Array 1 444234-448501 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXU010000001.1 Deinococcus sp. HMF7604 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================== ================== 444234 29 100.0 32 ............................. CGCCATCCTTCAGGCCGTCTTCGCTGACCTTG 444295 29 100.0 32 ............................. AATGCTGTAGCCGCTGGGTTTCAGCGCGTCGA 444356 29 96.6 32 ............................T CCGGGAACGTGGCCATTGCCGCCATTGCCGTA 444417 29 100.0 32 ............................. TGGCACGGGGACCATCACCATCCGGGACGAGG 444478 29 96.6 32 ............................T TAGCGAGGTGAACGACACCAAAAACAGCGCCG 444539 29 100.0 32 ............................. CTCGTCAGCGATGATGACAGCGCCTCTCTCTG 444600 29 100.0 32 ............................. AAGTGACCGAGGCGCAGGCGACTGAACTGATC 444661 29 96.6 32 ............................T GCACCGTGCCGGCCCGGACCACCTCGTCTGGG 444722 29 100.0 32 ............................. GAGCAGCGCAGTTCGCACGAGGCCTCCCTGAC 444783 29 100.0 32 ............................. ACATCTCTGAGCGAGTGAGTAAAATGAACGGC 444844 29 100.0 32 ............................. CCATGTTGCCACGAAATACCAGAGGACACAGC 444905 29 100.0 32 ............................. TAATGGCGCCTCTGGCGCCTCTGCCCTGGCTC 444966 29 100.0 32 ............................. TTGATAACGGCGCTTATGGACGGCCTGGCCGT 445027 29 100.0 32 ............................. GAGCAGCAGCGAGGGTGCGCGCCAAGTAACGC 445088 29 100.0 32 ............................. CAGCGTTATCGGCTGGGCTTATCACACACAAC 445149 29 100.0 32 ............................. CATCCCACGTCCGATATAACGCCCAGCGCCTT 445210 29 100.0 32 ............................. GTTTGTGGTTGTTTGGTGTGCATAGTCAGTGC 445271 29 100.0 32 ............................. GCAAATTGACCATTACGCGCCCGACTTCAAAT 445332 29 100.0 32 ............................. TATATGGGTACGAAATAGAAATGCCCCCACTG 445393 29 100.0 32 ............................. TGCGCTGGGCAGCTTCCAGTGCCAGGCGCTCG 445454 29 100.0 32 ............................. CGGCCGTGGCCCACCCGCTCCAGGTCCTGAAA 445515 29 100.0 32 ............................. GGCAGAGTTCAAGAGCGGTTCAGGCGCCCGAG 445576 29 100.0 32 ............................. GCGCCACGCGGGGCATCAGCCGTTTCCTCCAG 445637 29 100.0 32 ............................. CCCTTGAACGCCTCTGCTCGCCGCCTTGGACG 445698 29 100.0 32 ............................. GACAAAACTGCATTCCGCAACGTAGACATTAC 445759 29 100.0 32 ............................. CGGCAGCAGAGGCGGCGGCAGACTTTGACCGA 445820 29 100.0 62 ............................. AGCATGAAATGGGATGTACGGGATGTTCCGAAGAGGGCGAGTAGTGGCTCGTCTTCGAGCGC 445911 29 100.0 32 ............................. GTTTTTGCCATGCGGTCTCACTTCCTTTTCTT 445972 29 100.0 32 ............................. GTGCAGCTGGGCCTCTTGGGGGCGGTGCTGAG 446033 29 96.6 32 .......................A..... GGGGCTAGCATGCTGGTAGGAAAGAAAGTGCG 446094 29 96.6 32 ............................T GCGTGTGGTGATATCTGGGCCTGCCCTGTTTG 446155 29 100.0 32 ............................. GTCGCGGCGGCGGCGCTGGAAGGACTGACGGC 446216 29 100.0 32 ............................. TGTTCCTGTTTCCACATCGTAACCAGAATCGT 446277 29 100.0 32 ............................. GAGCGTTATGCCTGAACAGTCTGGCCCCCTCG 446338 29 100.0 32 ............................. CGAAATTCCGACTTAAAGGCGTGTCGTTCGGA 446399 29 100.0 32 ............................. CCGGCCTGGTCTAGCGTCGTGTTCAGTTGCTC 446460 29 100.0 32 ............................. GAGCTGGCTGAGGCGTTCTACGAGGGCAACGA 446521 29 96.6 32 ............................A TTCCTCCATTTCCCATAGTCATGGCCTCCTTA 446582 29 100.0 32 ............................. AATCTGAGCCACGGCAGGTTCCACGTTAGCTA 446643 29 100.0 32 ............................. CCGAACTAGCCGAATTGGCTCAGGCGTGTGCC 446704 29 100.0 32 ............................. CCTGAGCAGCTCCTGAAGGTCATCCCCACCAC 446765 29 100.0 32 ............................. CTGGACACCACAGTGCTGCCACCCAGTGCGGC 446826 29 100.0 32 ............................. ATGTTCCGGGCGCGGCGGCGGGCGCGGGCGAC 446887 29 100.0 32 ............................. TGCCCCCCGTCCGCGTTGAAGAATCCCCCATC 446948 29 96.6 32 ........A.................... ACCATCTGGCGCGTGTTCTAGCTGCTCGTGAA 447009 29 96.6 32 ............................T GCTGCCATCCATGCCGATGACGTAATGGGCGC 447070 29 100.0 32 ............................. ACTGCCTTCGAGGACCGCCCCGTGGTCGAGTA 447131 29 100.0 32 ............................. TTCATCCTGCTGCCCGGCATCGAGCTGACCTA 447192 29 96.6 32 .......................A..... CCAGTAGCTGACAATGAGCAAATTCTATTTTC 447253 29 100.0 32 ............................. CGGCCCGGATTGCTGCTATGGCCGAGGGGCTG 447314 29 100.0 32 ............................. GGGCCAGCAAGCCCCCGGCCCCGGCACAGGGC 447375 29 100.0 32 ............................. GCCGGGTTATCCCCGTGCCCTACAAAATCCGT 447436 29 100.0 32 ............................. TCCCCCCCCTTTTGGGCTCCGCACGTCGCGGC 447497 29 100.0 32 ............................. ACCGACGCCGAGTTCCGCGCCCGTGTGCTGGC 447558 29 100.0 32 ............................. CAGCTTGAAGGGGCTCTTCCCCCCGTCCTTCT 447619 29 96.6 32 ............................A CAGGCCGTAGATGGTGCCGGTCAGCACTGAAA 447680 29 100.0 32 ............................. AACGAGCGCGAGATTCAGGACCTGCAACTGGC 447741 29 96.6 32 .......................A..... TCGGCCAGCACCTCGCGGTCGTGCAGCCGGCG 447802 29 96.6 32 ........T.................... CGGGGGTGACCTCACCCTCACCGGCCGCACCA 447863 29 100.0 32 ............................. TCAGCGCGCCAGCCTTCGCGCTTCAGCGCCTC 447924 29 100.0 32 ............................. ACATCCTGAATCATGCGCTTAATGCTGTCCTG 447985 29 96.6 32 ...........G................. GGAATTAAATTCAGGCGCGAAACTTTGGCCGA 448046 29 96.6 32 ...........G................. CGTGGGCCAGGGCGTAGCTTTCCCAGAGCCTG 448107 29 93.1 32 ...........G......T.......... CCTGTAGGCCAGAAAGAGTAATGGCGTACTGA 448168 29 96.6 32 ...........G................. ACCAGCTCCCCGAACTTGGGCGCCTGGCCGTA 448229 29 96.6 32 ...........G................. GTGCCAGCCGCGCCTTCATGCCGTACCGCTTC 448290 29 96.6 32 ...................T......... AACTCGCGCAGCAGCGCCACGTTGCCTTCGGC 448351 29 79.3 32 .........T.T.T..A.A.A........ CAGCTGGTTTACCGCACCACCATCACGCGAGC 448412 29 75.9 32 A.......T..G.A...T.A........A GTGACCAAGCCACTCACGAATCAGCCCCTACG 448473 29 72.4 0 A....TT.......A..A..A..A....C | ========== ====== ====== ====== ============================= ============================================================== ================== 70 29 98.0 32 GTTTTCCCCGTATGGGCGGGGATGTTCCG # Left flank : TACCTCAGCACCTGGCCCCTGCGGGCCACCCTGGCAGCGTGGCGGGCCGCAGAGATTCCAGGGCATATCTCGAACACAGCGGGCCTGTATGTCTGCAATTTTGTGCTGTACGCCGCGCTGCATGCGCTGGACAGAGGTGGCCGTGCTCACATTCCCTGCGGCTTTCTACATGTCCCGGCCAACGCAGCGGTGGCGCTGGCCTGGCCCGAGGATCGCCCGCCACTGCCGTATTTGCCGCAGGTCGAGATTAACCGCGCGGTGGAAGTGGCGCTGGAGGCTATTACGCACAAAGGGGTTTAATGGTGCTTGGAGATCAGGCTGGGACAAATGGAGCGCTGCACCCCGCTCTGACGGATGCCGCCCAGGGTCAGAAGGCTCAAGCTGTCAGACTTTCATCGCAGGCCTGTTGAGCCGCGCCGCATGACAATGTGCTTTGAATCGGAAACCCTTTAAGGGACTACAGGGCGAGAACGCAGGTAAAATATGCGTGATTCCAGAGT # Right flank : CATGCCATTTCTATAGCCGCGCCAGACAGTCAAACCTGCCTCCAGCCCAGCACCTCGCGGCCTGTTACGGAAACGGCGCGCGGCCGGGTTGCCAGTCTCCTCTTTCCCCTCCAGCCCAGTGCCACACCCCTTCACCCGCAGGAGCGGCCGCCAGCGCCGCCTTCACAGCCTCCAGTGACACGCGGCGGGCAAAACGGGTCCGGGCATGCCAGGCCGCCAGCGTCGCCTCGGGCTGAGTGGGACGCAGGCCCCGCAGCGCCGCGTGGGCGCGGTTAACCGCCAGATCAAACAGCGCCGGTGGAACAGCGCCGCCCGCCGCCTCACCCGCCGGGCTGGGGTCAGTCAGGAAGGGCTGCTCCTGGGGCATGTCAGGCCAGTCGGGGCCGGTTGGCCAGGGCGGCCATCTGCCCAGCGTGCCAGAGGGTATGGCGGGCCAGTGCACGCAGCAGCTCGGCCACCGTGGAGGTCGCGCCAGCATGATTCACGGAGAGCGAGAGGCT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTATGGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 85325-76506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXU010000017.1 Deinococcus sp. HMF7604 17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 85324 29 100.0 32 ............................. TGTGAAATGGGATGTTCAGCGTCAGGCTAATA 85263 29 100.0 32 ............................. CGAACATCCATACCCGTTTTGACAACTTGATC 85202 29 96.6 32 ............................T TCCCCAGCGTGGTAGATAAATAGATCAGCCAA 85141 29 100.0 32 ............................. CGTTCGCACTGGGGATGGGTTACGACTGGCCG 85080 29 100.0 32 ............................. GCCCTTGGTTGACAGCTGAGGCTCTGCCTCTA 85019 29 100.0 32 ............................. CCTGAGCGCGTGGCGATGCTGACCCCTATTGC 84958 29 100.0 32 ............................. CCGCTGCACACGCCAGAGCTGCCTGACTGGGC 84897 29 100.0 32 ............................. CTAAGCTGCGCCCCTTCGTCACGTCGGGCCGC 84836 29 100.0 32 ............................. GGGCTTGCGGCCTGTGTCCTGCATCCACTGAG 84775 29 100.0 32 ............................. CCCATCGGCCCCGGCGACGTGGCAACCCTGAG 84714 29 100.0 32 ............................. AACTTCCGCGCTGAGCAGGCAGCTGCCGATGA 84653 29 100.0 32 ............................. GCGCTCACCAGTGCGGGCAACAGCGCTGGTGC 84592 29 100.0 32 ............................. CACCTGGACATGCTGCGCCGCGCCCGCACACA 84531 29 100.0 32 ............................. TCCGCCCTGGTCAACAGACTCACGGCCCAGGT 84470 29 100.0 32 ............................. GTCTCGGGGGTATCGGCCGGCACAGGAAAGGT 84409 29 100.0 32 ............................. ACAGGAGAACGGCACTCCCACCACCTGGGACG 84348 29 100.0 32 ............................. CACGATGACCCCGCCTACCACGGCGAGGATGA 84287 29 100.0 32 ............................. CTGGCGGGCCTGTTGGAATCGGATGAGCCTGA 84226 29 100.0 32 ............................. AACAACCCGCGCGCCCGTTCTCCCTCCCCTGT 84165 29 96.6 32 ............................T CCAACGGGGCTTGGGGGCCACCAGCTGAAACA 84104 29 100.0 32 ............................. AGGACGTGGAGAGCCCGAAACTGATCGGGAAT 84043 29 100.0 32 ............................. CCCTGATGACCCAAATCAGTGCGGGCATACAC 83982 29 100.0 32 ............................. GGTGGGCAGGGGAGGGTAAACCACATCTCCGG 83921 29 100.0 32 ............................. CATCGCAACATCAAACGCGCAAAAGCCCGAGA 83860 29 100.0 32 ............................. CCGGTATCTACGGGCAGCAGGAACACCACGGC 83799 29 100.0 32 ............................. CCCTCGCCTCGCTGGACGGCTTGGCCCTTGGT 83738 29 100.0 32 ............................. TAGATACCCTGTAGCAGTCGCCAGTAAAAACC 83677 29 100.0 32 ............................. TCTCAACCTCTTTGGTGTTGGTGCTTCCGCAG 83616 29 100.0 32 ............................. CCGCCGCAGGGAGCTAAATGTTCAGCCGCGAT 83555 29 100.0 32 ............................. AATGTCGTGACCACTGGAGTCAATCAAGCCAT 83494 29 100.0 32 ............................. GCGCGGTAGGCCGCTGTCAGACGAGAGATTAG 83433 29 100.0 32 ............................. AAGTGACCGAGGCGCAGGCGACTGAACTGATC 83372 29 96.6 32 ............................T CCACGCCCGCCCACAGCAGGCTTTGGTGCCCT 83311 29 96.6 32 ............................T TGGTTGAACTGCTGGGCGCGGAAGCTGCCGCC 83250 29 96.6 32 ............................T CACTTGACGGGTTGCCTTATCCACAACCTGCG 83189 29 100.0 32 ............................. ACATGGGCCTGCTGACGGAAATCACGCAGGCG 83128 29 100.0 32 ............................. ATGGGGTCATTGACCCGAGTGAACAGGCGCAG 83067 29 100.0 32 ............................. CTGCTGGAGTTCCGCAGCCTTGAGGAGATTTC 83006 29 100.0 32 ............................. TCCTTCCACCAGTCGCCCGTCTTGGCGTTGGC 82945 29 100.0 32 ............................. TCACCGGCAGCATCACCATGCGGGCCGGCGCC 82884 29 100.0 32 ............................. TGGCACATGCCCTGCTGGGTGACGGGGCGCTA 82823 29 100.0 32 ............................. TTCAGCACAAACTGCTGGGCCTGCTTGAGTTC 82762 29 100.0 32 ............................. TCTTCATTTTGCCTGAGTGACTTTCCATCCTA 82701 29 100.0 32 ............................. CATCCTGAGGCGCATCTATGCTGAGCAGGACC 82640 29 96.6 32 ............................T AACCGAAGCGAGATTTACAATCTCGTTAATAG 82579 29 100.0 32 ............................. GCCGTTAGTAGGAGAATGATGGCCGCCGCCGC 82518 29 96.6 32 ............................T GCATGACTTGCCATCAGGCGACGATTTAAAAC 82457 29 100.0 32 ............................. CCAGGCCATTACTCGCCTTCCTCTTGACCAGC 82396 29 100.0 32 ............................. TGTGCTGCCCATGCTGCATTGTGTCCTTTCGT 82335 29 100.0 32 ............................. GTTGCGGCTGGTAAGAGGCCTTTCTCTGCTTT 82274 29 100.0 32 ............................. AATTTTTCTGGTTTTCTCGCTCGTTCTCGCTC 82213 29 100.0 32 ............................. CACCAGGTCGCCGTCCTGCTGATGCCACACCC 82152 29 100.0 32 ............................. GCGGTGCTGGTGCCGGGTAACCCGGCGCAGCG 82091 29 96.6 32 ............................A TTCGCATGGCCCATATGGAATGTTATCGGGCT 82030 29 100.0 32 ............................. GGTCAGGCTATCTAGTAGAACGCTTGACACAT 81969 29 100.0 32 ............................. CAGGGAGGAGCTTGGGGAGGGCGTTGCGGCCA 81908 29 100.0 32 ............................. CTCCTCGGCAGCACCCCACTTACAAACGTAAT 81847 29 100.0 32 ............................. GTGCCGCCGATAATCGTCACGCCCTGCCAGAA 81786 29 100.0 32 ............................. GCTCTTGACGCCGGGGCACCTCGTGGGGGTGG 81725 29 100.0 32 ............................. CCAATGAACGCTTTGTGCAGCGTATGGCGGAC 81664 29 100.0 32 ............................. AACGGGGATTCGTTCCCGATGAGTGGGTGCAG 81603 29 100.0 32 ............................. GCCCAGGAGCTGCTGCTCCCGCTCTGCCTGCG 81542 29 100.0 32 ............................. AACGCGGCAGATAACGAGATTGTTCCGATGTA 81481 29 100.0 32 ............................. ACGTCCTCCAGAATCTGGTCCAGCGTGTGGTT 81420 29 100.0 32 ............................. GACTACTGACATGACTAAACTGATCTACACCA 81359 29 100.0 32 ............................. TCACCCGCTCGCGCATCGCCCTCGACTGGGAC 81298 29 100.0 32 ............................. GCGGACGTCGCGGTTTAATGCCCGCCCAGACG 81237 29 100.0 32 ............................. CCGACACCAATCTGACGACATTCAGCGACCAC 81176 29 100.0 32 ............................. AGGATGTAAGAGCACAGCGTGTCAAATATCTT 81115 29 100.0 32 ............................. CTCGTTCTCGTACCTCTGTCCTCGTCCGTAAG 81054 29 96.6 32 ............................T CAGCGGGCGGCACGATCACCACGGCCGCGAGC 80993 29 100.0 32 ............................. TGCCGTCTTCTGCTGCTTTGATCTCGGTGTGA 80932 29 100.0 32 ............................. TTATCCGCGCGCCGGTTGTCCTGTATCCGCAC 80871 29 100.0 32 ............................. CACATTGCAGCGCTGGAAGCGAAATACGATGT 80810 29 100.0 32 ............................. GCGTACGAATGGCTAGGGCCGCCACCGCGCAG 80749 29 100.0 32 ............................. CCCTCATGGGCGCTGTGCAGGGGCGCGCGGTG 80688 29 96.6 32 ............................T AACTGCCCCAGCACGGCGGGTCCGTCGTGTCT 80627 29 100.0 32 ............................. CTGCCCCTGTCGGCCTTTGGGCGGGAATATCA 80566 29 100.0 32 ............................. GCGCGGGCGGCCTCCAGCGTGGCCGGGTCCAG 80505 29 96.6 32 ............................A CCGATGCCCAGCCGCACTGAGTACCTGGCGGG 80444 29 100.0 32 ............................. ACAGTGTGCGGGTCAGTCCCAGCACCAACGTC 80383 29 96.6 32 ............................T GATTTCAACGTCGGTATTCCACTGGGCACGCT 80322 29 100.0 32 ............................. TCCTGATGCTCGGACCATGTGGCTGTCATGCC 80261 29 100.0 32 ............................. TTACTCAGAAAAACACCATCTGGAAAGGTTTC 80200 29 100.0 32 ............................. TACATGGCAGCCGGCGCGGTCACGCTGAACCT 80139 29 100.0 32 ............................. GCGCCACCTGCACCTGCTCTGCCAGTCGCATA 80078 29 96.6 32 ............................T TTCTATTGAACACGCCCCTGGCCGTTCCCCAG 80017 29 100.0 32 ............................. CGGTACAGGGACCATCACCATCCGGGATGAGG 79956 29 100.0 32 ............................. CGGTCTAGCGCCTTCCCAATGTCAGCACCATC 79895 29 100.0 32 ............................. AGGCGGCAGACGCGCTGGTCGCCGCCCTGAAC 79834 29 100.0 32 ............................. TAGTCCATGTCTTCTGCGTACCGCTTGCCGAG 79773 29 100.0 32 ............................. GCCATTGAGCAGGGGATAAAGTTTGAGGTGTA 79712 29 100.0 32 ............................. AGATTGACAATCGCGTCCACAGAAAACCCCCA 79651 29 100.0 32 ............................. AGAACGGCAGCAACAGGGAACAGGGTGCACAG 79590 29 100.0 32 ............................. ATCAGGCTCTGACCATCTGCGACGAGGTCGGC 79529 29 100.0 32 ............................. TATCTGGCCGAGGATCTGGCCTTCGTTGAAGC 79468 29 100.0 32 ............................. TACAGCTGCGGGAAGGTCAGCGCCATGACCTG 79407 29 100.0 32 ............................. GTTTCCAGCTCGGCCACCACGCGCAGACCACG 79346 29 100.0 32 ............................. GCGGCACTTCCGAGTGCTTCTATCTCGCTGGG 79285 29 100.0 32 ............................. TTTGGGGAGCTGGTCTTTGTGGACGGCCTCAG 79224 29 100.0 32 ............................. TATCGCCGGACAGCGGGCATGTTGCTGCCGCT 79163 29 96.6 32 ............................T ATCCTTGCCGAACAATTCCCACACGCTCTCGG 79102 29 96.6 32 ............................T GAGGATTCGGGGCCGCTGTTTGGTCATGGGGC 79041 29 100.0 32 ............................. TCAGTAAACCAACGAGAGGCGAGGGTGGGGGC 78980 29 100.0 32 ............................. CTGCCGCAGCAGCGTTTCGGCCTGCGTGCGCG 78919 29 100.0 32 ............................. TCAAGCCGCGAACGGTCAGCGGGCCAGATGGT 78858 29 100.0 32 ............................. CTGTCGCAGGGCATCCGGCCATCCGTTGACCA 78797 29 100.0 32 ............................. AATTTTTCGATACCGGCGTCGTTCTCTGCCCC 78736 29 100.0 32 ............................. TGGGGCGCGGCTGAAGAGATGACCAAATTGCA 78675 29 100.0 32 ............................. ACCAGGACGAACAGAGTCAGGGGCCAGAGACC 78614 29 100.0 32 ............................. CGGCTGTCAGGCGGGAAACCAAACCCGTGTCA 78553 29 96.6 32 ............................T AATCTTTTCGGTAATCATCTTCGGTTCCTTCG 78492 29 100.0 32 ............................. ACGCTTTGGTCATGTACAACCCCATTGACGCC 78431 29 96.6 32 ............................T CTCGACAGAGGCCACCGGCAGATTGATGACCA 78370 29 100.0 32 ............................. GCCATCCCCAGGCCGGGAAATTTGCCAACAGA 78309 29 100.0 32 ............................. TTTTAAGCGGAAACAAAAAATCCACTCGCACT 78248 29 96.6 32 ............................T TTGGCGACTTTCAGGGTTTGCGTAATAAACGG 78187 29 100.0 32 ............................. CGCGACCGTTGCTCATCATCCTCGACCCCGGC 78126 29 96.6 32 ............................T GATGTTGGGCAATTTATTGAACTTCAGTGCGG 78065 29 96.6 32 ............................A TGGACATGCGGATTTCCCCGAACGTGTCCTCA 78004 29 96.6 32 ............................T CACACGCTCCTGGGCGCGTGTCACGCGGGCAT 77943 29 100.0 32 ............................. GCATTTCGCAAATTCCTGTGATGCTACTGGGA 77882 29 96.6 32 ............................T CTGCTCGGTATGCTGCCGGATGGCGTCACGGG 77821 29 100.0 32 ............................. CCAGTTGAGAAAATGGGCTTTTAATTCTGGGG 77760 29 100.0 32 ............................. GCCCTGCCGAGTAACAACGCCCTGCGGCAGTT 77699 29 96.6 32 ............................T TTAGGCAGCCGCTCCCGGAGAAATTCACGCAA 77638 29 100.0 32 ............................. AAATCACGCCTTTGGCTTACTCCGGTGCTCCC 77577 29 100.0 39 ............................. CCATACGCCCCCCTCCAGGTGCTGCCCAGCCTGGCCGAA 77509 29 96.6 32 ........T.................... TCGCCACATCATTAGCACTCGCCATCCTTCTT 77448 29 96.6 32 ......................C...... CTGATGATGTCCAGCGCCACCGACGCCATAGT 77387 29 100.0 32 ............................. CCCTCTACGCGGCAGCGGAAGCGGGAGGTGAC 77326 29 100.0 32 ............................. ACGGTCACGGTGCGCGTGAATGACGCCATTGC 77265 29 100.0 32 ............................. GCGCGGGGGTGGCCCAGGGAGACCGCGCGCTC 77204 29 96.6 32 .......................A..... GCGGAAACAGAGGTCGCGGCCGCCGCGTTGAG 77143 29 100.0 32 ............................. GAGTCTATGACTCGGTTAACAATCTTCGGGAG 77082 29 100.0 32 ............................. CACAGGAACGAGTGGCCAGTCCAACATAAATT 77021 29 100.0 32 ............................. AGCCTTTAGAGTTCGCGTGTTTGACAGATGTG 76960 29 100.0 32 ............................. TTCTGCCAGATTTCCGAGTGAACGACCAGCCA 76899 29 100.0 32 ............................. CCGTCTGAGAGGTCGAATATCTCTGTGTAGTT 76838 29 100.0 32 ............................. GCGTTGATCAGGGCACTGTCCAGCCCCCCGAC 76777 29 100.0 32 ............................. CCGTCGTCGATCACGCTTGAGCGCGGGCTGAA 76716 29 100.0 32 ............................. GACAAGCTTTGGAATCGGAACCCTCTGTGGAC 76655 29 100.0 31 ............................. TCATCGCTGACACGACGCTGGTGTTCCTGAA 76595 29 100.0 32 ............................. TTCAGCCAGCCAGTCTCGTTCAGCATCCGCAT 76534 29 93.1 0 ........T.....A.............. | ========== ====== ====== ====== ============================= ======================================= ================== 145 29 99.3 32 GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Left flank : ACCCTGCTTCCTCTTGGAAAGGCTGGCTTAGCCGACGGGCGTGCCTCCCTTGGTGTCGTCTCCGGCGACCATTGGCCCGGAGACTCCCGGTGTAGTTGGTAACGTGGCACTGACTAAACAGAGCGCAGCGAGGACAGAGCAGACAGCGAAAGCGAATTTCGACATAGCAACCCCTGACATGGCCCCGGCTGGGGTCATGGATGACAAAGGCTTCTAGGCACCAGCCGCGCCGTACGCTCGCGGGTGGGCTCTAGGGAGCCGGGCGGAAAACGGTCCAACCGCCACCTGATCAGGGGAGAAGGGCCGCAGGCAGTCCTCTCTGGCGATGACTTCAGCTTGCTGGGCGTAGGCGTCCAAACGTGACGCTGTGCTCTATCGACACATCGGGCCCTACACTGAGGAGGGCTGCACGCCGGGGCGCATGAAAATGTAAGCTGTATCTACCCTGGTGGCAGAGACCTGCGGCCAGGATTCGAGCGAGAACGCCGATGTTCCGAAGT # Right flank : AGCCTTACCCGACTGGTCTGGTTGCGCGACCTATCTTCCCTTTGTGGGCTACCTCGTCTCCAACCATCCTCACAACTCCCTTTTCATTCAGAGCGGGGCACAGGTCGCGCCAGAAATGCCTCAAAGTCGGTGGGGAGCAGCGGGCGGGCGAACAGGTAGCCCTGAAAGCGGGTGCAGCCCAGACGCTGCAGCGCGCGCCACTGCGCCCCGGTTTCGACGCCTTCGACAATCACGCCGATCTCCAGGCGGCGGGCCAGCGCCACCACGCTTTCCACCAGGGTGCGGGCGGCGGGGCTGCTGAGCAGGTCGGTAATAAACGAGCGGTCTATCTTCAGGTCATCAATCGGCAGGGCTGTCAGCACCGACAGGTTGGCGTAGCCCGTGCCAAAGTCGTCAAGAGCCACCCCCACGCCCATTTGCCGCAGGCGCTGCAACTGCGCGCGGGCCGCCGGAATGTCGGCCAGCACCGAGCGCTCCGAGAGTTCCAGCTTCAGGCGGCG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 99578-101131 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQXU010000017.1 Deinococcus sp. HMF7604 17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 99578 29 100.0 32 ............................. GAGGCAGCCAGGACAGGCGCACCAGGGCGGAG 99639 29 96.6 32 ............................A TCTTCGTTCAAGACGCGTTCCGTGTAGGCCAG 99700 29 100.0 32 ............................. CCATCGCTGGATTTGCCACCCTGACCACCAGC 99761 29 100.0 32 ............................. TGAAGGACGCGGCCCAGCAGAACCCAGCCGCG 99822 29 100.0 32 ............................. CGCGTGCGGCGGATTCTGCGTCGTACACGCTA 99883 29 100.0 32 ............................. CTGGGGAACGTCTCGCGGTACAGCTTGCGCTC 99944 29 100.0 32 ............................. ACCGTTCCGGGTGGCTATTACGCCACCCAATT 100005 29 100.0 32 ............................. GCCAGCCAGAAAGAGAAGCGGGATCCGAAGGA 100066 29 96.6 32 ............................T ACATCATCACTACTTCCATGTCCCAGCAAAAC 100127 29 100.0 32 ............................. CTGTGAATTTATAACCATTTTCAGCTAAAAAT 100188 29 100.0 32 ............................. ATTCCCGCGCTGTGGACGCACAGTTGCGGGGT 100249 29 100.0 32 ............................. TCAAGACCGAGCAGCTGCCTGTGCAGGTCGGT 100310 29 100.0 32 ............................. CAGTTGGGTGGACCCGGCAGTGGCTGGTGCTG 100371 29 100.0 32 ............................. CGTTTGCGAAGTTCAGTTCGGGCGACATCCTG 100432 29 100.0 32 ............................. TGGTATGAGCGCCTGGGCTGGGCGCTGTTCGG 100493 29 100.0 32 ............................. AGGACATCGACCCGGAAGTGATGCAGGAAATC 100554 29 100.0 32 ............................. GTCATGACGCCACCTTCGCCGCCGACTGGGGC 100615 29 100.0 32 ............................. GCGCAGACCGAACCCCGCGCCCCTGACCCCGC 100676 29 96.6 32 ............................T AAGGGCTAATATCTTAACAATGGCCGACTCTG 100737 29 96.6 32 ............................T ACACCAGGCCTTCTTCTCTTTGCCGGTGGCAC 100798 29 100.0 32 ............................. TTCACGCATGACCCAGCTCATTTTCAGATAGA 100859 29 100.0 32 ............................. CACATTGTCGCCATGCTGCGGGCGCATGGCCC 100920 29 96.6 32 ...................T......... TGATCAGTGTGGACTCAGAGAAGGGCGGTGTC 100981 29 93.1 32 ...................A......A.. CAGACGGGCAAAATTTCGCTCGCGCCTCAATT 101042 29 82.8 32 .........C.A.....A..A.....G.. AGGGCGCACGTTTGCTAGCAGGTGCGCAGGAG 101103 29 93.1 0 ........T......A............. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 98.2 32 GTTTTCCCCGTGTGGGCGGGGATGTTCCG # Left flank : CTCCTGACCCTGCTGGACGACCACCACGAGGAGGACGGCGATGACGACGATGTGGGCGACTTGTGGGACCCCGACGGCGACGTGGCTGGCGGGGTGAATCATGCTGGTGATGACGCTTGAAAAGGTGCCCCCCAGCCTGCGCGGCGAGCTGACCCGCTGGCTGATAGAGGTGCAAACGGGCGTCTACGTGGGGCGGGTCAGCGCCACGGTGCGCGACCTGCTGTGGGACAAGGTGGTACAGCACGCCCGCGCGGGCCGCTGCACGCAGGTGTACCGCACCAACACCGAGCAGGGCTTTGCCATCCGCATGCACGGCGAGCAGCACCGCACGCTGCTGGACCTAGAAGGTTACGCGCTGGTGGCTGTGCGCGACGCCCGCCACGCAGAATTGATGCGGGACTATCAACCTCCCGAGGAACTTGAAACTTTGTGACTTGAAAAGCACGAGGTGTAAGGCCCTTGGTAGTGGTGAGGGGCGGCCGGTACCGTTATCCCAAAGT # Right flank : GCCCTACGTGTCCTCCACCGGCCCGGAGGACACTGCGCCTCAGCCCCTGACCGGGCAGACCCGCGCTTGACTTCGCAAGCATCAAGATGGCTTGGCGCTCCCCCAGTCATCAACAAAGCCCTCATCATTCGCGTCTTCCTTTCAGCCCCTCGGCGCGGGATGATGCGGGCGTTCGCCGGCTTCTCTATTCTCCCCTATCCCGGAGGTTTTCTATGGTTCGCCCCGCTCCATCCCTTCTGGTCCTCACGGGCCTGCTGACCCTGCTAACAACCCCCGCTGCGGCCCAGGAAGAACCCACTGCGCCCATCAAAACCAGCATCAAGACCTGCGGCGCCTACACCCTCAAACTCAGTGAGAACGGCTTTGACGACCCCGCCGACCGCGTGAGCATCACCCGGGGCGGCGTCACCTCCGCCACCATCAGCGACACGGCCGTGGACGTGAACTGGTGCCGTGACGTGACCGGCGACGGCGTGCCGGAAGTGCTGCTGTCCGGCTTT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGTGGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //