Array 1 83755-82887 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTUM01000040.1 Pseudomonas aeruginosa strain AZPAE14848 AZPAE14848_contig_40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 83754 28 100.0 32 ............................ ATCACAACCCGCATCGACCGGTTTTTCTTGTC 83694 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 83634 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 83574 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 83514 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 83454 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 83394 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 83334 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 83274 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 83214 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 83154 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 83094 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 83034 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 82974 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 82914 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : AGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTCTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //