Array 1 454376-454690 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYM02000017.1 Vibrio breoganii ZF-29 ZF-29_contig_140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 454376 37 100.0 33 ..................................... CTACCATACCCGTCAAGGTTTCGGCCCTCACCC 454446 37 100.0 32 ..................................... CTGACTAAAAAAGTTAACCCCAGAACCGTTAG 454515 37 100.0 32 ..................................... ACTAGATGGCTTGCAATGAATGCCGCCATCAT 454584 37 97.3 33 G.................................... GCCCCCAACAACCAACAACCTACGAAGAAAAAT 454654 37 94.6 0 A...................................T | ========== ====== ====== ====== ===================================== ================================= ================== 5 37 98.4 33 TGTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Left flank : GGGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGAAAAAAATGCATCGCCTCGCTTGTGAATACGGAGTGCCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCGCAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATCAAACATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAACAACCAAGGCACCATTATATTCAATGTGGTATCAAGAGCAGGTTAATTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGGGGCTTGC # Right flank : TTTTATGACCCTAGGCACTAGAACCTAGAACCTAGAACCTAGGTTCCCCCCTTCTCAATCAAAGAATAAACCCATTAAGATAAGGCAATGCACTCCCTATCGTTATGCCAAAGACCAAGCCCCATATCACGCGAGTATTCTTCTCACCGTACATGTGTTGAATTTGGCTTTGAACTGCCTTGAGTTGGTGGTGGTGTTCGCACTTTTGCTGTTGCATCTCCTCTATCAGCCTGTCGCGTGCTTTTAGCTCATATCGCAACGCCGAAATAGAACTGCTACAGCGACACTCTTTGGTGTACTGCTTTATGATTTGGAGTTGCGCATAACTTTCACAACCCTTGCCTGCTAGTACCTTATCTTGGGCAATCTTAGTCAACTTAAACAATTCATCGCTAGGCATTGAACCTTTATCCGGATGAAGCCTATTTGCCAAAAGCCTGTAGCTTCTTTTTATCTCCAGTTTTGTTGACGCATCGCTTGTGCCTAGAATTTGATGAAAA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 456723-457103 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYM02000017.1 Vibrio breoganii ZF-29 ZF-29_contig_140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 456723 37 100.0 31 ..................................... GTTGGCAGCAAGCCAACGCTGAAGCCTTTGT 456791 37 100.0 32 ..................................... GTCTGCTCTCGAGCAAGACCTGACCATCAACA 456860 37 100.0 33 ..................................... TTCATCAGTTTCCACTGTCACTTCTTTCATTAA 456930 37 100.0 32 ..................................... AGATCTCTACCCCAACCCACAAACGACATTGC 456999 37 97.3 31 ....................................C CAGACGTCTGCGAGGTCTGACCGTCCGTTTG 457067 37 94.6 0 ................................T...C | ========== ====== ====== ====== ===================================== ================================= ================== 6 37 98.6 32 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Left flank : TTGAACTAGGACGACTCGATTTATACGACCAAACTATTAGTTCAGAGAAAGCTGTGGAGCTTTATTTGATGATGTTTAAGGCGCTCTTGATTCTCTTTGGGTTTTACTTATTTTCAATATGCCTTGAACGTTTGGCGATTCGCTATGCCCTCTATAAATACAATCAAGTGAGGCAGGAAAATGAAAATCTCACCAATTAAACCTATCCCTAATCTGTCCGATATTGATGTGACCGTGACCACAGCTGGGCTTATTTTAACCTAAGGAATAAGCCCCCAAGGCACCAAAATATTCAATGTGATAATCAAGTTTCGGCAAGGTTCACAAATTCAGTGAACTACAGCTCAAAAAGCATTTAAAACAGTAGCTTAAAGCAGGATTATTGAGTTAAGATACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGTGGATTGCT # Right flank : CAATCACCTTTAATACCCACAACAAGCGAACGTCTGAAATTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAAGTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGTCTGAATGGGTTTCTTTAGTTCTTTAATCTTAATGTTGTTTACTTCCTGGATTTTATAGTGCCCACCAAACCTACTACCTAACTCACCTTCGATAGCGCCATTCACTTCAGAGAGTAACCTTACCCACAGACTGTACTGCTTCTTATGGACCACCGACTGGCTTGTTAAACCGTCAATATCGAAAAGGTCTTGTGCCCCTTTTCTTTGAAATAGGAATATATCACCTTGATACCGCTCGTCGATTAAATCCAGCAAATGATCCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //