Array 1 10863-13495 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000080.1 Anabaena azotica FACHB-119 contig80, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 10863 37 100.0 35 ..................................... AGGGTTTTGGATGCCAATCTTGATAAAACCTCTAA 10935 37 100.0 33 ..................................... TAGGCTATCAAGCCGAGGTGGGAGCGCGGGTAA 11005 37 100.0 34 ..................................... TTTCAAAAAACGCATTAACCTGATAGGATTGTGT 11076 37 100.0 37 ..................................... TACCTCTAAATTAACTGACACACTCAAGTAGTTCGAG 11150 37 100.0 34 ..................................... AAGGATAGAGCAGACTGAAAACTCATTGCAACTT 11221 37 100.0 35 ..................................... TATGGCTAGTAAGTGTACTTGAGAACGGTACTATT 11293 37 100.0 35 ..................................... TCTAGTAGTTGTATGTATTTTTCTTTCTTCTTCAT 11365 37 100.0 35 ..................................... TTTTGAGAAAAAAGTAGGAAAGTTAAAAACTTAAT 11437 37 100.0 35 ..................................... AATTTGCTGTATTTTCATATTACAAATTGAAAAAA 11509 37 100.0 35 ..................................... ATGGACAATCTTAATGTATTAAAGATATATACCAT 11581 37 100.0 34 ..................................... TAAAGATTTATTAGAAGGTTATCATTATAAAGTG 11652 37 100.0 35 ..................................... AGCAGTCTAAGTATGCTGTAGCGTACCAAGATTTA 11724 37 100.0 37 ..................................... CAGCTATACTAGATATACCATATACAGATACCTCGAA 11798 37 100.0 35 ..................................... TCACCAAGTAAAATGGTATTCCCAGGAATGGTTGG 11870 37 100.0 36 ..................................... TTCTTATGATTTAAAATTAATCCTGGGGATTAATTT 11943 37 100.0 34 ..................................... CCTTCTGGAGTGGTATCGATATTTAGCTGTGCAG 12014 37 100.0 35 ..................................... TCGCCCAATTCAAGTTCCTTGGCTTCATTTATAAG 12086 37 100.0 40 ..................................... CGGGAGTTGACCAGGGCTAAGGTTTCGCAAGCGATCGGAG 12163 37 100.0 38 ..................................... TCCCGATCAAGATGTCCCTACTTTCTGGGGCGCGCAAC 12238 37 100.0 34 ..................................... TTTGTATGCGCTTAAGAGGTCTTCAAAGTTTGTA 12309 37 100.0 34 ..................................... ATTGGTAGCAGAAGGTAAGGTATTAAACTGTAAC 12380 37 100.0 34 ..................................... ACTTTAATCCGATGGGTAAAGCATTCGCTGGAAA 12451 37 100.0 35 ..................................... AATATAAAACTTTCTCTGACTTTTGCATTCGGAAT 12523 37 100.0 34 ..................................... GCTTTCTCTTCCATTTATGGATATCAAAAAACTA 12594 37 100.0 39 ..................................... TTTTTGACCCACGAAGTAGCCAAACGCCAAGCAGCCAAA 12670 37 100.0 34 ..................................... TGAGTCTGCCGCTAGAAAGGAAATCATTATTAGA 12741 37 100.0 36 ..................................... GGCGCAGTTGGTTGGGCCACGGCAAGACCTTTCCAA 12814 37 100.0 38 ..................................... AAGCATTTTTTGCCATTGCAAACATAGCAAGGCATTTG 12889 37 100.0 35 ..................................... TTATGGACTTATCTCCTATAAAAAGGAAAATACTA 12961 37 100.0 36 ..................................... GCAAAGATAGTTCTTATCCTTCTTTTGAAATTATTA 13034 37 100.0 33 ..................................... TAAATGTTGTGGGTGTAGCATCTGTAGTTTTAG 13104 37 100.0 32 ..................................... ACATACCATAAGCCGCTAGCATCAGGAATAAG 13173 37 100.0 34 ..................................... TTGACTTTCTGGAAGAGCAGCAGGTATTGCCTAC 13244 37 100.0 35 ..................................... GAGAAATACCCGTTTGAACTTGCAGAAGATTATAT 13316 37 100.0 35 ..................................... TCCCATCGTCAGTAGTACCCATTGCCTCTGTAATT 13388 37 100.0 34 ..................................... CATGACGCGATCGCGGAGCTAGTGAGAATTGTTG 13459 37 75.7 0 ..G......T.CC.A....AT.....AT......... | ========== ====== ====== ====== ===================================== ======================================== ================== 37 37 99.3 35 GTTACAAAACCTACTAATCCCTATCAGGGATTGAAAC # Left flank : TGTGAGTGCGATCGCTGATTCCTTTGAGAAGAAAATGAACGAGCGTTTCACCTATCCACATACCAACTTAAACTGTTCTTATCAAGAATTGCTGTACCTACAGGCGAAACAGTTAACTTGGTTTTTAACTGGCGAAATTGATGAGTATTACTCACCAGATATTAAGTAAACTAACAGTGTTAAAGAGCGATCGCACACTACAAAGCTTGGGCTGAGTCATCTGTTGCCAGCCGAGGAACCTCCATCAACTGCGTCAACCTATAGGTGTTTTTTTCGGTCTTTGATTTTTTGGAGTTCAATCCCTTGCACTGTAGGGTTTTCCAGCTTTTTCTGGTCACAAGAGGTTGACGCAAAGTTCCAAAGCCATGCCAGGACTGGGTTTCGGCTATTTTTGAGAGAATGTCTCTTGACACCCCAACGGCTGAAATGATATTTTATCTCTAGGTCTACGAAAACTGTACCTTGAAAACCAAATATGCTTTAGGTTTGGGAAACGAGCA # Right flank : CTGGTGATTTGACATCGCTTTTAAACTCCAACCTTTTATTGATGGGGTTGCAACAACCTCTGCCACAACCGCGTGTACCTTTGCTGATCATCCGTGGTTCGTACAGCCAGGGCGATCGCTTTCTTGGAACCAACGACGATCGCCAACTTCCTCGCGCGAGTCAATGCCGTATAAAACAAATTCCGCGAAAGCATGACATAGTGTTGCATGAACAGTGGAAATATAATCACTGGGAACTCACTGCCCTGACTACCCTGACCAAAAGAATCGAGTTACTGTCCCAAGTATTCAACTGAAACAATTTTGTCAAAAAAATAATTAGCGTCAATGGTTTTTTGAATACTTTCTGGTAAATAAGTCTGATGATGTACACTAAAATCAACTAGCTTTTGAAGGTGGAAGTATGTACATTGGATTTTTCTCCTAGCAGCGAGGTGAACAAAATTATATTGGTAGCTTGCATTGGCACTTAATCCTTTACCTTTAACACCCCGTGTATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAAAACCTACTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 9336-11524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000086.1 Anabaena azotica FACHB-119 contig86, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 9336 37 100.0 35 ..................................... GAATGCTTTGTGTAAGGAACTAGGATTACAGCAAG 9408 37 100.0 35 ..................................... TGCTCAATAATCCCAATGATACCTTCAATGAATTG 9480 37 100.0 37 ..................................... CTCTAGCTTCTGAGGTGTTGAGCTTGCCTAGCTTTGA 9554 37 100.0 36 ..................................... AATCCCATATACGGCGGTAATTGTATGGGATTGGTT 9627 37 100.0 34 ..................................... CGAGATTAGAACAACAGCAAACGATGACGACCTA 9698 37 100.0 35 ..................................... ACAGTATGAAGCAAGGAAAGTATTGTATGAAGATA 9770 37 100.0 38 ..................................... CCCGCTTTACTGTCAGCAGTGCCAGCTAGCCGTGTTGC 9845 37 100.0 33 ..................................... TAACTTCTGGTAGTCCGTTCGTTGCTCCATTAA 9915 37 100.0 33 ..................................... CGAATCAATCCTCTCTTGAGCTTTTGCTATCCA 9985 37 100.0 35 ..................................... AGCGCGGCCTTGACCAAATCATTATTGAGAATGCC 10057 37 100.0 35 ..................................... GACTACTCTTACTAACGAAGTGGTCAACCGCTCCC 10129 37 100.0 34 ..................................... GTATATGAAACAGAGACAATGCCAGAGACAAGCG 10200 37 100.0 31 ..................................... AGATAACAATCAGCCAAGTATAGATGGTACA 10268 37 100.0 33 ..................................... AAAGTAGCGGCGGTGATCGCCTTCTTCGACATC 10338 37 100.0 33 ..................................... ACCCCCCAAGGCCAGGTAAGACTTGAATTTTGG 10408 37 100.0 31 ..................................... AACACATACACATCAACAGAGCTTGGTTTTT 10476 37 100.0 34 ..................................... TGCGTATCCTTCATATTCCTCGTAGCGATCGCCA 10547 37 100.0 34 ..................................... TCGCTATCAAAACCAAGTGCATCATTTTCCCATT 10618 37 100.0 33 ..................................... GTTGCAGATTAAAATATTCTTCATCTTCAACAT 10688 37 100.0 36 ..................................... ATATTACCTCATCTACCTAAACTAACCTGACGGTGA 10761 37 100.0 35 ..................................... TTCACTAGCCACCGGGGCAAGTTTGTCTCTTCCCC 10833 37 100.0 33 ..................................... AACAGAAGACACAATTTTTAAATCTTTGGCCTG 10903 37 100.0 35 ..................................... AAGTACTTGGCTGGTTTCCGGGGATTGGGGATTGG 10975 37 100.0 33 ..................................... ATCTGGTAATGACATGATTTTATTAATTAGTTA 11045 37 100.0 30 ..................................... AACTAAAGCGATCGCCTAGCTTCTTCTTGT 11112 37 100.0 37 ..................................... CTGAGATACGGCTATTAACAAATTACCGCATCGTTTC 11186 37 100.0 46 ..................................... GCACTTTGATAAGGAATAGCAGCAGCCGGAGCCGCAGAGGATGCGA 11269 37 100.0 39 ..................................... GAGGATGCCGAAGACGCGATCGCCCAAATTCAAATTAAG 11345 37 100.0 36 ..................................... ATTCACTCAAGAAAAATGTGACTCTTTGGGGAAGTT 11418 37 100.0 33 ..................................... CTCAATTCCTCTGGGATTCCCCAATCGAGAAAA 11488 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 31 37 100.0 35 GTTTTAATTAACATGAATCCCTATCAGGGATTGAAAC # Left flank : TGGTTGAGGGAGAAGGTAGGTTAGGGGACAGGGGACAGGGGACAGGGGACCTGACAGGTGTAGGTTTTTTATTGGTGTTCCAAAAACTTTGGTTTTAGGGTGTAGGGGTGTAAGGGTATAGGGGTGTAGGGGTGAATGAAACAGCGATTTTCTCGTTAGTTTTAGAGTCCTTACTCACTGCTAGATTAAAAACCTACACTTGTGAGGGACAGGGGACAGGGTGAAATTTGCTGTGGTGTGATGGGGAACTTTGCGTCAACCTGTAGGTGTTTTTTTGGAAGGAGCAAATTTTTGGCGGCAAACCCTTATGCTGTCTAGGTTTGAGGCGTTTTGCTGAGAAATGAGGTTGACGCAAGTCTGGAAATGCTTACTGGGACTGAGTTTTACGGTTTTTTTCTATGACCCTCTTGACAAAGCGATCGCTCAAAAGCTACTTTAGGTTGAGATTGACGAAACCGCACCTTGAAAACCAAATATATCAAGCCTTCCAGACCTGGGCA # Right flank : CGCAAATATCCTACCGAAAACTGGGATTAAGATGTGTTTTAAATAAACGTGAGTTCGATGAACCTCTCCCTCCCAACCTCCCTCTCCTCGTAGGAGAGGGAGGAGAAAAGAAAAAATCCCCCTCTTACTCCCCTCTCCTCGTAGGAGAGGGGTTGGGGGTGAGGTCAAAACAACGCTGGTCGAACTCAGGTTAATCAAGAAAAAATAAATACCGCCTAGTATTTACTAAGCGGTATCGAGAGTGATTTAACTACTCAAACTCTTTGGATAAAATACTTCTATCTTCCCACACCGACATATTGGAAGCCGGCGCGTACCATAGTTTCAGGGTCAAGGAAGTTACGACCATCGATAACCACAGCATTATTCATCAACTGAGCCATCTTAGCGTAGTCGAGGGTGCTAAACTGGTTCCATTCGGTTACGAGTACCAAAGCATCACAACCATCAGCTAAACGCTCGGCATCAGTTTCTACCAATACACCAGAAAGACCATGACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTAACATGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 61023-61341 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000019.1 Anabaena azotica FACHB-119 contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 61023 35 100.0 36 ................................... TCGCACTCGCTGTCTCGTTTTTAGGCATTCCAACTG 61094 35 100.0 37 ................................... CCATTCAATATCTGTCTGATGAGGTGTTCTTCGAGTT 61166 35 100.0 34 ................................... CTTTCTGCTGAAGGTCGTTCTCTTATTCAAGGAA 61235 35 100.0 37 ................................... CTAAAATTAAATTGATTATGACGTTGCATGGTCTTGA 61307 35 97.1 0 ................T.................. | ========== ====== ====== ====== =================================== ===================================== ================== 5 35 99.4 36 GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG # Left flank : CGATAAACGCCGATTAGTTTAGATATTTAGTCAATGTTTCTGCCCAATTTAGCCTTAACTGAACCGTATTGGGTGATAGGTGACAGGTCACCGAAAATGATTTTTTAGATAAGCGATGAGATATTTATAGCAGTCAAAGCATAGGTTATACCGTTTCTTGATGAAGATGCACTTTATTCTGCGCTGTAGAGACGTTGCATGCAACGTCTCTACATTGTTTATTCGGCGCAACTTCATGGAGAATTGGTATTAGGACATCATACAATTTTAAAACCTTTAATTTCAAAGGCTTTCAGCCCTGTCAAGAGTCCCCTATCACCTGTCCCCTGCTATACATATCTCATCGCTTTTTTTTGAAATTGTGAGGATGAAAAAAGCGATCGCTCTTTTTTCTCTACAGCTACTCAGAACATATGAGAGAGCGATCGCATCAATTTTTGCTTAATTTAAAAGTTTAAATCCTACCTTTTGAGAGCAACAATATACTCTCGAAAAACCTC # Right flank : GGGCTAGGCTGTAGAAGCTTGACCCAGAGCCGATCCTACAACAGTTTTTTGGGGGTTGTCAAATTTCTCCTAGATAAATGACATTAATTCTCAACAACTTTAATAATGACCAACCTCAAACCCATATCAGGAAGGTGATTTGGGGCATTTAACGAAAGAATCAGGGTTTCAGCGATTTTACTTTTGCCCCAAAAACCAATGTCAGCCCATGAATAAGTCATGATAGCTATATTGGAGAAACTTTATGTATCGTAATTCGCCACAATACCCTCACCGATATTCTTCACTCTCTCCACTAACTCCTGTGGCGATACTACCTTGACACCACTACCAAAACCAACAATCCAGCGCCACAAATCAAAATCCTCTAAAGTCCACTTGGGAAAGGTGGCTTGAAAACGATGGGGGAAATTGCGATCGCCTGTCCTCGTCAAGCAAAATAAAGACTTTGGTAAATTAGTCGTAGTCTTCTGCATCGGTGGTGACATCTTCATCTCGGC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCAACTTCCGAAGAAGTTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 72394-74851 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000019.1 Anabaena azotica FACHB-119 contig19, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 72394 37 100.0 33 ..................................... AACTAAAGTGCCGATTAACCCCTGCCCTGAAGC 72464 37 100.0 33 ..................................... ATTAAGAGCGTTGACCCTTGCCAAAGGAATACT 72534 37 100.0 35 ..................................... TCCACAAACACCGGATGATTTTCAGATTACGGAAG 72606 37 100.0 36 ..................................... TTAAGGCTAATTCCTTACGGTGCTTGAATAAATGTC 72679 37 100.0 33 ..................................... GCCATTAAAATGATGACTTGTACCATTTGGAAA 72749 37 100.0 35 ..................................... TTTCTAAGAATCCTTGTCCACCGTCTTTCTTAGAA 72821 37 100.0 36 ..................................... TCTAAATTCTTGAGATTTATTTTTAAAGGGCAATCC 72894 37 100.0 35 ..................................... GGCGCGGTAACACCTGGAACTGGAACTTTCACAAC 72966 37 100.0 34 ..................................... ACAGAATAAGAATTAATCAGGTCGCCCAAGTCAA 73037 37 100.0 37 ..................................... ACGATATCGCAGAACTGCGCCATTAAGCCATGACGTA 73111 37 100.0 34 ..................................... CAACCCCTACTTTCAATATTACGCCTAGAGCCAG 73182 37 100.0 34 ..................................... CCTTTTGATAAAATGCCAATACCAATTGATTCAG 73253 37 100.0 37 ..................................... ACGCAAGGTTTCTTGCCCTTGCCGTGTATCTGGTCAA 73327 37 100.0 34 ..................................... AAACCAATGCCCAGCGCTAGGCATAAGCGTCAAT 73398 37 100.0 32 ..................................... TTAATGGGCTGATTACAGAGCAGCAAGTAACT 73467 37 100.0 33 ..................................... GCGCATATTCTAAGACTTGATACTTGTTATACT 73537 37 100.0 35 ..................................... CTTATACTTGGCGATCGCATCTACTTTAGCTATGG 73609 37 100.0 35 ..................................... GGTATCGTACCACTGCGAAGATGAGTAATAGAAAT 73681 37 100.0 35 ..................................... TGCAAGTCTGAACAGAATCACAGACTTCTCTAAAG 73753 37 100.0 32 ..................................... CAAGTACCTCCTTCGCAACAACAGGAATTTTA 73822 37 100.0 34 ..................................... TTTCTTTTTCCTAGCAGTCGCGCATTCAGTATAT 73893 37 100.0 32 ..................................... TGGTATGGAATTGAGGGGCGAGGCGGGGTCGA 73962 37 100.0 33 ..................................... TTGAGAAGAAGGATCAAGTATGGATTCGTAAAC 74032 37 100.0 34 ..................................... TTGAATAATCCCCGCATTAGCAGAAATATCTAAA 74103 37 100.0 31 ..................................... AATACCCCAAGCAGTCAAGTCAGGGATTTCA 74171 37 100.0 35 ..................................... TTCAAAATATCTCAATAATCAATTATATTGATTAC 74243 37 100.0 35 ..................................... TCGTTTATCGAATTAATGGGCAAGACTCATCAAGG 74315 37 100.0 34 ..................................... CACTCATGATCATCATTAATCCAGGGGGGATTGA 74386 37 100.0 35 ..................................... TCCTAATGCTAAATTAGCTTGATAAACTCCATTAG 74458 37 100.0 35 ..................................... GGTGACGCGGGTGGAGGCGATCGCAACTCAGATGG 74530 37 100.0 33 ..................................... GCCAATATATACAAGCAGTGTTTAAATTCGTCG 74600 37 100.0 35 ..................................... GAGACACCTGGGATACTAATGGTGGGAATACCTAT 74672 37 100.0 34 ..................................... ACTGACTGGTACACCAATTAAAAACGGTAGACCA 74743 37 100.0 35 ..................................... CACAAAAATAAACCTAAAATTGTAGGCACACCAAA 74815 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 35 37 100.0 34 GTCTCTAATAACAATTAGGAGACGAATTAATGGAAAC # Left flank : ATAATTAATTGCTAAGGATGTATGCTGTAAAAATACTGTTTTATTTATTCCCTGTAATTGCTCTGGTTGACTGTGTTAAATGTAATGGTTGCATATGTGCCAAAATTTTCCCTCTGTTTTCATGCGAATGACGAGGGACTGCTGATTTTGCAATGTAGTCAACCAAAATCAGCACTAAGTCCCCTGGCGCATCCGTAGGTCTGGTAAGCTGTGATCAGCAAGTCACTATCTCGAACTTTAGCCACCCGCTTGCGTCAACCACTAGCTGTTTTTTTGAAGCAACCAAAATTTGAGGCTGTAACCTTTACCACGACTGCTTTTGAGCGATTTCACCTAAAAGTGAGGTTGGCGCAAAGCTTGTAATGCTTACTCTGTAAGCTTTTGGGGAATATTTACTCAACCACGAACTTGACAAGCAATGTCCCAAACGGTAGTTTTAAGAGAGGTTGACGCAAGTGGGTCTTTTAAGTCTTATTTTGTAAGGCTTTCAGATACCAGCA # Right flank : CTCAGCTTCCTTAACTAGCATCTGCCAGACTTCATCACGTCTCTAATAACAATAAGGTCTGTTAACTGACATCTTGCATCTTCTCAATAAGCTAGTGCCTCCCTGCACTGCCCACCCTACGAAATCATAAGTTTTCCTTACGTTCCTCACTGCGCGGAGGAGAAGTGTCGGCGATGCACTCCCCACCCTACGAAATAATAAGTTTTCCAGCCTGTTATTTTGTCAATAAGAGAATGGTGCAAGGTACAGCACATTTCATCTGAGTGAGGTACACAAGGGCGGGCAAGATGCCCACCCCACAAGAATTTTATAATTTATATCTGTACCTCATTTAGCTGCAACTTGCTGTATAAGTTATCTCCCCCCACTTCCCACTACTCTCAACGCGGCGATAATCTCACTATTTGCTTCTGGAAATGTAAACTGGTCTAGTTCATCTAAATTTACCCAGCGAACTTCGGCACATTCTAGAGGTTGAGGAATACCTTGAAGCCAGCGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTAATAACAATTAGGAGACGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 71254-74048 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000009.1 Anabaena azotica FACHB-119 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================================================================================================================ ================== 71254 37 100.0 35 ..................................... CTACGATTGAGTTTGACTTGCAAAGCCCGTTTAGT 71326 37 100.0 37 ..................................... TTTCTCCCATTCCTTCGGATCAATGGCTGAGGGTAGG 71400 37 100.0 38 ..................................... ATTGAGTTTTGGGCTTTGATGGGGGGCTAACGCTGGAA 71475 37 100.0 37 ..................................... GCTTGGGATACAGCCTCGCCAGCTTTACCTATGGCTC 71549 37 100.0 39 ..................................... TTTGCGTTGGCGCAAAACTTCAAAGGCACAATCACAGAA 71625 37 100.0 35 ..................................... ATGAGCTTTTGATTACTTGTCCCAATCAGAATTTG 71697 37 100.0 38 ..................................... AACTACATCTCCTTGGAAATATTTTTCAATTGATTGCA 71772 37 100.0 36 ..................................... TTCATTACTTAAATCGCGGTAAGCAGCTCTGAGGAT 71845 37 100.0 37 ..................................... GTCCGTCGTCATCTGTTAGAGTTCCTTGAAAGTTATC 71919 37 100.0 42 ..................................... AACCCAAGTTCAGCCAAGTGCGTGGACGCAACTCCAACCCAG 71998 37 100.0 34 ..................................... ATAATGGGAAGCGCGATCGCAATTCGGCTGATGT 72069 37 100.0 220 ..................................... TTTTCCAAAATATTCTTAGGACTTACGCATTGACAGAGAAGCCAAAATAACAGGTATAGTTTTCAAGGCTTAGAGCTAAATTCTTCCACAATATTTTGGCGATCACAAGCAATCAAGTGTGATTGACAAAAGCCTGAAACAACCTATTTACTGTGATACACAAGATAGTTATTTTGTACAGTGCGTAAGTCCTAATTCTTTAAATATTGAACCTGAAATT 72326 37 100.0 36 ..................................... GCGCCATTTACCCAAGTTCTAGCCAATGGCGTGATG 72399 37 100.0 38 ..................................... AAAGGATGATCTTCATCTACTAACGCAAGAGATCCCAA 72474 37 100.0 36 ..................................... AGCCAGTGTTTTTCATTAACAATTGCTCATATTTAC 72547 37 100.0 36 ..................................... CTTCTATTACTTCTATTGTTACTCAAAATGCCCAAG 72620 37 100.0 34 ..................................... TGCCGTAATCGGCATATATCCAATCTTTTTTCAA 72691 37 100.0 37 ..................................... GCGAGATTGATATTACAATCAATTCAGCGATCGCCAA 72765 37 100.0 39 ..................................... ATTGGCGTAACTTCTTTCATCAACACTTTTTCGCATCAA 72841 37 100.0 35 ..................................... AAGTCGTAAGGATAAAATTTTCTTGAATACATAAT 72913 37 100.0 36 ..................................... AATTCAACGTTTGCGTTGTTGAATAAGCCTGTAAAA 72986 37 100.0 37 ..................................... CTCCTGGGAACAATCTGTGTTGGGGAGACTTTTTAAC 73060 37 100.0 36 ..................................... GTTGATTTATTTAAGGAGTTTGTAAAATGACTGTAT 73133 37 100.0 34 ..................................... AAAAGGTAATGATTGTACCAATTCGCCTAAATCG 73204 37 100.0 35 ..................................... TACGGGGATAACTAGGAATAATCAGATTAGTTTGG 73276 37 100.0 36 ..................................... ATCAGTTACCTTTTTATTGGTATCTGATATTTTTTT 73349 37 100.0 36 ..................................... TCGTCAATACCGAATTGAGCCACTAACCTATTAGTT 73422 37 100.0 38 ..................................... TAATTAAGAAAGATAAGATTAAAAAAGTTATGTTGGCA 73497 37 100.0 35 ..................................... AGTTTCGTAGCTGCCACCACGACAACTCATTCTTT 73569 37 100.0 35 ..................................... AATGCCGTTTGCAATTCCTGCCAAGTTAAATCTGT 73641 37 100.0 35 ..................................... ATAAACCGAAGTGTCCTCAGTCGCATAAGAGATGA 73713 37 100.0 36 ..................................... ATTGTGCCGTTGTTCTGAAGCTCACACTCCCCCAAA 73786 37 97.3 38 ..........T.......................... AACTTTACTATCAGGGAAATGGGTAAGTTTACTTATGC 73861 37 94.6 35 ................C.............C...... GCTGTTAAAATTATATAAATCCTTTTTTTGTGGTG 73933 37 83.8 42 .....T.....T.............A..A.C.....G ATATCAGTTTTTGTGCTGCATCTTTTGGAGTCGTCCTTGCAA 74012 37 70.3 0 ...GTT.....TC..A.A..T.....A....GA.... | ========== ====== ====== ====== ===================================== ============================================================================================================================================================================================================================ ================== 36 37 98.5 42 GTTTCCATCAACTAATTCCCCTCACGGGGATTGAAAC # Left flank : TGGTGTATTACAACTTACACCTTTTATTGATATAGGTACAGGTTGGAATTACAAGGGACAAAACCCATCACCGGATACTTTGGTAGGTACAGGTTTAGGGTTACTATGGAGACAGGGTGATAACTTTTGGGCGAGGTTAGATTGGGGAATTCCCTTGACATCAGTAGAAGGCGAGAAGCGATCGCTCCAAGAAAATGGACTGTATTTTTCCATCCGATACTCACCTTTCTAAGATTACACTTCCCAAAACACTCGACAATATTAGATACTCATATTATGATTAAGTCACCAATTTGATGTTTGGCAAGTCGAAGCGGGCGCAAAAACCCTGGAGACCCGCCAAAATCCCCAGAACCTTGACAACATAATAATTACAGCGTTTCCATAATTAGGGAAGTTGCAAATTATTTGCAATAAGCGCGGCTGAAAATGACCATTATTTTCCACCCGCCAAATCGCTTCCCAGGAACCTTGCTCTAGTTAAGTTTCAGTACTGAGCA # Right flank : CATAAAAAAATTATTAACAAAGGAATCAAAGTTGTTCACATAGAAGCAGTAAAACCTAACAGAGGCGAGAGGCTAGAGACTAGAGGTTAGAACATTCTCATCCATAGGGAAAGAACAGTATCTAGCAAATTTTTATGTAAATATTTCTGAATAAACAAACCATTATCTGATTTGCTCAGGCATACTTTAACAAGTAGGCATAAAAAAATCTCTTTATAGAGGTTATTTTATCCACTAATCTTTTGAAAAAATTTAGAAACTAAATATTGTGAAATAAAACTAAAAATGTCCACAACCAAAATATAGTTGTTATTTCAATTATTTAATGTATAAATAATTGAACTAGGTGGGCATGAATAATTGACCAGTTTTGAAAATGATTTCGCAATATATTTAAAATACTAACTTTTTTCAAGAGTTAAAAAATCATTAACTTTTTCTGCGGTCAATACGCTTTTGAAAGCTGAAAAGGAGTGAAGTTTTTGTTTTGCTGAGACTGA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCAACTAATTCCCCTCACGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 2 95078-87180 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000009.1 Anabaena azotica FACHB-119 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 95077 37 100.0 34 ..................................... ATACAGCGATCGCTCAATTACTTTTGTCTTCAAG 95006 37 100.0 38 ..................................... CTCTTCCCTGTTAGGCGCTTTATGTGCGTCTTTTATTT 94931 37 100.0 37 ..................................... AAAATAAAAATACCAAGCGTAAGCGATCGCCGGAAAT 94857 37 100.0 35 ..................................... TGTCAAGATTACCATCGTGATCATAATATTTACTC 94785 37 100.0 37 ..................................... TACTAGCCTCATCCTGACTGAACACCACGAATAACTG 94711 37 100.0 32 ..................................... ATTTAGAAGCCAGTCCCAACGCATTGTTTGAA 94642 37 100.0 39 ..................................... TTTTAAGTTCGGCTTGTATGCGCCGTAGTTCTTCTCTGA 94566 37 100.0 38 ..................................... AGTGGATGTAAAATGATTCCATTGCGACTCAGGACAAA 94491 37 100.0 40 ..................................... AACTTTTGGAACATTCGCCACATTACCGTTTGACATGGCA 94414 37 100.0 37 ..................................... TAACGGTTGATGTCCTCACTTAATCGCTGAATCTCCT 94340 37 100.0 38 ..................................... AGCAATCTGCTCAAGAATTTGCCAACATCAACTTCAAG 94265 37 100.0 38 ..................................... GGAATATGATTATCTACGCCCGTCCGCCGTAATCTTAC 94190 37 100.0 36 ..................................... CAACCATTTCCACAGAAAACCCCCCAGTCCGGGCTA 94117 37 100.0 36 ..................................... AGTGACGGTTCGAGTGACGGTTCGAGTGACGGTTCA 94044 37 100.0 37 ..................................... AAAAGATATTTGATACCCTTCTTTCCTAAAATTATTA 93970 37 100.0 35 ..................................... CTCCTTAATACAGTAATACAGTAATAATCCAACTT 93898 37 100.0 36 ..................................... ATACTCTATAGCCAAGTCATGATACATCTGTTTAAG 93825 37 100.0 34 ..................................... AGTGCTGACCAGATGCAACCGGGGATGACTATTG 93754 37 100.0 34 ..................................... TTCAATTACTCTTAAACCCGTAAAAGAGCTTTAC 93683 37 100.0 34 ..................................... CAACCGGCTAGCAAGCAAGAAGTAGACAAACTAA 93612 37 100.0 37 ..................................... GGCAGTGCCAAGATTTCACTCATTTAGAGAACCTCTG 93538 37 100.0 34 ..................................... GGTTACTGGACATTTTGAGCTACGATGAAGTAAA 93467 37 100.0 38 ..................................... ACAACTTCTATTGCTTCTAGTCCTTGCGTGACTACGTT 93392 37 100.0 37 ..................................... ATTACTTGTAGGGAGTAATCAAGTTTGTTCATCAAGA 93318 37 100.0 37 ..................................... TCCAGTCGTCATCGTCTCCCCTTGGTGTTCCCCCGGC 93244 37 100.0 37 ..................................... ATTTGATATCCCAAATATTTGGCATTTGATAAAGCTA 93170 37 100.0 40 ..................................... CTCTTTGCTAATTTCGTTGTGTAATTTGGATTCGGAGGGA 93093 37 100.0 38 ..................................... AACATGGGATTTAAATCATCGGCGGATTTGTTCATAGT 93018 37 100.0 38 ..................................... ACATGAGAAGTAAAAGTCGATGTGGACAAGCCGCCGTT 92943 37 100.0 40 ..................................... ATTTCATTTATCAGCGACTTACGAAAACATCCCAACCTGA 92866 37 100.0 41 ..................................... ATAGGCATTGCGAGACGCTATCAACTCAACAATAGCTTGAG 92788 37 100.0 36 ..................................... ATTAGCCGTATTTTCAGCATTAAATGCCTTAGTAAG 92715 37 100.0 37 ..................................... ATGATTATTGATCTACCATCACTTGAACTTAAAGGAA 92641 37 100.0 39 ..................................... CCAATCACTCCCATCTCCCCTTGGCGTTCCGCCAGATGG 92565 37 100.0 37 ..................................... GTGATAACTATGCTTGGGAGGAAGAAGACAGCGCTTA 92491 37 100.0 37 ..................................... ATTCGTGCGCTCTCAAGTTCGGGTTCACAGGATGGCA 92417 37 100.0 35 ..................................... TGAGGAACAGATTGCAAGGGGCAGATGCTGGGCCT 92345 37 100.0 38 ..................................... TATGAAATTTTTCAAATTCTTCGTGTTGGGGACTGGGG 92270 37 100.0 33 ..................................... TCCCGATTTAGTGCCAATGCTGAAGGGGATGAG 92200 37 100.0 37 ..................................... ATCGCCAAATATTGACCCCACTGCACCCCCCAGGCAG 92126 37 100.0 38 ..................................... AGTTGCAGCTAGCCTGCCTGTTGTTTTAGGGAAAACTG 92051 37 100.0 35 ..................................... GATTCTTCTGCGTTTTTCTCTTCTAAAATTTCTTC 91979 37 100.0 36 ..................................... AAAGCGAGGGTTGCTATCTTGATTTACTCGCGCAAA 91906 37 100.0 36 ..................................... TGAAGCGAAAGTTACCAATAAATTTTTCGGAGCCAA 91833 37 100.0 36 ..................................... GCTCTAGCCAACTACCGTCATACTGACGCGGGGCAA 91760 37 100.0 33 ..................................... GACAAATAATCAGAAGCACTTCACGCGCCTTAA 91690 37 100.0 35 ..................................... AATTGATTCTACTACTACAGTTGGCGGCCACCGTC 91618 37 100.0 36 ..................................... TTCAGGAGGAAATCTAGAGATTAAACTTTTGATTTG 91545 37 100.0 34 ..................................... ACTTCCTATCTTCCATAAATCGTTAGCAGTGTTA 91474 37 100.0 38 ..................................... AAACTATAGCGCTTTACTTCGTTATAATTTCCGGGTTG 91399 37 100.0 34 ..................................... AGACACTTTAAGGACCAGCCAAAATAGGTTTCTC 91328 37 100.0 35 ..................................... GCTTCCGTTGGTCTAGGCATAGGGCAGGAAATTTA 91256 37 100.0 35 ..................................... TTTTCTGATAAATTATCCTTATTGCTAGATTCCCA 91184 37 100.0 36 ..................................... AATAATCTACGGCAGTTTGCAGCGTTCGCCCTTGTG 91111 37 100.0 40 ..................................... TTTATTGTTGTCCAATTTTGAACGCCAAATAACCCTTTGA 91034 37 100.0 37 ..................................... GGATCACTTGTTCATGAGACTTTACCGTGCCAGCGTT 90960 37 100.0 35 ..................................... ATTCTGGCATCTCTCAAGCACACAAATCAGTCTTA 90888 37 100.0 38 ..................................... AGGCACAATATAAGGCAACCACGGAAGCCTGGAATAGA 90813 37 100.0 35 ..................................... ATCGCGATTACTCCCTACTCTCAACTAATGCCTAA 90741 37 100.0 38 ..................................... GTCGTCTCTAGCGGTAGCCGTCAGAGATTGTCCCGCAA 90666 37 100.0 36 ..................................... AAGCCGGCGCGTTCGCCGGGGTTGCACAGGTCACGT 90593 37 67.6 36 ......................A.CTCTTCC.CCTC. GGGGTTCCATGAACCGCCAGGTTGCACAGGTCACGT 90520 37 100.0 38 ..................................... TATCTCAAGCTGAGATTGAATTATGGGCTAAATCACTC 90445 37 100.0 34 ..................................... GATTCTTACTTGGATACCAATATTCAATCATCTT 90374 37 100.0 38 ..................................... TTACCTTCACCGTAATGCCATTGTGAACCGTTGCCATA 90299 37 100.0 37 ..................................... AATTCCTCAAACTTCTTTCTAAAGTTGGAAGTTGCTT 90225 37 100.0 34 ..................................... CGGAAAAGCTAGAAAAGTAGCCTTCCTTCAAAGT 90154 37 100.0 37 ..................................... AATATTGCATTTAGCAAGAAAACACTTTTCACCTACC 90080 37 100.0 46 ..................................... CGCTCGATTGCATCGACTCGCGCCCCCAACGCTTCAGCTAGCCCAA 89997 37 100.0 37 ..................................... AAGTACAAACAAAACCTAGAAAAATAAACTAAACTTA 89923 37 100.0 35 ..................................... AGTTGCAGGGATTGACCGGAGGCAACTGCATTGTA 89851 37 100.0 36 ..................................... GCATCTGATTCAGTTTCAAGGATTGAGTAGGGCAGA 89778 37 100.0 37 ..................................... AGATGAGCTTGAGTCCCTCCGCACACTGGAAGTGGAA 89704 37 100.0 36 ..................................... GTCTGAGTTTCGACCCAATGCGCGGATCGTGAAAGA 89631 37 100.0 35 ..................................... TCAATAAAAATGCTTGTTTCCCTTAATGATAGCAC 89559 37 100.0 37 ..................................... ATTGAAATTTCACAGCGTGACATCCGTAACAAAAACA 89485 37 100.0 35 ..................................... ATCGCCACACCCTACTCAACAAATTCCCCGATATT 89413 37 100.0 38 ..................................... AGTTCTAATTGTTTGGGGGTCATGCAAAAGATCCTCTA 89338 37 100.0 35 ..................................... TTACCACTACTAGACAAGCATTCTATAGCCAACTT 89266 37 100.0 38 ..................................... TCCCTAATTTTGTTGATTGGGAAACCGAAGCTGGGCAG 89191 37 100.0 35 ..................................... AAAGCAAAGCGGTGGCGCTAGAGTTGGCGCTGGGA 89119 37 100.0 36 ..................................... CAGCCCCTATAGCCTTAACTTTTATGATCGAATCAA 89046 37 100.0 33 ..................................... CAGAATGATATTTCTGCTAGTGTAGCTAAGAAA 88976 37 100.0 37 ..................................... ATTAATCAAACTAAAAGCATCCAAATACTATGGAATG 88902 37 100.0 36 ..................................... AATTAGACAGTACCACTACCATCCCATCATATTTAA 88829 37 100.0 32 ..................................... GGTTCCAACTGTCCCAAGAGTTTTGTTTTTAG 88760 37 100.0 33 ..................................... GACGATGAGAACGCTTACGCTTTGGGTGTCGCC 88690 37 100.0 36 ..................................... CATCAAGTGGTCGAATCTTCCGCCCCACTCCCTCCC 88617 37 100.0 36 ..................................... TTTTTTGGTCAAGCTCCAGGCTTTGAGTAATGCTTC 88544 37 100.0 36 ..................................... TTTAATTTGTCCCATGTGCTTATTTCATCTAAAAAG 88471 37 100.0 38 ..................................... TATAAACTTAGATTCACTATCAACCAATAGTACTGAAG 88396 37 100.0 35 ..................................... AATAATTTCAAAATGCAATAATTCGACGTTAAACC 88324 37 100.0 39 ..................................... ATTCTATCAGTTAAATCATTATCCTTATTCTTATTATTA 88248 37 100.0 37 ..................................... ATTAAATTACTACGTCCATAACCCATTCCTTCGTAAA 88174 37 100.0 38 ..................................... CAGAACGGATTAAAACAAAACAATTTGTAGAGATAGAC 88099 37 100.0 38 ..................................... GCACTGGCAGAAGATACACAGCCGCCGACTAATCCTTT 88024 37 100.0 37 ..................................... TTGTCCATGTCTTTGGATTCGAGGACGGCAAATTAGG 87950 37 100.0 35 ..................................... TACCACTTGCCCTTGGCTTCTTCGCTATTAACAAT 87878 37 100.0 38 ..................................... TAATATTCAGCAGTGCTATCGAAACAGATTTGCGTGTC 87803 37 100.0 35 ..................................... AAAGCTGTAGGAATTGCCGTAGTGCTTAACTCGTT 87731 37 100.0 37 ..................................... GAAACGCGATCGCACTTGAGCGAATAAGCAAGTTAGC 87657 37 100.0 33 ..................................... GTGCCAGATTGCAAAAGCTTAAATTTTGCAGAA 87587 37 100.0 37 ..................................... AGTCATAATGATATTCCCTCAAAAAATCACCAGCGCA 87513 37 100.0 37 ..................................... AAAATGGCTCTAGCCCAGCCTCAACACCACGCTTTTG 87439 37 100.0 35 ..................................... AACTTGCCCTCAACCGTTCCCCAGGACTCACTCGC 87367 37 100.0 33 ..................................... TGTTCATATCGTGCTTGTTTAAAAGTAATTTGG 87297 37 100.0 44 ..................................... GAGATGGCAGCCTACGGTCATTGAGACATAGAAAGACCTGCTAG 87216 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 108 37 99.7 36 CTTTCAATTAAATGAAACCCGTTCGCGGGATTGAAAC # Left flank : GATGACTACTTTGTTGTACCTGATAATTTATGATTTGCCCGATAATAAAAAGGCGAATAAGCGGCGAACCAAGCTACATAAAATGCTCTCTGGCTATGGAAAATGGACACAGTACAGCGTGTTTGAATGTTTTTTAAATGCTGTGCAGTTTGCTAAATTAAAGGTGCAGATGGAAAATTTGATTAAACCCTCTGAAGATTCCATCCGTATCTATGTTTTGGATGCTGGAGCAGTACGTAAAACTATCACCTACGGTTCTGAGCAACCTCGACAAGAACAGACAATAATACTATGATGCTAGTAGCATTTTTTGGCATGGGAAAGCACGGGCGAAAACCCCCCACCTCCCGCCAAATCGACAGAACCTTGACAATTCAATACTTCTAGCGTTTTAAGTACCAACATAGAGCTTAGTTACAAGTGCCGGAAACGGACTTTTAAAGTAGCCCCGCCAAAAATGGTCTTGGGAATGGCTCTATCACTCGCCTCTGGCTGGCGGA # Right flank : GTAAAATATTTAAGTAAAAAATAAAATGATTATAGTCCAATACGGTTTAGATAAGAATAATTAACCGCCGATAAACGCCGATGAATTTAGATATTTAGTTAATGTTTCTGCCCAATTTAGCCTTAACTGAACCGTATTGGATTATGGTCTTTCAAATAATCCTTAATTGCCAGACTCTTAACTGAGAGAATTGACTAATGCCTTGGCAACAGCTTTGGCAGATTGAGGATTTTGTCCAGTGATCAGGCGATCGCTCACTTCGATATGGGGTATAAAAGGTACTATCCCTCTTTTATATATAGCCCCTTGCTTTTTCAATTCATCCTCCAAAAGATAGGGAACAGCCTCCACCAAACGAATCAACTTTTCCTCTAGGTTGGCGAATCCTGTTACCGTTTTTCCATCTAATAAATAGCGTCCATCAGCCAGCTTAATATTAAGCAGTCCGGCTGAACCATGACACACGGCTGAGATAAAACCACCGTTTTCATAGATTTGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAATTAAATGAAACCCGTTCGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 106888-110442 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000009.1 Anabaena azotica FACHB-119 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 106888 37 100.0 36 ..................................... AAATCTGTACTGATAACGCTACCTTAACACCTTATG 106961 37 100.0 36 ..................................... AACGTATTATACTTATATCAGAAATTAAGTGCTTTG 107034 37 100.0 33 ..................................... GAACGCACAAAACTATCGAAATCTAGGAACAAA 107104 37 100.0 36 ..................................... TAACAAAGAAATATTGGGTGTTAACGATGTAGTCGA 107177 37 100.0 35 ..................................... ATGACTTAAAACAAACAGAAAAAAATGTAGCCTTT 107249 37 100.0 34 ..................................... CGTGAAGAAGCAGTAAGGCCAGCGACACCGATCG 107320 37 100.0 38 ..................................... CAGAAAAAATTACAGAGGCAGGAGAATTTCTAATTAAG 107395 37 100.0 35 ..................................... CTCAATATAATTATTTTGGCAATTTAACCCCGTGT 107467 37 100.0 34 ..................................... GAGTAAAATGATAGATGCAGTCAAAAGTTTTCAA 107538 37 100.0 39 ..................................... GTCCTATTTACAAGTCGTCAGGCTATCGTGATCCTATCA 107614 37 100.0 37 ..................................... GCGGCGATAAGAGGGACACTACCTATAGCTTCTTTGC 107688 37 100.0 38 ..................................... AAGAAGATCCTTTTATTATATTGCAAGCGCCAAAGGAG 107763 37 100.0 34 ..................................... ATTTTGGCTGTACTCGGCTTAGTTGTGCCTAACG 107834 37 100.0 37 ..................................... ACAGTTAGTTATCGAAGCAACCTCCATCCATTCACCA 107908 37 100.0 33 ..................................... ATCCCGTTCTTGGGTCTGTAGGAATGTAGATCA 107978 37 100.0 35 ..................................... AACATTACCCGCATCGGAATAGTGAAAGTTATCGT 108050 37 100.0 37 ..................................... TTTTGTGCTTTGGTTGCGTTGTTGTTTCTGTCATTGT 108124 37 100.0 36 ..................................... ACAGTCCCTACCCCAATTAACTTCTTATAGTGACTA 108197 37 100.0 37 ..................................... GGCTGATATTTGCAGATTCATTGTTACTAGTGGATGA 108271 37 100.0 38 ..................................... ATCAGGCTCAGGATGAGGTCTGTTGCATCCAACCTCAC 108346 37 100.0 37 ..................................... AAGTCATTTTTGGAGAAGAATGATCCTACTCCGTTGA 108420 37 100.0 36 ..................................... ATTCGTTACCAATAACAAAAAACCAATTCCAGGCAG 108493 37 100.0 37 ..................................... TTGCAATTGGAATTGCATTTAATGGTTATCCTTGGAA 108567 37 100.0 37 ..................................... CAAAACCCTCACACTGAAGACCTTGGACTAAATGGGG 108641 37 100.0 36 ..................................... TGGGGCATTGCGCGATTCCTTGAATTGTGATTTCAA 108714 37 100.0 38 ..................................... AAATTCCTATTAATTGTCCAACGCCAAACGCAGCGACA 108789 37 100.0 36 ..................................... CTTACACTACCGCCCGACTCGCTTCTTTTCGGGCGG 108862 37 100.0 33 ..................................... AATCTACACTAGTGCCAAACCGCGCCTCACAAG 108932 37 100.0 39 ..................................... GGTTAAACCAGAACCTTGACCCGCGCCTACACCTGTCCT 109008 37 100.0 37 ..................................... ATATTATCAACGCTGCTAATGCTGCTGCTAATGCTGA 109082 37 100.0 38 ..................................... GAAACCAGAGTTATACAAGTAATCAAACAGTACAGTTG 109157 37 100.0 37 ..................................... CTGTGATCCAGCGTTATTACTGCCAAACTTGTAGAAA 109231 37 100.0 37 ..................................... AAAAAGGATAACACCCAGGCAGCCAAAACCCACACTC 109305 37 100.0 33 ..................................... TACTTCGGTCAGAATCATTAAAAATGATTTTAA 109375 37 100.0 37 ..................................... AAGACATGACTCTTCTTTATGATCGCGAAGTCTTTGA 109449 37 100.0 37 ..................................... ACCAATAACGCAAGCAATACTGCGCTTCCACGCTTGA 109523 37 100.0 35 ..................................... AAGACGGGATAACTACTACTGTAGTAGTACAAGTC 109595 37 100.0 37 ..................................... TGAGTTTAAAGCGTTCTGGCTCTAGCCGTACTAGGTT 109669 37 100.0 33 ..................................... CAAGCATTCCAGCCCGCATCAAGCGCATCGTAA 109739 37 100.0 38 ..................................... ACAACGACGACTGGAGTGATAGCGACGCTGGCGCACAA 109814 37 100.0 39 ..................................... AAGTACTTGGCTGGTTTCCGGGGATTGGGGATTGGGGAG 109890 37 100.0 37 ..................................... TTTGGTTAGCAAGCCTTTAAAATAAGGCTTCAGAAAA 109964 37 100.0 39 ..................................... TCCAGGGGCAACAAAGGCTTACCAGTGATGAGGTTACGG 110040 37 100.0 37 ..................................... GATATCAATTACTAAAAAGGAATATCATCATCATCTA 110114 37 100.0 37 ..................................... TAATTTCTATGGGGCGATCGCAGTATGGGTTTTCATA 110188 37 100.0 35 ..................................... ATGAGGTCGTAAAGTATCCAAACTGGATCGGCAAC 110260 37 100.0 36 ..................................... TTCTCTGTGAGTGGCGATCGCTTTCTCTGCCCAAGG 110333 37 100.0 37 ..................................... ATTGGATCATTATCTTTGTGTATACATATTCTTCTTC 110407 36 86.5 0 ............................-..A.G.GA | ========== ====== ====== ====== ===================================== ======================================= ================== 49 37 99.7 36 GTTTCATATTAATGATTTCCGCTTGCGGAATTGAAAC # Left flank : TTTCGGGAAATCGAGGCAACTATAGATTATTGGTTTTGGTTTAGGCAGCGTATGCTGAAATATGGAGCCAATGTGAGGATTTTAAGTCCGAAAATTTTAGCTGATGAGATGAAAAAAGAGTATAAAATGATATGGGAACAATTCTCAGCAGATGAAAGTACTAACCTTCAAAGTTAAGAAATGCTCTCATCGATTCTAAAATATGATATTTTAAGGCGGTGAGTGTCAAGCCTCCCATTGTTGAACTTACTAACTTGTTTTTTGGTAAGTCTGTACCTTGAAAATTGAAGATATGTATTATTTTCTAGATTTTGGCAGGGCAAAGCACAGGCGAAAACCCCCCACCTCCCGCCAAAAGTCTGAAACCCTTGCTCTATAAGGAATATAGCTTACAAGCACAGTCAGCTTATACTCGCTTTAGAGGCTGAAATGAGGTTTTCTAGCTTCCCCGCCAAAAATGGTCGTGGAAACCAGGATTATCAAACGCTTCCAACTGCCGG # Right flank : AGGGAGGAGAAACGAAAACCTCACCCTCTTACTCCCCTCTCCTCGTAGGAGAGGGGTTGGGGGAGAGGTCAAAACAACGCTGGTCGAACTCACGTTAAATTAAGGTTAGCCCACATAGGTAAAATAACTAGCGTCCAGACTCAAATTATTGTCACCTTGGACAATAGCAATTAGTTCATTCTGCGCCCCATCAGGCATAGTCAAATAAATGCCGATACCGGATGGTAAACCATCACCAGATGAACCTAAAACATAATCGTTGATTGTTCCGGCAAGCTGGATGCTATCTTGAGTGGAGTTAAAGTCAGTAATCAGCGCATAGTCATTGTTGCCTTGGGTGACTAATTGACCATTATAGTCACGGTTACGACTGCCATAAAAACTATCAATGTTACCAACATAATTTAAACCGCCCTCTCCCAGGACGAATGTATCACTGCCTTCACCACCAGTTAAAGTATCGATTTCTCCAGCACCATAAATAATAAATTCAATAGGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATATTAATGATTTCCGCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.80,-4.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 9293-5976 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000022.1 Anabaena azotica FACHB-119 contig22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 9292 37 89.2 36 T............C..........G...........T AGATGTGTATCCAAACGCTACAACAATTGACCCAGA 9219 37 97.3 17 ........................G............ ACGATGATGATGACTAT Deletion [9166] 9165 37 91.9 35 ............A...........G...A........ CTTAGAGGAAAAGGTAATGGTTGCTGCAATGCGGT 9093 37 94.6 36 .......C................G............ TAGTTAGAGAATATGGTGAATATGTAGATATTGAAT 9020 37 97.3 38 .............................G....... TTGGTGCAGGGAAGCGACGGCAGAATTTACAAAGCTTC 8945 37 97.3 37 .............................G....... GAAAAAATTCTCAATAAGCAGATCCAAGTCTATGTGA 8871 37 94.6 34 ............T................G....... TGGCACTTATCTTTGTACGCAAGCAGAGTATCAA 8800 37 97.3 36 .............................G....... AACAGAGTTAATCAGCGAAATAAGTCTTACAAGTAT 8727 37 97.3 36 .............................G....... TCTCCAACAAATTGCCATCAACTCAATGAACGACTT 8654 37 97.3 35 .............................G....... TTGCACTTTATAGCGGATAGGCTGAAAATATAGCG 8582 37 94.6 37 .....G.......................G....... TAATCCTTAAAACCAATGGTGCAAAATTTTGCCTGCT 8508 37 97.3 36 .............................G....... CAGCTTTTATTGGCTGGGTTTCTGTGACGGGATCTG 8435 37 100.0 36 ..................................... GTTGTATTATGCAGAGTTTTCTGCTCAATGCTTGCA 8362 37 100.0 34 ..................................... TTGAGTTCATTTGGCAGTTTGCTCAGGATGAAAT 8291 37 100.0 38 ..................................... TTCTTCGTCAGAGCCAAGTCTAGCTAAAGCTTCAAGTT 8216 37 100.0 40 ..................................... TACAGGATAGAAATGTACTTCTTGCCGTAAACTCTAACCT 8139 37 100.0 36 ..................................... AAGGGTGGGGCAAGAAAAGAACATTGGTATGATTGC 8066 37 100.0 36 ..................................... TACGATTATTTCTCTATTACATCGTATTAAGAAAAG 7993 37 100.0 38 ..................................... TTCTGTCTCGTTCCAAGTCGTAGATCGCTTTCTGGATG 7918 37 100.0 36 ..................................... TCCAGTGGGTAGCTTGTTAATCGCTCGGAGTTTCAT 7845 37 100.0 33 ..................................... TGAAAATCTGATTAATGAACTTCAGGATTGGTT 7775 37 100.0 36 ..................................... TCAATCCGCTCAAGCTTTGCCCATAGTGTTGGCCAC 7702 37 100.0 35 ..................................... TCGTTAAGATGTTTAGAGAAGCGGAAAAGCTGAAT 7630 37 100.0 39 ..................................... TCCTGGTTGTCCAGGTACTTGTACTACTACAGTAGTAGT 7554 37 100.0 38 ..................................... TCGATGGGAATATTTTTAGGAATATTAGTTAGTATTAT 7479 37 100.0 40 ..................................... CTGAGGATGGAAGAGACAGCGATCGCTTGTAAATCCGGCC 7402 37 100.0 42 ..................................... CCTGCATATCCTTAGCGAACAGTACGACTACGATGGTACTCT 7323 37 100.0 34 ..................................... GCAAAACGCTCATGGTCAAAATTGGTATGTAGCT 7252 37 100.0 36 ..................................... TTTCCAGCCTCAAACAGATACAGAGGCGAAATACTG 7179 37 100.0 35 ..................................... GAAAAATCCGTCTGACGTTTGACGTTTACTTTTTT 7107 37 100.0 36 ..................................... TCATCAACAGGCTTTCGCTTTGCTATTTGTTCCCTT 7034 37 100.0 36 ..................................... AATCAGAGCTTGAGCGACTAAAGGAAGGACTAGAAA 6961 37 100.0 36 ..................................... CGACATTAACAGCGTCCTCGCCAAACAACTTGGCAT 6888 37 100.0 35 ..................................... CTCCTTATCGCCGCTACTAAACTCATCCTTAGCCA 6816 37 100.0 37 ..................................... AAAGATGTATCTAATTTGATTATCAAATCCAAAAATG 6742 37 100.0 35 ..................................... CTGCATGGGAGTGCAGCCCATCACTATCGGTGGAG 6670 37 100.0 37 ..................................... CTGATAATGGGATAGATATTGTCAAAGATGAATGCAA 6596 37 100.0 38 ..................................... TTCAAAGCCGTGAAAAAGCAATTGGCAGGAAAAGAATT 6521 37 100.0 35 ..................................... CAAATTGATCCAACCTTGCAACGCAAGTTGGATCA 6449 37 100.0 35 ..................................... TTATGAGTGCGATCCTCTTTAATTCCTGATTTAAT 6377 37 100.0 38 ..................................... TTATTCTGAAGCAGAAGTAGCTTTATTTATGTACTTAG 6302 37 100.0 35 ..................................... TAATTGAGTAGTCATAATAAAATTCACGTTATTTT 6230 37 100.0 37 ..................................... TCTGCAGCATCTGAGCGCGCAGGAATTGTAACTGCTC 6156 37 100.0 34 ..................................... TGTCATCGTTGCTGCTGTCGTTGTGAACTTCTTC 6085 37 100.0 36 ..................................... TCTATAATCAGCTATGGCGACCAGAAGAATGCGGCA 6012 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 46 37 98.8 36 GTTTCAGTCCCCGTGAGGGGAATTAGTTGATGGAAAC # Left flank : TTTTGCTTTATCTAGTATGTATTTATTTGTGGGTATTAGCTTGGGAATTATGCTAGCAACTGTCAGCAGTTCCCAACAACAGGTAGTTTTAACATCTTTCTTTATCAATTTACCAATGGTACAAACTTCTGGAGCGATCGCACCAATTGAATCTATGCCTCCTTTGTTTCAATTCTTATCTCTATTTAATCCCCTGTGCCATTATGTTGCGATCGTTCGGGGTATTTTGCTCAAAGGCGTTGGTTTAGATGTTCTTTGGATGAATGCTTTAGCTTTAGTCGCCTTTGCTGTTGTTTTATTAACTATTAGTATTAATAAATTTCGTAATCAGTTAAGTTAAAATTTCCGACTCCCCAATACTCAACGCCTTTGGTGTCACAACCATCACTCTTATTGACAAAATAACAGCTTGGAAAACCGATTATTTCGTAGGGTGGGGAGTGCATCGCCATCTGCTTATTGAGAAGGTGCAGGATATAAAATCAACTAATTCCTCAAAC # Right flank : TGCTCAGTGCTGAAACATAACTAGAGCAAGCTTCCTGGGAAGCGATTTGGCGGGTGGAAAATAAAGGTCATTTTCAGCCGCTCTTATTGCCAGTAATTTGCAACTTCCCTGACTTGTGAAACGCTGTAATTATTATGTTGTCAAGGTTCTGGCGATTTTGGCGTATCCCCAGGGTTTTTGACCCTGCTTTGACCTGCCAAACATCAAGCTAACACCTTAATCATAAAATAAGTGTTTACTATTGTCTAGTAGTTTGGTAAGTTCAATTTATCACACCGAGCCATTTGTTAAACTCAGTGCTGAGAACTGGCGCAGGCTGATGGAGTCTGAGGCGAACAGTAGACTCGACCTAGTTCTAGTTTAAGCGATCGCTCCTCTCAATGCTCCACAAGCGATCGCCTCATCACTATTAACCAGCGCTTGCGTTGATAGCCTTGTTTACCTCATCTAATGTTTGATACTCTTTCGAGGGTAAACATCTTAAGGCTCTTAAGACTTGC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCCGTGAGGGGAATTAGTTGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 61727-63867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000028.1 Anabaena azotica FACHB-119 contig28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 61727 37 100.0 34 ..................................... TAAAGCCTTGCGGGTGTAAGCTCGGATCAATATT 61798 37 100.0 33 ..................................... CCTACAATATCCTCTGACAATAACCTCACCTGC 61868 37 100.0 36 ..................................... AGTTGATTATCCTCTATATCTTGTAATGCCCAAAAA 61941 37 100.0 33 ..................................... CCAATAGATAACCAATCAGACATCATACTCTAC 62011 37 100.0 36 ..................................... TCTCTACTGCGCCTACTCTGTCGCTCAACTTATCGG 62084 37 100.0 35 ..................................... AGGGAAGCTAAAAGCACAGCTAATAATGCTAAGGC 62156 37 100.0 37 ..................................... TTGAAAAAATAGGAGAAGTCAAACTAAGTGAAACAAA 62230 37 100.0 33 ..................................... CGCATCCGCTTAGGAGAAAAATTAGCCAATAAG 62300 37 100.0 36 ..................................... TGTGAAATAGCGCAACCCACAGGATGCCTCGGCTCT 62373 37 100.0 34 ..................................... GTTTAATCGGAACTTTTATATTTTTAGCTATTGC 62444 37 100.0 34 ..................................... TAAGTGGAATCAAGTCACTCCACCGCATAGTTGC 62515 37 100.0 34 ..................................... CACGCAATGGTATCTGATAATTCTCCCACCTTGA 62586 37 100.0 35 ..................................... TTATGGCGCTGAACAAAGAGATTTAATTATTAGAG 62658 37 100.0 38 ..................................... GCCATTAAGATATTCCGCAAAACACTCTGTAAACTAGT 62733 37 100.0 36 ..................................... ACTAGGAACAGCTAACCCTAGCCTAATCGTTGTGGG 62806 37 100.0 39 ..................................... CTGGGGTAATTAAATCTTTGAACCAACGCAGACGAATAA 62882 37 100.0 38 ..................................... ACTTAATAGAGGTTGATTACGACGAATCAACAGATACC 62957 37 100.0 36 ..................................... CCATCTTCGGTGAGATAACTTTCAATGGGGTAAATT 63030 37 100.0 34 ..................................... TCAACCACTCTAAAGGTCGCACAAGTAACTTGAA 63101 37 100.0 38 ..................................... AATTGCTCTAGTTCATTAACCTTTTGCACCAAATCTTG 63176 37 100.0 34 ..................................... AGTATATCGCTTAATATTGCTGAGTCCATCGTTA 63247 37 100.0 36 ..................................... CATCGTGGCTGTAGCTGGGGGCTTAGGCGCGATCGC 63320 37 100.0 35 ..................................... AGCAGATGTGTACCTGATGATGCCAAACAACTAAC 63392 37 100.0 36 ..................................... TTTCATGATGCTCAGATACAGTAATCAGCACAACGT 63465 37 100.0 36 ..................................... CTTTAATAGCCTGGTAATTCTCAGGCTTACAATAAA 63538 37 100.0 35 ..................................... TTCATCGGATTCCTTGTGCTATTTTGCAGGCTAAA 63610 37 100.0 34 ..................................... TTTGCAACGCCGCATTTCATGGGAGGCGCACAGA 63681 37 100.0 36 ..................................... AATTTAGCCCACAGGCAACCTTGATATAAAGGACAA 63754 37 100.0 40 ..................................... ACTAGAAACAAGCTTAATAATATGCGGTGCAATGGTTTCA 63831 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 30 37 100.0 36 GTTTAAATTTCACCTAATCCCTATTAGGGATTGAAAC # Left flank : GTAAGTCATAATCCTTGCGAAAAGCGAACCATTGGGCTGTTTCTCCGTCTGCGATCGCATCCACTGTATGCCCAACTTTCAACAACGCTGTCCGTAATGGCTCTAACTGTGCTGGGTCATCTTCCACCAGTAAGATTAACATCAGATTTGTTTTGCTTGCTGTGTTTTTCGCTTACTTATTTTAAGATTAAGTTACAACAGTGACACAAAAGTGTCAGTAACTCAAATTATGCTGATAAACCCAGCCTTTTGCGTCAACCTGTAGGTGTTTTTTCAGACTGATCAATTTTTTCGCCCCAATCCCTTATCCTGCTTAGGTTCCAGCCAATCATATGAAAAAGGAGGTTGACGCAATCTCTGAAACCCTTACCAGAAGTACTTTTGAGCGATTTTTAATTGACCACCTCTTGACAACCCATCGCCTGAAACGCTATTTTATCTCTAGGTTGACGAAACTGAACCTTGAAAACCAAATATATCAATGCTTCTGGAGCCGGGCA # Right flank : CCTAAAGTAGATTTATAATAACCAAAAAAGCGATCGCCAAGTTAAAATTCCACCATACACCCATACACCCTTTTATGCGTCAAGTTCCACTTTTTCCAGTGTTACGAACATTAGGTCTTGTGTTCTGGTTATCTTTGCCGCTAATTGGGTTGAGTTTTTGGTTGGGAAGCAGCTTCATCGGTGAGCAAATACTCAGTCGAGGCTACGACCATAAAAAATATCTCCAAGCCGATAGCCAAATGGCATGGCAGATGAAGAAAAAGATTATGGCTATTGAAGTGGAAACTCTTCCGCACAAAGGAATATCTTTTGTGAGCGTCAAAACAAATCACTCAACGCTGAAAACGATGATATTTGAATTTGCGATCGTCGAACCTCGCAAACTAGAAGCCAAGCTTGCTCAAGAGTTAGGGTTGTCCCCAGAACGAGTTAAGGCGTTAATTCGCTATCAACCAGATAATCAATGACAACTCTCACCTGTTACCTCTAGCTTTACGCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATTTCACCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 38098-36743 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000040.1 Anabaena azotica FACHB-119 contig40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 38097 37 100.0 33 ..................................... TTAATGTTTATTGATCTTCAGGAAGCACACTAA 38027 37 100.0 35 ..................................... TTTCTTCATAATATTCAGCTACTTGAGGCATCCAA 37955 37 100.0 35 ..................................... TCAAATTTGTAGGAGGGGCGATCTGGTAGTTATAT 37883 37 100.0 43 ..................................... CTCACGCTTGCCATCGTGATGAATCACCACAATGGCGCAACTG 37803 37 100.0 37 ..................................... TCTGCGACCACACATTGTATATTGGAAATCCGAACAA 37729 37 100.0 40 ..................................... TTGTGTACAACGACTTTGGTAAAGTAATATCTGATATAAA 37652 37 100.0 32 ..................................... TCCTAACGTCCCCCCCAGCATTCCTGCTAAAG 37583 37 100.0 34 ..................................... GCCTCCAGAGAAATATTTGAATCTTCGGCGTAGG 37512 37 100.0 40 ..................................... TCTCAATCCACCATGCGGGCATAACGCTGATAACAGCATC 37435 37 100.0 35 ..................................... AACATCAGTGAAGCCGATACTAATATCATCATAGA 37363 37 100.0 43 ..................................... CTAACTCCCTTAAAAATTGGGCAGTTGCTTTCAGTCTTTCACT 37283 37 100.0 35 ..................................... CCTGGTGATTCCGGGGGGAAATTAGTTGAAGAAAA 37211 37 100.0 34 ..................................... CAGATCGGAGTATGATAAACAAAAAGAACTAGAA 37140 37 100.0 33 ..................................... TAGTCGTGCGAACTCCGGCGACTAAGCCGGCTT 37070 37 100.0 35 ..................................... AAGATAAAGATTTGATTTTCCCAAACCTAAGCCGA 36998 37 100.0 35 ..................................... TACTGACAGAGGTTAAGCTGTCGATTAAAACAATG 36926 37 100.0 37 ..................................... ACTTCTCTATTTTGGTTAAAGAAATTAGGCAAACTCC 36852 37 100.0 36 ..................................... TTTGATTGGCTACTATCCACCTATTAAACTCTTAGC 36779 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== =========================================== ================== 19 37 98.7 36 GTAGCTATTAACATTAATCCCTATTAGGGATTGAAAC # Left flank : ACCCGAAGATAAGCGGCGGACTAAAATTCACAAAGTTCTCAAATCTTATGGACAATGGATGCAGTATTCAGTTTTTGAGTGTGACTTAACCCAGACTCAATATGCTAAACTGCGATCGCGCCTAGCTAAACTCATCAACCCAGACCAAGACAGCATCCGCTTTTACTACCTCTGTGCTTGCTGTCAGGGAAAAGTTGAGCGCATCGGCGGCGAAATGCCAATGGACACCACCGTATTTTTTGCCTAACTTTGCGTCAACCTATAGGTGTTTGAAATACTCAACCAAATTTTCCGGCTCAAACCCTTACTGCTTCTGCTTTTGAGCCATTTAACACCAAAATGAGGTTGACGCAAACTCCCAAACCCTTACCAGCACTACTTTTGAGCCGTTTTTCTTGGAGCCACTCTTGACAACTCAGCGCCTGAAAAGCTACTTTAATATCAGGTTGACGAAACAGCACCTTGAAAACCAAATACAGCAAGCCTTTCAGATCCGGGCA # Right flank : TAGTTACTCTCTTGGGAAAGATGACATCGGGGTACAGAAAAAAGAAAATCCCTCCAGATAGACAATTAGGAGGGATATATGTTAAATGAAATAGTTACTATCTATTCTGTCATAGATGACCTGTTAAAGGCGATCGCACATGAAGAGGATGTTCGTTGTGAAATGAGTGATGCAGAAATTATCACAACGGCAATCATAGCGGCTATGTACTTTGGTGGTAATCACAGTCAGGCTTGCAGCTATATGAAAGACCATAAATTGATGCCGCGAATGTTAGAAAAATCACGATTTAATCGGCGATTACACAAAGTCTCGATGTTAATCAACGATTTATTTCATCAAGTAGGAATGGGACTCAAAGAGATTAGTGAAGATACGGAATATCTTTTAGACTCGTTTCCTGTACCGATATGTGATAACATTCGCATCTTTAATGCCCATCTCATCCAATCACCAGAATATCGGGGTTATATCGCATCTAAGAAACGTTATTTTTATGG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCTATTAACATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 38695-38875 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000041.1 Anabaena azotica FACHB-119 contig41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 38695 37 100.0 35 ..................................... CCTGCCATAAATTTATTCTCACGCTACCGCCACAT 38767 37 100.0 35 ..................................... AACGTCTAGGACGATCGCCGAGGTTGCGTAACGTG 38839 37 97.3 0 .................................G... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 99.1 36 GTTTCAACGCCGCTCCCAGCTAAAGGCGGATTGAAAG # Left flank : AGGTTTTTAATTTCTGCGTTTACTCCCACATTTGTCAGCCACTGCGTTGGACGGGTTTCCCGGCATAAAGCAAGTGGCGGTACAAGATGCGCGGATTTGTACTACCTGTCTTTCCGGATCAGGAGCAGTCCGCTTGACCTACTTCGTCTTTTATTTGTGCGCTTTACCGCTATTAGTTATACTACCACAAAAGCCGCCCTAGAAGGGCGGGGCTTTAAACCCAGTTTTTCGGTAATAGAGGTGCGGGTTTACCGCAGTGGTGGCTACTGAATCACCTCCGAGCAAGGAGGAACCCACCTTAATTATTTTTTTTGGCAAATCGAAGCAGGGTTGATTTCCCTGGGGATATGCCAGAAGTTTAAATCGTTTGTTGCGTAAGGTTTATAACCTTTAAACTGTCAGTTGATTTCTGTTTTTAACTGTTAACAAACAAGCGATTTTGGGAGATGTGGCAGAAATGCCATGATAACTCTTGATCTGTCATGAGTTTGAAGCGAAGG # Right flank : GTCTACAGAAATCAAAATTTACTGTAGCAAGCACTTTTTATCTCGCCTCGGAGTTTGAGAAGAATTAATAAACAATTAATTTTGTTTCAATGATTAATTATGAAAGTTTTTTAAAAAGGGTGGGTTGAAAGCGAATCCAGTTACGTCCTAATTCACTGGTTTCACTACAACAAAGTTTCTATAATTTAGAATAGATAGAAGCTAAGTCTCTTGCATTACCTAGTGGTGTTCAAGGACAATAATGTGTCAACGCGGACAATAATCTGGCAAAACGGACAATAATTTGTCAACGCGGACAAATAATTTGGCAATCGACAACTATTTCTCACAATGCAAACATAAATGGACGTAACTGGATTCGAACCAGTGACCTCTACGATGTCAACGTAGCGCTCTAACCAACTGAGCTATACGTCCTTAACCACACTATTTATAAGTATAACATACATTCTCAGTAATAGCAAAACTTTATTGTTTTAACCTCTGCTGTGCTAGAGCTA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGCCGCTCCCAGCTAAAGGCGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.70,-6.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 10783-9506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000007.1 Anabaena azotica FACHB-119 contig7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 10782 37 100.0 36 ..................................... CTAGTGAAACTTGATGATGTTCATGCGACAGCGCGA 10709 37 100.0 41 ..................................... TTGACTCAAACACTTGAATTCTTAAATATAGTAATTCTTCG 10631 37 100.0 37 ..................................... ATGTCAAGTCGGCTTTTTTGATTATCCAGTCTGTCGC 10556 37 100.0 35 ..................................... TAAATCCATAGGATTAATAGAAGGTAGCGTCCCGC 10484 37 100.0 39 ..................................... GGGGAGCAGGTAAACGCTGATGCCAAGAAAACTGCTCCC 10408 37 100.0 37 ..................................... TTAGTACTCACAGCACCCGCCGGAGTTTTATAACCAA 10334 37 100.0 41 ..................................... GTAATTCTTTGGAGCCATCTTGCGCCTATGCTGGCATTAGT 10256 37 100.0 33 ..................................... CTTTAACTGCATTGTTTTCATTAACCACATCCA 10186 37 100.0 34 ..................................... AGAGTGGAGGGAGGGAATCTATATAAGATTTAGC 10115 37 100.0 33 ..................................... GCTGGTGTAGAATCTTTGCGTAATACCGCTATG 10045 37 100.0 36 ..................................... AGCTTTACTCAGACTTGATGATGTTTCATTCATCAG 9972 37 100.0 34 ..................................... CCAAAAATTAGCTTTAAAATTAGCTGCACTTTTT 9901 37 100.0 33 ..................................... GTTTTCATTGCTCCCGGCAAACCTGAAACAATC 9831 37 100.0 35 ..................................... CAGTAGTAGAGATGCCAATTGCACCTACCAAAGAT 9759 37 100.0 37 ..................................... ATACGGATTAAGTAATCCTGGCTGATATAGGTCTATG 9685 37 100.0 36 ..................................... ATTTCAATACTGCCTTCACCAGCTTTTTTGAATAAC 9612 37 100.0 33 ..................................... ACTCGCCAAATTGCGCGGCAGTTTTTCGATTCG 9542 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 100.0 36 GTTTAAACATCAAATAATCCCTATTAGGGATTGAAAC # Left flank : AACAATATTTTTATAAGTGATAAAGAATATAAAATGATATAATATATACTGTCTCATATTATAATTAAGACAAAGCATACTTACGTATATTAAAAGTGGAATATTATTAATTATTTACGAATAACAGTGTTAAAAGTGATGCTGGGTTAAGTATGATCTCAGAATCGAGAACAGAATTAGCGATCGCTATTCAATAGCTGTAAGATGATTAGGAGTTGGAGTCAGGAAATTTGGCTGGAGTCACGAGCGATCGCGTCAACCTATAGGTGTTTTTTATCAGACCTCAAATTTTCAGCCTGAATCCCTTGCCCTCTCTGGCTTTGAGCTTTTTTATCTAAATTAGAGGTTGACGCAATTCTTCAAACCCTTACTATGACTGATTTTGAGCGTTTTTCTTACCTGTCACTCTTGACAACCCAACGGCTGAAAAGCTATCTTTACTACAGGTTGACGCAACTGAACCTTGAAAACCAAATACAGCAACGCTTCCACAGCGAGCA # Right flank : ATAAGAAATTTATTGTAGATTCAGGAATAGAAAGGTTTTAAAACCATATAATCCCTCTTATACCAATTTTATATGATCATAAAATCCATTGATTTATCTGCGTTTATCTGCGTGCATCTGCGTTCGATTATTCTATGCAGCTTCATATTAACTTGGTATTAGGGATTGAAACACACCTCATTTATTTATGAGGATTTGCAACACATCAATTATATTTAGGGGCGCACATCTGTGCGCCCCTACCCAATACGGTTCAGTTAAGGCTAAATTGGGCAGAAACATTGACTAAATATCTAAACTAATCGGCGTTTATCGGCGTTTATCGGCGGTTAATTATTCTTATCTGAACCGTATTGCGCCCCTAACCACATATCTGTCGCATTCTTTCTTCAAATTGGCATAATTTTAATTGGTGCGATCGCCTAGCGTATATTAGATAAGCGACTTGACGCACCCTACAGTTTGGATATTTTTGATCGGGAAATTCCTAAAGCATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACATCAAATAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 14132-13213 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSG010000073.1 Anabaena azotica FACHB-119 contig73, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 14131 35 100.0 40 ................................... TATTTTCTTCTTCGCATCCTGCGCAGAAGATTAACAAAAA 14056 35 100.0 37 ................................... TTTTTGTGTTGCTTCCTCCGACGGAGGCAAACACATT 13984 35 100.0 35 ................................... AATTTGTTTCCTGCATTAGTAGATGCAGCAGCGGA 13914 35 100.0 39 ................................... AGTAGTCTCGTTTTTTGCAAGATAAACGATGATAGTTTG 13840 35 100.0 38 ................................... TGTTTGCGTAACCCCAGTTGGTGTGTCGCAGGGTCCCA 13767 35 100.0 44 ................................... AATACTGTAAACATTAGCCATTCCTATTCCACAAAGGGCTAGGA 13688 35 100.0 37 ................................... TATTTTCGTTGGCTTTGGTCTTTGCTGGGGTACAGCA 13616 35 100.0 36 ................................... TTTCCTTCATCATCAGTGCAATGATCTTCAGTTACT 13545 35 97.1 38 ...........T....................... TGACAGAAATATTGCTTAAACCTGTGCCGGGGACAACA 13472 35 100.0 38 ................................... GGTAGGCTGAGGAGCCTCCTCAATTTGAATTTCTTTGA 13399 35 100.0 41 ................................... GGTAGGGGAATGTATATAGGATACCCCCCATAATGATGCGT 13323 35 97.1 41 .................T................. TTCGCAGCAATCTTCGCATTTGGGCCAATCTCGGAAGCAGT 13247 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ============================================ ================== 13 35 99.3 39 GTTTTAAAGCTCTTACCCCTCACGGGGATGGAAAC # Left flank : AAAAATGACCGGACATTTCTTAAACTCTCAAGAAACACAGGTGACAGGTAACAGGTTACAGGTGACAGAAAATAGGGAATAGTTGTGTTTCTTTCATATTTTGCTGGCGCGTAGTCGCGCTAGTGGGAGGCTGACATCTTGCACCTTCGAGTAGAAGCTATGGAAGCCTTAATGAAGAGATTGCATTTTGCAAGTTGCTATGGTATTGTTTATACCAACACCTGCACCATGAAAATTTAATCAGCAAATATTCTCGGCTTTTAACTTAATAGTTAGTTTCCTAAAGCTATTTTGTTAAGAAGTGTAAACTGAGGGGGTTGTACAAACGCCGAAAGAATGATTCTTTCGTAGACCCCTCAGATGCCCTACTGTATAAGGGTTTGAGTTACTTCCAGAAGGTAGTTATTCTCAATAACTATGGTCTATTGACAGGTGAAATACACCCCCCTCAGTTTTCCAGTTCTGTAAGCCTTATTTGGTAAGCCTTTCGTAACAGTAGG # Right flank : GTTGACGGAAAGTGGCGATCGCATTCCAGAAATTGTAGTTTGTCGTGCTGGATGAGCAGGTAGAGTAGAAAGGGCGATGATGCTCCGCACCGCTAGAAGCGATCGCCTACAGCTTAAAAAATGAAAATATGGCTAAGTTACAGATACTATCTCCGGCTTTTTTTATGCCTTTAAAATCGTTACTTCACATCAAATACCCGTCTTCTATTTAACTCAAACGGGGGAATATTTAGGAAGATTAGAAAAACCTGGGGTGCTGTGGTTATACTGCATGAAGCGGCTGTGGAAATTGTCTAAATTGCAATTAACGTAATTCAATAACTACATTTTTTTGCAGGCGATCGCATCCTCAACCCTAACAATTTGTTTCGATGGTTCACAAGCACCAATACCTACCCAAGTATTAGGACCATCTTGCCGGTATTCTTTTTTTATATGTGCATTGTGCTTGCGCGATCGCATCCCCAAACCTAACAATTTTCTCCTGACTGTTCACAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAAGCTCTTACCCCTCACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //