATCGTTTGTACTGCGTACTTG 66006 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.3 32 GGTTCCTCCGCATGCGCGGAGATAGACCC # Left flank : GCTCGACCGGCAACGGTCTGGAAGGCATGGCGCAAGCGCGTGCGTTCTTTGACGGCTTCGATGAAACAGGCGGCGACGTCCAGCATGTGGTCGCCGAGGGGATGCATGGTCTCGCGGCCACAGTCGCTGGTACGCAGCTTTCCCCAAGCCTGTAGTTGATGCGCTACCGTTTCCATTGTTGCGTCGTGTGGTCTGGATGCCGAGTTTTTTGCCTAAATCATTTACTTCGCTATGCTTAGATTATCACTAGGATCGATCGTTTGACGGCGGTTCGAGTGTCAAAGTTGATCAATGATAATGAGCAGGATTGTGAGGCGGTGGTTATTCGAATCGAGATTGCGATAGTTGCTTGTAGGCCGGGGTTGCGGCCACCTGCGCTCGCGCCGCTCGACGGCAGAGCTTGACGACGAATCTTCGCGTAACCATACTCGCGACTTGCTTCACATCCTGAACATCGAAATCGATGTTTGTTCTTTTACAACACGATGTTAGGTGGTAGA # Right flank : CCACATGCACATCCCGCCCCCCCCCACCGCCCTCACCCCCTCACCGCATCCACCGCCCGCCGCGCAACCCACGCATCAAAATCCCCCCGCCGCCAATCAAGCTCCAGCGCAAGCCGCCGCGTGCCCTCGCGAATCTTCGGCTTATGCAGCGTCAGCGTGAGCGCATCGAGCGCGGGCCATGCGTCGAACGACAACGCCGCAATCTCCACCGCCAGCGTCTCGAGCAGCCGCGTATGCGGCTTCTCATGCAGATACGCGGTGACCCGATTGCACCACGCTTCGTAATCGATGAGACCATCGCTGTCTTCATGCGGCGTGCCACGATACCGCAGGCTCGCATCGATCGACACAGCCTGCGGCGCGCGATGCTCATGCTCGTGCAGGCCAATGCGCGTCATCACGACGAGTTCATCCACGACGACGCGCCAGCCCTGCCCGCCGGCATTCAAAGGCTCGAAGGGCTTCACGACAACAGCGGCTCGGCGGCATCGAGCATGATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCTCCGCATGCGCGGAGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //