Array 1 351955-358721 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMEC01000003.1 Marivirga lumbricoides strain CGMCC 1.10832 sequence03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================= ================== 351955 30 100.0 36 .............................. GAAGGAGCAAATAGGAAAAAAGCAATAGTTAATTTT 352021 30 100.0 36 .............................. TTTCAACAGGCTGGTAAGAAAGTATTTTAGCGCGCT 352087 30 100.0 36 .............................. ATGATTTTATTCTTATTATCAATCAAGAATACACGA 352153 30 100.0 35 .............................. TAGTATTTTTCAACATCTAACGAGTCAAATTCCTG 352218 30 100.0 36 .............................. TTTACTTTAATTAAGTAATCATCACAGAAATCAAAC 352284 30 100.0 36 .............................. CCGCAAAAATCGGTGTGCATATTATCGCTGCTGTTA 352350 30 100.0 36 .............................. ACTGAAACTCATTTGAGTTGATGCAGTAGAATTTGT 352416 30 100.0 35 .............................. ATACTGGAATTTGTAACAATCGAAGCCGATGGAAA 352481 30 100.0 36 .............................. GTATTATCAGTATTTACTATATCACAAAATATCTTT 352547 30 100.0 36 .............................. CTCAAACAAATGAGCCGTCAAGCGACACTCAATTAT 352613 30 100.0 36 .............................. TTCTTTTTTGCATCTGAGATGTTGAAGGTAATGATT 352679 30 100.0 36 .............................. ATATTTAAAGTCTCAGTTACCTTTAAACAAAGTAAA 352745 30 100.0 35 .............................. AAGAACAAGAAAGAGAAACCTTATTCTTGATCATA 352810 30 100.0 36 .............................. TAGTGAGATTAAATAACTTATCACTGTATTTATCGG 352876 30 100.0 36 .............................. AAAGCTGAAAACGCTGAAGTGGTTTCTCCTAAATAT 352942 30 100.0 36 .............................. ATAAAAAAATGAACTGGCACGAAAGATTAAAAGCAT 353008 30 100.0 35 .............................. TCAGCTTTAAAATTCATAAAATCTAAAACATAATA 353073 30 100.0 35 .............................. TTTGTTTTTATAGAGGCCACAGCAACAATATCGAA 353138 30 100.0 36 .............................. TCATTGACTAAATTGATAGATTCATCAAAAGATATT 353204 30 100.0 36 .............................. CATGGAATGACTATAGGAATGCAATGGAGATGTGGG 353270 30 100.0 36 .............................. ATTCTTCATTAAGCTGTGAATTCAGCTCTTTCAATT 353336 30 100.0 36 .............................. GGTTGTGGGTGGTGTGCTTTAATGTTAAGTATGCTC 353402 30 100.0 36 .............................. TTCATTATAGTCTCTCATTTTATGTTTAGTTTCGAT 353468 30 100.0 36 .............................. GCGTTAGTGTATCTTCCTTTACATAAAATATATCTA 353534 30 100.0 36 .............................. CTATCATTTTTAATTTCTTGAAGGTCGGGATAAGTT 353600 30 100.0 36 .............................. GTTTAAGCAAATCAGCAAAAAAGTTATCATACTCTA 353666 30 100.0 36 .............................. CGTGCTTTTGCTACCGGTGGAGCAACTGCAAGTACT 353732 30 100.0 35 .............................. TTTATTTGAAACCTATTTTGGTGCATAAATTTATT 353797 30 100.0 35 .............................. TATTTCATTTATTAAGTATTTGACTGCCGTCTACA 353862 30 100.0 36 .............................. CTTAAATCGTTGCCCGGTCCGTGTAATTCTGTTTCA 353928 30 100.0 36 .............................. GTTGATCAGTTTTACTATTAATGGCAATTACTTTCT 353994 30 100.0 36 .............................. AAAAGGGTGAGGTAGAGCGCAGAATAAACGAAAACA 354060 30 100.0 36 .............................. ACGTGATTCCCTCATAGCAAAGTACGAAGCTATTTA 354126 30 100.0 35 .............................. TTGAAATTACTGAGCAATCAAAACCAACAAATGTT 354191 30 100.0 37 .............................. TAAACGCAATACTAGCCTTAAGAAAAAGAATTAAGGT 354258 30 100.0 36 .............................. TGGTAGAATATGAAGGAGATTCCGACAGCCTGCGCA 354324 30 100.0 35 .............................. TTGTTATTTTGTTTTAAGTTGATAATTCAGTTCTT 354389 30 100.0 35 .............................. GATGTATGCCGAAATTGCCAATAGCCTTAAAAAAG 354454 30 100.0 36 .............................. AATTCTTTTGTTCTGAAAGTAAATTATCTGGAATCT 354520 30 100.0 36 .............................. TTACATAGGCGTGGATGTTGATTTGCGTTGGGAAGG 354586 30 100.0 35 .............................. GTGCCTCAATAGCCGTTTTGTAGGTCTCAGTCTGT 354651 30 100.0 36 .............................. TAGTTTTTAATAGTTTCCTACACTATTCCTACACTA 354717 30 100.0 37 .............................. GATACTACCGTATCTTCTAGAACCTTTTCAGTATGTG 354784 30 100.0 35 .............................. GGAGATCAATTTAAAGGTAAGACAGAAACAATGAT 354849 30 100.0 36 .............................. TGAATTTCTCTTTGTAGTAATTGAGAAATACTTAAC 354915 30 100.0 36 .............................. CTTGATCTTACTGATATAGATGATAATAGGCGATTG 354981 30 100.0 35 .............................. GATACTACCGTATCTTCTAGAACCTTTTCAGTATG 355046 30 100.0 36 .............................. ATCGATTCCGGCTGATGCTGGATAGCGCATTGCTTA 355112 30 100.0 36 .............................. CACTCAAAAAAAATTTCTATCTATTAGTAAAAGTTA 355178 30 100.0 36 .............................. GGGCTTTTTTTATGGGTTTTCGTCTGAAAATGTATG 355244 30 100.0 38 .............................. TACTGACCGCTAAGCGTGTTGCCTCCCTGGCTATTCAA 355312 30 100.0 36 .............................. TTGTATAAGGGTATTGGAAGAGACATATTTGAAAAT 355378 30 100.0 36 .............................. GCGTTTGCGTAATAACTCTAGATCCTGTTGAACCTT 355444 30 100.0 36 .............................. GAGGAAAGGATGGGACAACAGCTCCTATGATGCCAA 355510 30 96.7 36 ..................G........... AAAGCTCGAGAAATTAACAATGAACCTTCTATGACT 355576 30 100.0 35 .............................. CCTTGTGAAAGTCCCTGGCCGACGGCCAACATTGC 355641 30 100.0 36 .............................. TTGGATATTACAGATATTGACGATTTACGTCAAGAC 355707 30 100.0 36 .............................. GGGCTTTTTTTATAGATTTAATGATAGAAAATGATT 355773 30 100.0 37 .............................. GCGTAGGATTGTATGATTATAAATTAAATATATTATT 355840 30 100.0 36 .............................. TCAGTTATTACTCCGCCAATTGAAACCAGCAATGTA 355906 30 93.3 108 ................A...........T. CTCACCCATTCAAAAAAACAAACACTCTGGGTGAGAATCGCGAGGGGTTTTGTGCGGCATGATATTGCGGGTATGAGCAAATATTTATAGAGGGTACTTATATTTTAA 356044 30 86.7 36 GGA.A......................... GAATGTATAATAAAACCCTTGAAATGCAAACTAAAA 356110 30 100.0 37 .............................. AAATCAAATGAAGCCGAGGAGGTATTAAATGCAGTAA 356177 30 100.0 35 .............................. TTTTCAAAATGATGGCCTTTTTCAAGCGAATCAAG 356242 30 100.0 37 .............................. GGTGTACGCTTCTTTTCACTTCCGGATCTCCACCGTA 356309 30 100.0 36 .............................. TGAACATGAACTCGAAATCAGAAAAAGAAATGACAT 356375 30 100.0 37 .............................. TAAGCTCAGGCACATGGAAAGTAATCAGGCAGGAATT 356442 30 100.0 35 .............................. GTGTTGGATGAAAACAGATGGTTTATAGCCATTGC 356507 30 100.0 35 .............................. CTATAAACATTTGTTGGTTTTGATTGCTCAGTGAT 356572 30 100.0 36 .............................. CAGAAAAGTTAATGCAAGGCTAAAAGCTGTAAAATC 356638 30 100.0 35 .............................. TTAATTCTGCCAGATCGTCCGCAATACGGCTGTGG 356703 30 100.0 35 .............................. ATGAATTGGCTATGCGTTGAATGCAACCTAATTGA 356768 30 100.0 35 .............................. GTGTGAGGTTCAATAGCTTTTGTACACTGATATTT 356833 30 100.0 37 .............................. GAGATTGATCAATCACCAAATCATTGCATTGCTTGTA 356900 30 100.0 36 .............................. GGGGCAGGACTTTTATAAAACAATGCATTATTTTTA 356966 30 100.0 36 .............................. ACGTGATTCCCTAATAGCAAAGTACGAAGCTATTTA 357032 30 100.0 36 .............................. GTTGCTAAGAAGAGGTTACGGAGCGGTAAACGACTT 357098 30 100.0 36 .............................. GTTGCTAAGAAGAGGTTACGGAGCGGTAAACGACTT 357164 30 100.0 36 .............................. CGTGCTTTTGCTACCGGTGGAGCAACTGCAAGTACT 357230 30 100.0 36 .............................. CTGAGGATGGAAAAGGCTCGAAGGCTTCTTTCTTCC 357296 30 100.0 35 .............................. TGAGAAGTTTTTTTCAATCTCTTCTTAGTATTACA 357361 30 100.0 36 .............................. TCGTTTTAATGTGGTTTATTTGCTGTTATCTAGCAA 357427 30 100.0 36 .............................. GCAGGAGCAAGTGATACATCAACAGTTCAGGTCAAT 357493 30 100.0 34 .............................. ATTAGTGCCTCAAAATGTTCTGTTAATGATTTTT 357557 30 100.0 37 .............................. GGTACTAACCCGGGTGATGAAGTTAAAATTATAGCTG 357624 30 100.0 37 .............................. TGCTAAAAAGCTGTTGTATATGAGATATGACCACACA 357691 30 100.0 36 .............................. GTACAAGATGGTGATGAGAAAGAACAATATAATAAG 357757 30 100.0 37 .............................. TTACCTACTCCCCATGCCGTAAAATCTGCATAATAAA 357824 30 100.0 36 .............................. TTTGCTTTCAACTACAGCATAAACCCTTGCACCGTT 357890 30 100.0 36 .............................. TTTTACTGCGCATTTCAGGCAAAGAGTTTGGCGACT 357956 30 100.0 36 .............................. AAACACATGGGGGGCAGACTTACTTCAAAGTCAAAA 358022 30 100.0 35 .............................. ACCACTAAAGACAGGTTAGGTATTCCGGCTGGGGA 358087 30 100.0 37 .............................. CTAGAAACTTAAGTTATGGATTTTCGAAACTACAAAC 358154 30 100.0 34 .............................. AAAATATTTTCAAGGTAAGGTATAAAGGCCGGAA 358218 30 100.0 36 .............................. GATAAGCCAGAACCTTATTATTATACAGTTCATGCA 358284 30 93.3 108 ................A...........T. CTCACCCATTCAAAAAAACAAACACTCTGGGTGAGAATCGCGAGGGGTTTTGTGCGGCATGATATTGCGGGTATGAGCAAATATTTATAGAGGGTACTTATATTTTAA 358422 30 86.7 35 GGA.A......................... ACAGGTATTGCTATTACACCGGACATTACCCTAAG 358487 30 96.7 109 ............................T. CTCCCCCATTCAAAAAAAGCGAACACTCTGGGTGAGAATCGCGAGAGGTTTTGTGCGGCATGGTATTGCGGGTATGAGCAAATATTTATGGAGAGTACTTATATTTTAA 358626 30 86.7 36 GGA.A......................... TCTTTTTTGTTCAACTATTGCAACCGCTGTAGCTAA 358692 30 93.3 0 ................AT............ | ========== ====== ====== ====== ============================== ============================================================================================================= ================== 100 30 99.3 38 CTCTTAATCGCACCATGCTGGAATTGAAAT # Left flank : ATTTATTTATTCAATAATTCAACATGTATGTAATTTTAGTATACGATATGGGAGAAAAGCGTGTAGTGAAAATGTTAAAACTATGCCGGCAGTATTTGAACTGGATTCAGAATTCCGTTTTTGAGGGCGAAATAACAGAAGTAAAATTGAAGGAACTCTTAAGCCAGGCTAAAATGTTTATGCGTCCTGAAACGGATAGCGTTATTATATTTAAAAGCAGGGAAGAGCGCTGGTTAGAAAAAGAGATTATTGGAAATGAGAAAAACGACCTTGATACCTTCCTATAGCTATTTAGGTCGTCAAAGATTAAAAACATCCTGATCTCATCTGAACGGATTTGCTGTAACAATTAGAAAAACCTTATTCTTTTAACAAAAAAGGAGGTTGTCGAACCTCCGGTAAAAATCGTTTATTGCAGGTTGACGATCTGCGGAAGAAAAAGTCATTAAAAAAGATCTGATCTATTGGAAAAAAGCCTATTTTTGAACTGAAGCTAACGG # Right flank : TCTCACCCATTCAAAACAATAAACACTTTGGGTGAGAATCGCGAGGGGGTTTGTGTGGCATGGTATTGCGGGTATGAGCAAATATTTATAGAGAACACTTATATTTGAAGTGAAACTGACAAGGAGCCAAAACCTTGTATGGTTATATGTAAACAAAACATCATGAGCAACTTTTACCCAGGTCCTTCACAGCTTTATCCGGAAATAGGAGCTTATTTACAGGAAGCTTTTGCGTCCGGGATCCTTGAAATGAACCACAGGTCCGAGGCCTTTATGAAACTGGATGCTGAAACTAAAGAGCTTTTACACAACAGGCTTAATATTCCGGCTAACTACCAAATAGTTTTTACTTCTTCCGCTACCGAATGCTGGGAAATCATCTCTCAATCTTTTATTGAAAAAAGTAGTCTTCATTTCTATAATGGTGCTTTTGGCGAGAAATGGTTTCAGTATGCGAAAAAAATCCATTCTGAAACACAAGGCCTTCAATTTTCTGAGGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTAATCGCACCATGCTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.00,-1.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //