Array 1 42709-42934 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIL010000022.1 Clostridium sporogenes strain 10385 NODE_22_length_56558_cov_2.341239, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 42709 30 100.0 36 .............................. AAATTTAATTTCATAGGAAAAGGTGATATAGATGTA 42775 30 100.0 36 .............................. TATGAAACAGGCTGATGCTCAATACCAGCTAATTAA 42841 30 100.0 34 .............................. CTTTTTTAACCTTGCTTAACTTCACCCATACTTG 42905 30 83.3 0 G.......A.....A.G....C........ | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 95.8 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : GCATAGAACTAATTTTGTCATAGGCATAGGTTAATCCAATGGTTAAAAAAAGCTCTGCGGTTATATCGGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGCTCTGTGCTAGTTACTCCATCTCTAAATTCCACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATATGATTAGGTTAAGGAAGTTGTTATTTAGATAGCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAATCGACTTTAAGTTGAAAATTTGTCCAAATCATTGATATATAAGGGTTTAGGTTAGGTTTTTTATGTAAATTTGAAAATACCCTAATCGGTTGGAAAATTTTATTTATAACCTTGTAAAGTCAATGGTTCTATGATATTTTTCAAATTAAGGAATGGCTATTTTACTATG # Right flank : TTTGTACACAATCTGAAATTAAAGCGATGTAACTATTAATATTGAAAATACGAATGATGCTCTTTGAAAACTAAATAATACGGTGTTGTTAAATGATAATCTCATTTTGATTAATCTTAATCAACTAAATTGAAAATTATGATATAATCAATAATAGATAATTAATGATAGTATAATTGTGTGAAGTAAGGATGATTTATATGTTATTGAATAGTAGTAACAAACATATATATAAGTGCACAGGGAGGTATATAAAATGATAGTATTATATATTATTTTATGCTCAATATTAGTGTGCTTTATAGTTGAGTATACTGTTATCTGTAGCCGTTTTAAGATAGCATCTTATAATAAGGGTCAAAAACAAGATGTGATTATCGTACTTGGGTATCACGTAAAAAAGGACGGTGATGTATCACCAATTTTACGTGAACGAATAAATAAAGCAGCAAAGTTATATCATGAAGGAATTGCTCGAGTAATAATATGTTCCGGTGCAG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 44174-44400 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIL010000022.1 Clostridium sporogenes strain 10385 NODE_22_length_56558_cov_2.341239, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 44174 30 100.0 35 .............................. GTATGAATATGTAGCAACACTTGATGATAGAACCA 44239 30 100.0 36 .............................. CTATCTTTTAATCCTTTTATAAAGCCACCATTATTT 44305 30 100.0 36 .............................. TATTAGGAGAACTTTCCATTATTTTTTTAAGTTCTT 44371 30 86.7 0 ...............T.A.......G...A | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 96.7 36 GTTGAACATTAACATAAGATGTATTTAAAC # Left flank : AATCTAAATTTCCGCATGAATACCTAATAATAGGAGTTGGAATGATTTATCTTTATTTATACACGCAGATGTTCATAAACAACTTACGTTATCATAAATATAAACAATAAAGTTAAGTCATCATATTATTTAATGAAATAAATGAAAAAACGAATAATTTTTTAAGCACCGTATTATTCAAAAACTGAATTTTATGGTGTTTTTGCGTCGCAATACAAAGATATTGTAAAGTTAGATATATTTAAGTAGTAAATATAAATCTGAGATTTAGTGTGAGGTGCTTACTCATTTGAGGAAGCGAGAAGGAGTTCTACTGACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTTGAGCGTTGACACATAAGGCTTATGGTAGGTTTTTATTATGAAATTTTAAAAAAACAAAATCACTTGGAAAAATTTTTATAAAACCTTGTAAAATCAATAGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAAACAAATAACGATGAAAGGATAACAAATAATAATTAAGGTAGCTTTTCATTGACAAGGTTTTTCAGCATTTTGAAATTGAAAAATCAATAGCAGATATTATATAGAGAAGGAATCAATTGTAAGCGGTAAAATCTAATTTTATAGTTAGTTTTTTATAGAATTAGATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAATATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTGAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 45305-45469 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIL010000022.1 Clostridium sporogenes strain 10385 NODE_22_length_56558_cov_2.341239, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 45305 33 100.0 33 ................................. ATTATAATATTTGAATATGATTTATTTAAATGC 45371 33 100.0 33 ................................. TCTTCGGACTCTTCTTCTATAATTATCTGTTCT 45437 33 93.9 0 ..............................CA. | ========== ====== ====== ====== ================================= ================================= ================== 3 33 98.0 34 GTTGAACATTAACATGAGATGTATTTAATATCT # Left flank : GATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATATTGAAAACAGAGGGATTAAATGGTAAATCACATTTCCATTTAGAATATTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAGCCAATTTTAACTTATAAGCCTATCTTAGCTTTTGAAATGTAAGGCTTAAGGTAGGTTTCCCATATATATTTATAAAATATCATAATTGGTTGGAAAATTTTCTTTAAAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGTAATGGCTATTTTACTATG # Right flank : TTTTCTAAAGTATTAGCCATATGTTGAATAATAAGAATCATTAAAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATAGAATATGATAGGTAAGTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATCGGTTATATTAACTAAAGGCTATATGGTATAATATAGATAAATTTGTATAAAGAGGTGCATAAATGGAATTTTGTGAACTGATTGCAACAGTGATGTTAAAAAAAGATATATATTTTGAAGATTGTGGATATATAATAGGGAAAAACATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAAGAAATACATCCAAAGAAACAGTACAAAAATTATGTATTTAATAGTTTTTATCCTATAGAAAGAGATAAATTTTATAAAAAAGGCAGGTTGTATATTTTTAATATTAGAGGTTTAAGTAAAGAATTTATAGATAAAATAGAAACTTGTTTATGTAAT # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAATATCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 26548-26257 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIL010000036.1 Clostridium sporogenes strain 10385 NODE_36_length_30049_cov_2.226244, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 26547 30 100.0 34 .............................. CAATACATATAATATCCATTCTCCTTGGAATTAT 26483 30 100.0 36 .............................. GTTGGAATAATGGCATAATTGAGATTACCTTCTTTA 26417 30 100.0 35 .............................. GATAGTTCTTTTAATTTATTATATAAGCCCTTATC 26352 30 100.0 36 .............................. AGATTATACATAGTTTGTTCTTTTTTATGTTGTTCT 26286 30 93.3 0 .......................C....G. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 98.7 36 GTTGAACATTAACATGAGATGTATTTAAAC # Left flank : CCAGTTGAACTTTAACATGAGATGTATTTAAGCAGAGAACCCAAATCTGTGATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGGCACTTAGTATTTTAAGCTTAAGTATGATCTGAAAAAGTTGAACAATAACATGAGATGTATTTAAATCCAAAATTTGATTCTTTCATATCATTTATATTGATAGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACCCAAATCTCTGATTTGGAGTGAGTCGCTTACTCCTTGGAGATAACGAGAAGGAGTTTCATAAATTAAATTTTTCCAGGCATAACAAATTTCAAAACCTATTCTAAACATTGATATATAACGATTAGAATAGGTTTTTATTATGTATTTATGAAAAATAAGAATAGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATAGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTGTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTAAAATATAGTTTTAATTTTGGTTGTGCTTTAAAGTGGTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATAGGGTTTATATAAATTGTAAGATACTAACTATTTAAAAATTTATTTAATGAATCATTATCTTTAAATAAGTTTTCTAAGTTCCCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTGTCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAGTACCACTGCATTCTTTTCTAAAAGTTTGTTAGCTTTTTTGTCACTCCAAAATTTATTATAATTTTCTTCCCCTAAATTTTCATTTGCTTTATAGTTAACAGTTATTTCATAGGGCTCTTT # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 27637-26801 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIL010000036.1 Clostridium sporogenes strain 10385 NODE_36_length_30049_cov_2.226244, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 27636 30 100.0 35 .............................. TCATAACTCATAGCCATTTGAACTGTTTCTCTGTT 27571 30 100.0 36 .............................. AATAAGTAAAGACAATATAGAGCCACATATTAAAGA 27505 30 100.0 36 .............................. TAAAATCCAAAATATAATATTAAATCCATTTTCTTT 27439 30 100.0 37 .............................. CTTTGTTTTTGTACCGGTATTATTGGGAAAACTTTAT 27372 30 100.0 35 .............................. GAATAAATAGGTTCTTGCCCTTTAAAATCTATTAA 27307 30 100.0 34 .............................. GAGTATGATTCTTCACTAATGCCAAATGGAATAA 27243 30 100.0 36 .............................. TTATTAACGTAATATAATATTTTATCCATTTTTAAA 27177 30 96.7 36 ........G..................... TTTCTATTTTCTTTAAAAAATTGCCTATCTACATTT 27111 30 93.3 37 ........G.......A............. ATAGATAAACAACTCTGAAGATATGCTTTGCTTACCA 27044 30 80.0 118 .......TT......GA...........GC AGAGAACCCAAATCTGTGATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGGCACTTAGTATTTTAAGCTTAAGTATGATCTGAAAAA 26896 30 93.3 36 ...............GA............. CCAAAATTTGATTCTTTCATATCATTTATATTGATA 26830 30 86.7 0 ...............GA...........GC | ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 12 30 95.8 43 GTTGAACAATAACATAGGATGTATTTAAAT # Left flank : GAAGGATTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTCAAAAAGATTTGTATAATGAAGTTAGATTTGATATTCCAAATGCAAGGCTGATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAAACCTTTGCAAAAAACTAGAATGGGTTAATATCCATATCTAGTTTTTTGTTTTTTACTGAAATTCTATAAGTATATGAGTGTTTGTTATGTACTACTTGTGTATATTTAAAGTTTTCCAAGTGAATTCAAATTCAAAGCCTATTCTAAGCACTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTTTTAAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAACGGGTATATGATATTCTTGTAAATAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACCCAAATCTCTGATTTGGAGTGAGTCGCTTACTCCTTGGAGATAACGAGAAGGAGTTTCATAAATTAAATTTTTCCAGGCATAACAAATTTCAAAACCTATTCTAAACATTGATATATAACGATTAGAATAGGTTTTTATTATGTATTTATGAAAAATAAGAATAGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATAGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAACCAATACATATAATATCCATTCTCCTTGGAATTATGTTGAACATTAACATGAGATGTATTTAAACGTTGGAATAATGGCATAATTGAGATTACCTTCTTTAGTTGAACATTAACATGAGATGTATTTAAACGATAGTTCTTTTAATTTATTATATAAGCCCTTATCGTTGAACATTAACATGAGATGTATTTAAACAGATTATACATAGTTTGTTCTT # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.69, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //