Array 1 116018-115256 **** Predicted by CRISPRDetect 2.4 *** >NZ_WENC01000004.1 Pediococcus acidilactici strain FAM19466 FAM19466_scf0004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 116017 36 100.0 30 .................................... GGAGTTTATTTCACGTTCATATTGGAATCA 115951 36 100.0 30 .................................... TAATCTTGCACGAAAATCGGTAGGTACTCA 115885 36 97.2 30 .............A...................... TAATCACTTTCAGTGTTATCTAATTCCAGC 115819 36 100.0 30 .................................... TAATAAATACATTATAGTTTGTAATGTAAT 115753 36 100.0 30 .................................... AATCCAATTAATACACTGGCTCCTTGCGTT 115687 36 100.0 30 .................................... AACGCAGGCAAGAAAGTAGAAGAAGCAGTG 115621 36 100.0 30 .................................... CGTTCAGTATTCTGTTCTCCAACCATTTCT 115555 36 100.0 30 .................................... CAATTCGGTTTAAAAATGAACTCAAGATTA 115489 36 100.0 30 .................................... CATTTTGCGAACAGCGGATTATTAATGTAA 115423 36 100.0 30 .................................... CTGAAAAATGGTTGTTAAATCCAGATAATT 115357 36 97.2 30 ..........T......................... TTGCAAAGAGACAAAAAGCCTACAACCATG 115291 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.1 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAATGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAATTTTCAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATAATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCACTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //