Array 1 23934-20782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSVQ010000011.1 Acinetobacter baumannii strain A4 P_contig000011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 23933 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 23873 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 23813 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 23753 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 23693 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 23633 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 23573 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 23513 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 23453 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 23393 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 23333 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 23273 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 23213 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 23153 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 23093 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 23033 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 22973 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 22913 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 22853 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 22793 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 22733 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 22673 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 22613 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 22553 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 22493 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 22433 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 22373 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 22313 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 22253 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 22193 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 22133 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 22073 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 22013 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 21953 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 21893 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 21833 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 21772 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 21712 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 21652 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 21592 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 21532 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 21472 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 21412 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 21352 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 21291 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 21231 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 21171 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 21111 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 21051 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 20991 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 20931 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 20871 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 20811 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //