Array 1 176-1228 **** Predicted by CRISPRDetect 2.4 *** >NZ_QETG01000002.1 Acinetobacter sp. AM CONTIG_2_length_212335_cov_34.8188, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 176 28 100.0 32 ............................ TGAATTATTCACCAAAGCCGGATTTTCATTTA 236 28 100.0 33 ............................ CAATTGCGCGCGCAGGGTGGCGCTATGGTGGAT 297 28 100.0 33 ............................ ATCAAAGCCGATCAAGTTAAATATTTGTCTATC 358 28 100.0 32 ............................ GCGTTGTTACGCCTGTCGATGCTTCAGGAAAA 418 28 100.0 32 ............................ TTAACAGCCACACCCCATAAAATTTGATCTTC 478 28 100.0 32 ............................ GATATATAGTTTATCGCCTGTTTTTTCTTTAT 538 28 100.0 33 ............................ TGAATATATCGTTACGATTGAAGCAGATTCTGC 599 28 92.9 32 .............T...T.......... ACACCGTCACCATTAACCGGAAGTAACTGTTT 659 28 96.4 32 .............T.............. CACATACAATAAATTATTTTCTTTATCAAAAC 719 28 92.9 33 ........T....T.............. GAATATTGCGCAACAAGCGACTGACAACCTATT 780 28 96.4 33 .............T.............. TTTAAGGCTGCTGATACTTGATTGTGATTGGCA 841 28 96.4 32 ...........................T CGAACCTTGATTGGATTAAATCACCAAATAAA 901 28 96.4 32 ...........................T TACTTTACTCAAAGTTAATTGAGTGGGTTTTA 961 28 96.4 32 ...........................T AAATTCATTACTCATTAGGTCACCATGGACAA 1021 28 96.4 32 ...........................T AATTCACAATGACATTCGATTGTGTGTCGTCT 1081 28 100.0 32 ............................ AAATGAGGCAAAAAAGGCTGAGCGCCAGAAGA 1141 28 100.0 32 ............................ ATTTGCCTGATCCATTTCACCGATCAATATCT 1201 28 89.3 0 ..C.........A..A............ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 97.4 32 GTTCACTGCCATGCAGGCAGCTTAGAAA # Left flank : AGTTGAAAATGCCTTTGCGAGGTTAAAACATTTTCGAGCGATTGCAACCCGATTTGATAAGCTGGCACGAAATTATCAGTCTATGATTTACATTGCTTGTATGTTCATTTGGTGTAAAGCCAAATAAGGACACGCCCTAGAAAACACGTTAATAATAGGTTTGTTTTCGCCCTCGG # Right flank : ATGACTAAATGAATACACGCTATGCCAAGCTCAAGTAAAACTATAAGAATTCAAAAAAGGAAGCTGGATACGATTTCAGCAAACTATGCATATGATTTAAATTAATAATTCTATCGGAGATGTGCTTTGCTATAATCCCGAGGCTTTTTAATATATGACAATTTTATGAAATTTAAAATTTTATTTGCTTCGACTTTATTGTTAGGTTCAACTCAATTTTTAGCAGCAATGCCTGTTGATCAACTATTAGGCTCATGGAAGGTAATTGATGATAAATCAGGAAATTACATTACAGAAATTGCAATTCGTAAGAATTCTAAGACTCAACAATATAGTGCAGCTATCACTAAGTCGTATGCATTACCGGGTACAGTAGCGGCAGATGTCTGTACGAAGTGTACAGGGGCATTAAAAAATAAATATTTGTTTGGTTTAGAAATCCTCACGAATATGCAGGCAACATCAAAAAATAAGTTTAATAATGGGGTATGGGTTAACCC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCATGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 55330-58721 **** Predicted by CRISPRDetect 2.4 *** >NZ_QETG01000025.1 Acinetobacter sp. AM CONTIG_25_length_58823_cov_30.6202, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 55330 28 100.0 32 ............................ CGCCCAATGAGTGAAAGGCGGGTGTTAAACCA 55390 28 100.0 32 ............................ CATTTACTTCTGGCAAGCTGACCTATTTTGAA 55450 28 100.0 32 ............................ TTTATCTTGAGCAGTCTTTCTTAGCATCTGCA 55510 28 100.0 32 ............................ CAGGGAAAGTCACAAGCTTTAATTCTTTAACT 55570 28 100.0 32 ............................ AGCAGCATTTTGAGCAGCGTTACCAGCAAGTT 55630 28 100.0 32 ............................ TTTTCTCTTTTAGCCTTGGCTCTTAATCTATT 55690 28 100.0 32 ............................ TGTCGATGGGAAAGGTTGGAAGTCTTATTTTC 55750 28 100.0 32 ............................ GTAACAATGTGGATAATTAGAAATATTTAAAC 55810 28 100.0 32 ............................ TGTGACAATACCCACGTTTTGACCATTAATGT 55870 28 100.0 32 ............................ TTTCGGTAATACAAATGTAGTCGATTCACCTA 55930 28 100.0 32 ............................ AACAAGCGCAACAGCTAAATATGCAGGCGCGT 55990 28 100.0 32 ............................ TTCTTTAGTTTTACCGACAACAAAAGCAACGT 56050 28 100.0 32 ............................ TAACATCCATTCACCGTTTCTGAACTCCATTC 56110 28 100.0 32 ............................ TGCCAGAACTACGCGACATGGTTGTTTTGAAG 56170 28 100.0 32 ............................ GCACAATGTGAAAAGCGTAACTTTTTTAATAA 56230 28 100.0 32 ............................ GCATTAAAAAAGAAAAACCCCAGCCTATAACT 56290 28 100.0 32 ............................ AGTGAATAGGCCAGCACTGTCTGGCTTATTTT 56350 28 100.0 32 ............................ TTGATCGAGTTGATAAATTTAATCAATAGCTC 56410 28 100.0 32 ............................ TATATAATTATAATTGCAAGTCCTTTTGCAAC 56470 28 100.0 32 ............................ CAAAGCATTCATAAATGGAAGTAGGGTAGTAT 56530 28 100.0 32 ............................ GCCCTGAAAGACGAGGTTTTACGGCTATATGG 56590 28 100.0 32 ............................ CATTAGTAAATGAATCTCAGAGGCTCTAAAAA 56650 28 100.0 32 ............................ TAGCTCTGTCACTGGTAGATATTGGCTAGATG 56710 28 100.0 32 ............................ TGTTGAATTTGAGTACGCAGACGTTGAATCTT 56770 28 100.0 32 ............................ TTAAGAGAAGTTGTAGAGTTCCTAGAATTAGG 56830 28 100.0 32 ............................ GTTCCAGAAGCTAGTAACGTGAGCAACACTAA 56890 28 100.0 33 ............................ AGTTTGCGTTGTTGTATTCCAATCACCTTTTGC 56951 28 100.0 32 ............................ ACTCAAACCCTTTATCTGTTAACCTAGCCATT 57011 28 100.0 32 ............................ TGAGCATGTTATTCCTGTGATTGAGTTTGTTA 57071 28 100.0 32 ............................ TTCAGCTTGATCTGGATCAAAAGAGGTGTACA 57131 28 100.0 32 ............................ TCATGAGATAGAAAACTGGAAGCAATATGTTC 57191 28 100.0 32 ............................ TGCCAATTCCAATTTGCGGTGTTACCAACTAC 57251 28 100.0 32 ............................ TTTGCGCCCCAGCCCCTGTAATTACAACAATT 57311 28 100.0 32 ............................ TAGTGGAGCAATGTAATGTATGACTTCGATTG 57371 28 100.0 32 ............................ ATAATCTATTAATCCATTGAGATGATCTGGAT 57431 28 100.0 32 ............................ TGATACATAAACCAAGCTCCATTCACAAACTC 57491 28 100.0 32 ............................ ATGGATGGATTCAATTTAATATTGAAGTGCAT 57551 28 100.0 33 ............................ TGCATATAAATTCTTTTCTGTCAACCCCTGCAT 57612 28 100.0 32 ............................ CTGCGGCTATGTACCATTTATACTTAATAATA 57672 28 100.0 32 ............................ GTCTAGCAAATATAAAGATACGCAGCCGAGTA 57732 28 100.0 32 ............................ TTCTGGAAATTTACCCTGCGCGCGTACATAAT 57792 28 96.4 32 ...............A............ TAAAACTGTATCTAATGCGAAATAAGCAGCAT 57852 28 100.0 32 ............................ AAATCCAGTAACAGGAGAAATAGCAGTATTTA 57912 28 100.0 32 ............................ TGAGAAAAATTATAAGGACGGTAATTCACATT 57972 28 100.0 32 ............................ TTCAAGAACAGGTGGACAATCCCCTAGTGGAA 58032 28 100.0 32 ............................ TAATAAATCATGTGGTTGCGATCCTCGCGCTA 58092 28 100.0 32 ............................ CACTTCACTATAAATACCACCACTAACACTAG 58152 28 96.4 32 .............C.............. ATCGTCCGCAGCAAAAGAATCTACGGAAAAAA 58212 28 96.4 32 .............C.............. AAAAGTCTTTGCTGTGGCGGTACGCGCACCCA 58272 28 96.4 32 .............C.............. ACTATGAGAACTTCCTTTTACCCCTGCATTTT 58332 28 96.4 33 .............C.............. TGTGGGCTTTGTTTCTGTAAAACCGCTTACACT 58393 28 96.4 33 .............C.............. CAAAAGCCGATATGTGTCCTTATCCTTGAACAT 58454 28 96.4 32 .............C.............. TGACTCTGGACACACAATAAACATTGCGTCGT 58514 28 96.4 32 .............C.............. TGCGACAAGTAGCTGCGCACCTGCTGCCCAAC 58574 28 96.4 32 .............C.............. GTCTGCGCATGTTACTTGCTGACATGTATTGC 58634 28 96.4 32 .............C.............. TGCGAATATTCAGAAATACGATTGGATATTCC 58694 28 85.7 0 .............C...........GGC | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.1 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GCTGATTTGAAAGAACTTGATCTTAAAAAATGGTTAGATCGATTAACTGATTATGTTCATATCACTTCTATTCGAGAAGTCCCAGAGAATATAAAAGGTTATGCCATTTATAAACGTAAACAGGTAAAAACCAATGCCGAACGTTTGGCGCGCCATCGCGTAAAACGCGGTGATATTGGTTTTGATGAAGCTTTGGCTCGTTATAGCAATGTTGTTACAACAACGGATCTGCCATTTGTCCAAATGAAAAGTTTAACTTCAGATCAAATGTTTAAACTTTTTATAGAAAAGAAAAATGCTGAACAATCTGAAAGTCAGGTTTTTAGTACCTATGGTTTAAGTTCACAGAGTTCTGTACCTGAATTTTAACCCAATATTTTTTCATTCTTTAACAGCTTAATAAAATCAATAGGTTATAAACGTGAGTTAAAACTTGGGTCTTTTATGGATTTTTAGTATTAACTCACTGTTATAACTTTATTTTTTGCTATAAAATTACT # Right flank : GTGTCCTCATTTGAAAAATAGATTTTAAAGACTTAATATAATCTTTCAAATTCCTTATATTTCTATATATTTCAATGGCACGTACCCTTTTAACAGATGATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //