Array 1 4458-5304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHCD010000029.1 Bacillus cereus strain N27 MPPGPCPH_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================================== ================== 4458 32 100.0 34 ................................ TCTTTGAACGAACTCTTTAAAAGCTTGCCAATTA 4524 32 100.0 34 ................................ AGTTGAGTGAATTAATGCTCGTGAGTGATTGTAC 4590 32 93.8 33 ...........A......A............. ACTCCTATTCATTTTTCAAAGATCGTGCTTCAA 4655 32 90.6 34 ...A.....C.........T............ TTATCTTTATCTACTGCAACTACACCAAAATTAT 4721 32 93.8 33 ...........A............T....... ACTCCTATTCATTTTTCAAAGATCGTGCTTCAA 4786 32 90.6 35 ...A.....C.........T............ TTAACACGTAAGAATCCATTTTTAGAAATTACATT 4853 32 93.8 33 .........C...A.................. ATGCCAATCGGTGTACAAGCGGACTTCATTAAC 4918 32 93.8 33 ......T............T............ TACACAGACAAAGAGGGCAACCCTACTCGCCTT 4983 31 96.9 34 ..............-................. CCCTGCTGATGCAACATCGCTACCTACATTTTGT 5048 32 93.8 35 .........C..........A........... TCAGACGGCTTGTCTTTTTCCGTAGGCTTATCTGT 5115 31 87.5 34 ......T..-.........TA........... TACCTAGGGTTTATATTTATCTGGAAAGCTCATA 5180 32 96.9 62 .....................A.......... GGGGATATGCCAGGCGTTTGGCAAAGTGTTATTGGTTTATCAGGAGTCATTGGCTTGTCATG 5274 31 87.5 0 .........C.-.A......C........... | ========== ====== ====== ====== ================================ ============================================================== ================== 13 32 93.8 36 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TATCTAGTTATATATTAAAAGTTGAACACAAATAAAGAGAAGAATAATTAAAGTATTTTTGAGTTAGCAAAATAAAGGAATTTTTAGTATTCAATATTCTTAAGAATGTTATATCATAAAAAAAGATCAAACGATGATATAAAGAATAAACTTGATAGGTGGATAGAGAGACAATATATAGTGAATTTTATTGTAAATTACGAATCAATATATTAAGGGTATTATGAAACTATACATTTTGGTTATTCAATTAGGTAATAGCTATGAAAATAAGGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGCCCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTTGAATTCTCATGCTTTATAATGGTGATTTATGATTTTTATACAAATTACTTTATTAAATAAAAACATTTGTATATTTTTGGATAAAACTAACGTATTTTTGGTTGATTTCGAACACAAATCGGT # Right flank : TTAGCAATGCTCTGGCTTTAAAATGCTCTGCAGATGTAGATACTCAACTGGAAGTATCTATATCTGTAGTATCTAACACACATGTTATAAACATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGGCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATCGGTATAAAACATTTAGCTGGTTTAGCAGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCT # Questionable array : NO Score: 8.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:-0.12, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 15007-15235 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHCD010000029.1 Bacillus cereus strain N27 MPPGPCPH_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 15007 32 81.2 33 ......T..CTTGC.................. TACAAAATTATGAAGGAATATGAAAATACCCTC 15072 32 93.8 34 ...........T.......T............ CTTAAAGCTAGCCCTAGATACATCAACTTTAGTT 15138 32 100.0 34 ................................ TCAATTAGGTGCAGGTACACACTTGGAAGTATTA 15204 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ================================== ================== 4 32 93.0 34 GTCGCACCTTAAATAGGTGCGTGGATTGAAAT # Left flank : TGATCCAATTGACATTACTAGTATGCAGATTACGAAAATTATAAATTCTGAGCATGAGAAGGATAAAGGTTCAGATACAATTGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGATGAGGAGAAGATTAAAAATGCACTGGTTACACTGTTTGAAAATGATGCATCAGCAGCACGCCCTGAAGGAAGTATAAAAGTACATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCCTCTGCAAAAGTACATCATTTATTAGAGGTTAAACGGAATATTGACGAACCAAAAACAATCGATGATTATACAGTATTGGTACATGAATTAGATGATTTAAAAGTTGAGATTATTAATGGAATGTAATAAAAAGCGTCAGAATAGTTGAAAGAAAGTATCCTTATAAAGATATACTCTATCAATTTATTAAAGGAAA # Right flank : GCCGTTAACGAAAATATAAAAAGCATACGTGCCGGTCGTATCTCATATAGGAGCGTGAGTTAGGACTGGTAAGATGCTTGATAGTAATTTAGTGTCTCTGCTGGAATAAGAGGACCTGTTTCAATTCATACGGCCACAAGTGTTGATCCGATTGATATTACTAGTATGCAGATTACGAAAATTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAATACACAGTTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGACCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAA # Questionable array : NO Score: 6.70 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTAAATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //