Array 1 911-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDYM01000012.1 Sporosarcina sp. P13 contig-150_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 910 36 100.0 30 .................................... TACGATTACGTTTAAGTTTGAAGGCAACGT 844 36 100.0 30 .................................... GCGCCGGCATAGTCGCCCTCGAGGTTTACG 778 36 100.0 30 .................................... CATCGCTCGTAGCGTCCATTAAGGCGTATC 712 36 100.0 29 .................................... AAGCATGCTCGACCTGTGTTACCGGCTGT 647 36 100.0 29 .................................... AGTTCTAGCGTTTGCGGATAACATTCGCG 582 36 100.0 30 .................................... TTGCGCGTCAATGTCCGCAGTGAAACGTTT 516 36 100.0 30 .................................... TAATACCATCTAACATATAAAGCGTACTAA 450 36 100.0 30 .................................... GATGACACGTTGACGACGCTGGGCGGGACG 384 36 100.0 30 .................................... TTACGAGGGGCTGATTATATGACGAAACCA 318 36 100.0 30 .................................... CACGACCCAACTACATGAGTAGCTTATGCG 252 36 100.0 30 .................................... AGAAGCCGCAACTCACACCGCAACAACAGG 186 36 100.0 30 .................................... CTGACAGAGAAAAGAATTCGTTCGTTGGAG 120 36 100.0 30 .................................... TTATTGACGCGAAACGGATTGAATTAGACG 54 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTCGGTACTCTTTCAGTTTTCGGTATAGGAAAAC # Left flank : ATTCAGAAAGAAGCGATGAATAAACAAACGCTAATTTTAATTGAATTACCGGAAGTATATTCTACAAAAATGCAACTAGAAATATTAATGAATGAAATAAATGCCATGCGGCTAAAAGGAATTCATTTTATAATCATTACTAATGAACTTTCACTTAGCGCAAGAAAAAACTTCATCGTCAGTAATGAAGTTTTCAATGAAAGTGCAATTGAATCGGTGAAACGTGAAGTGTTATTAGATATCCCAAGCGGAGCGGAAGGGCAAGATTTTATCCAAGCGAAAGAGCAGTTACTAACGATTGTGGATAACTATCCAGAATGTGACTTATTTAAGTTAATTAGCTACAGCGAAGAGCAAACTATTCAGCTCTTGATGTATATGATTTTAAGGAAGCTAAGTATTCATGAAACCATTGATATGATAGGGTTTCCTGAAAATATTGTGAAATTTATGAGCAGCTATTAGTAATCAGAATCCTTTGTGTTATACTGAAGGAGGTA # Right flank : CAGAAGCCGCAACTCACAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGGTACTCTTTCAGTTTTCGGTATAGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [13.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 49231-46559 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDYM01000024.1 Sporosarcina sp. P13 contig-150_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 49230 36 100.0 30 .................................... AATACATGATATAATTGTATTAACAAGTAA 49164 36 100.0 30 .................................... ATTAGGCTTCATGATTCACCACCGCCTTGT 49098 36 100.0 30 .................................... TCTTATCATCTGTTGGCTGTTCAACACGCC 49032 36 100.0 30 .................................... AATGGAGTTGATTTCTCGTCTATCCATCAT 48966 36 100.0 30 .................................... CAATTTATAAAGGTGACGATTTACTAGTAA 48900 36 100.0 30 .................................... TATCAAAGCGGCATCGACATTGAATTATCT 48834 36 100.0 30 .................................... AACAGCAAAAGAAAGAAAAAGAGGTTCTTG 48768 36 100.0 30 .................................... TTACGCGGGTTGCTCTCCCGCTCTCGTCCA 48702 36 100.0 30 .................................... TCACGTTGCTAGGATGGGAAGAACAGACAG 48636 36 100.0 30 .................................... TGAAACAGAAGGTGGACTCAATCTTGATAC 48570 36 100.0 30 .................................... AACGTTGGATAGCCAAGCTGATCAGACACC 48504 36 100.0 30 .................................... TAATAGTTGGTGGTACTTCTTCCACCACTT 48438 36 100.0 30 .................................... TATTCCGTTCAGGTGGAGTACATGGGCAGG 48372 36 100.0 30 .................................... AATTTCGCCCGCGGCTTTCGGCCCCATCTG 48306 36 100.0 30 .................................... GACTCCACTGCTCAACAGTTGGCAGATACT 48240 36 100.0 29 .................................... AGAAGTCGGTTTAATCTATCAAAGCACCA 48175 36 100.0 29 .................................... GCTATTTGTGGATGCGCGAGACATTGACG 48110 36 100.0 30 .................................... TATCAACTGTCAACAATTATCTACTTTATT 48044 36 100.0 30 .................................... ACTAACAAAATCCGACCAAGCATTAGCCGA 47978 36 100.0 29 .................................... GCAAGGTCGAAACCTACGGCGGCAAGCTA 47913 36 100.0 30 .................................... TTGGCGCGTATCAAAGTTAGGTCTAACACG 47847 36 100.0 30 .................................... TTGACTTCGCAAACAAAGATATTTATATCG 47781 36 100.0 29 .................................... TCAAAATAACCGCAAAACTCAAATATCAC 47716 36 100.0 30 .................................... CTGGAGAGGTTTGGTATGTATTTGAGCCGG 47650 36 100.0 31 .................................... ATTGCGGCAGCAACATGATTTGGCAGAATGA 47583 36 100.0 30 .................................... ATACGTGACTGTATTCGCACCAAGTTCGAC 47517 36 100.0 30 .................................... TTGGCAGTCTCGCTATAAAAACCTAGCGGA 47451 36 100.0 29 .................................... TAAACTAAATCACCGTCGCGCAGTTCTCT 47386 36 100.0 30 .................................... ATAACGCTAAATGGTTACTTAATATGTTTA 47320 36 100.0 30 .................................... ACAAGGTGACTAATGGATTCATGAATGAGG 47254 36 100.0 30 .................................... GAAATCGGAGGTCTATCCTTATGAATACGA 47188 36 100.0 30 .................................... CGAAAGCCGCCGCAGCCAAGCGCGCGCACA 47122 36 100.0 30 .................................... TTACGACCTCTGGGTTATTGCTTCCAGCTT 47056 36 100.0 30 .................................... AAACGATGGATGAGATCAACCATTGAGCAA 46990 36 100.0 30 .................................... TACCCCTTACCGTTACGCCCATTATACATA 46924 36 100.0 30 .................................... AGCTTCTCTTTAATTCCGTCAACCATTCCG 46858 36 100.0 30 .................................... CAATGCTTTCCCTGCAACATATCGCGTTGT 46792 36 100.0 30 .................................... TTGAAGTACGTCGGTGAGTACCCCTTAATG 46726 36 97.2 30 ......................T............. CCGGTGTGTGTAAACTGTGACCAGCATCTA 46660 36 97.2 30 ......................T............. TTGGTGTGGTTAACGACCACCGAACACCGT 46594 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 41 36 99.9 30 GTTTCGGTACTCTTTCAGTTTTCGGTATAGGAAAAC # Left flank : AATCGGAGGTCTATCCTTATGAATACG # Right flank : TGAAACGCGCCCCACTGTTTACCTTTTCAGTTTCGGTACTCTTACAGCCGTCAAAAGTAAATATAGGTAGCATAAATTTGTAATGGTCACCACACGATAAATGATTTTAACAATTCATGAATTAACAGGAGTTTTAAAAAATTTAACTTCCAAAATATAACATCGGACCGAATGACTGACGAATTTCAGTTATTCGGTTTTTTTGTTGTTCTTTGGCGCTCATAGAAAGTGGCCCCGCGCTCATGGAAAGTGTACGTGTGCTCATAGGAAGTGGCTCCACGCTCATAGAGGCACAATCGTACCCAAAAAACTATCCACAAATACAGAAAAGTGGATAAGTTTTTAATCACTATGCATAATTTACCGGAATATATTCACACTATCTACAAAGGAGTTGATGAAGTGGAGGATAACTTGCTAACTATCCACAAACTGCGAACATCTTTCCTAATTGATGGTGAATTTCACCGGGCTGTGGATGGAGTTTCGTTGACTATCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGGTACTCTTTCAGTTTTCGGTATAGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //