Array 1 23455-33269 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOGA010000025.1 Undibacterium flavidum strain LX15W 25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 23455 37 100.0 34 ..................................... ACGATAAATATGTTTGTCAGATGTCGCCCATGAA 23526 37 100.0 35 ..................................... TGAAAATTACGCATTCAGTGATCAGCGTGCAGAGA 23598 37 100.0 36 ..................................... TGAAATACTTTGGCTATACTGACATCGAATTTTATT 23671 37 100.0 35 ..................................... AAGCGGTGGTCGCTCATTGCATCAACGATGAGAGA 23743 37 100.0 35 ..................................... TTCGCAAGTTGAAAGTGGTTGGTGCGTCATCATCA 23815 37 100.0 34 ..................................... ATGTCTGGATTGACGATTGCCCATTGGCCATAGT 23886 37 100.0 34 ..................................... AATTTGGAAGCGAAACGGAAAAGCTTTACTTGTT 23957 37 100.0 34 ..................................... CAGTTTTAACGTAATCTGATCGCATAAGTGTCAG 24028 37 100.0 35 ..................................... TGAAAATTACGCATTCAGTGATCAGCGTGCAGAGA 24100 37 100.0 34 ..................................... TCGGTTAGTCCTCAAGCATTCGTCAAAGATCAAA 24171 37 100.0 34 ..................................... AAGCGGTGGTCGCTCATTGCATCAACGATGAGAG 24242 37 100.0 34 ..................................... CCGTTATGATGCAGCAAAGCATGAAGGTATTCAA 24313 37 100.0 34 ..................................... ATCGTTCAATATGTCAGGCTGTGCGGTGTATAAA 24384 37 100.0 34 ..................................... AGCACAATCGAATTGGCAGCAACTGGTGACGCTA 24455 37 100.0 36 ..................................... AAGTCTCCGATGTGGTTGATCCTATGGTATCGGCGC 24528 37 100.0 34 ..................................... GCCATGAGCTTAGCAGGCGAACTAAAGCCAGGCG 24599 37 100.0 34 ..................................... TGCATTAATACCGCAGAACTACAAACGCGAAGAC 24670 37 100.0 37 ..................................... AGTTATGATATTGTGACTGGTGCATTATCTGTTGATG 24744 37 100.0 35 ..................................... CCTGCAGCGGTAGCTTCACGCATTCGCGTAATCAG 24816 37 100.0 35 ..................................... AGCTTGATTTGTGAGCGCCTCCCGCAAGAGGAAAT 24888 37 100.0 34 ..................................... ATGATCCAACCCTCGCAAACAATTTGCCCTCGGG 24959 37 100.0 35 ..................................... GCCAGCTGTGCGCGTTGGTGGTGGCTGCTATTCGC 25031 37 100.0 35 ..................................... CACGTTAACCAGATCTGATCGCAACTCAGCAGGCT 25103 37 100.0 33 ..................................... TAAGAAACTGGGTGTCACGCCGCAACGCATCAG 25173 37 100.0 34 ..................................... ACGAATCGCCAGAGTGGCTGAATCACGCTCACCT 25244 37 100.0 34 ..................................... AAACGTATCTTCGACAAGCTGGCGGCACTTCATG 25315 37 100.0 34 ..................................... TGCAAATGTACGAGCAATCAAATCTAAACGCATA 25386 37 100.0 34 ..................................... AAGCGCAAAAGACTATTTGCCGCTAGTACAGGCA 25457 37 100.0 34 ..................................... TGGATTGAACACAGGCATGACCAGAACAGTGAAA 25528 37 100.0 33 ..................................... AAAATCCTATGGACGGTCGGCTGCGACACTTTA 25598 37 100.0 33 ..................................... AGATTTTGCCCAAGTTGAGGGATTTGGGATAAA 25668 37 100.0 34 ..................................... TTACAATACATCGCGGACCAAAACCAAGCGGCGA 25739 37 100.0 34 ..................................... AATTTTGTTAATCTCAAGCTGTCCCGCTATCTGA 25810 37 100.0 34 ..................................... TTGCTGACCATAATTATGAGTATTGAATATATTC 25881 37 100.0 35 ..................................... ATTAAGTTCTGAGCGTAAAAAGATCGCTCTTGTGC 25953 37 100.0 33 ..................................... ACGTAACATTCATTACGAGCAGCTACGCGAATG 26023 37 100.0 34 ..................................... TCTAATACATCAGGGAACCAAGGATTATCCAGCC 26094 37 100.0 35 ..................................... AGGTGAATGGTGCTGGTGAAAACGGTGAGCATTTG 26166 37 100.0 34 ..................................... TCAATGTCTTGTTGCAAGTAACCCATGAGATTCA 26237 37 100.0 35 ..................................... TCAATGTCTTGTTGCAAGTAACCCATGAGATTCAT 26309 37 100.0 35 ..................................... TGCTATATTGTCCTTGGCAATACCGCTAAGCTTAT 26381 37 100.0 34 ..................................... TTTTGCAACAAAGCGTCTTTCATCCAAACATACG 26452 37 100.0 35 ..................................... ATTACAACAGATACGCAATCGTCAGGCGGCTGCAT 26524 37 100.0 34 ..................................... AGGTTTGGTATGGTGTAAGGTCTGATGAATCGCC 26595 37 100.0 35 ..................................... TTATTTTCCCCAGCACGATATAAAATAGCAAGGGG 26667 37 100.0 35 ..................................... CCTGAGACTGTGACCTTACGAAGCTCAGAGATTCC 26739 37 100.0 34 ..................................... TATCTCAGGCGGGGAAAGGTCGCCAACAGCTTGA 26810 37 100.0 35 ..................................... ATTACAACAGATACGCAATCGTCAGGCGGCTGCAT 26882 37 100.0 34 ..................................... CTGCCGTTGCTGCGCCTGAAGTTGATCCACCACC 26953 37 100.0 35 ..................................... TCCGTTGTAGGACTTGCATCCACTGACCGCATCTT 27025 37 100.0 35 ..................................... GCGCAATATTGGATGGCATCAAAACGCAGACTCGC 27097 37 100.0 34 ..................................... AATTGGTAAGCAAGCGAGTGGATGGAAGAAACAA 27168 37 100.0 34 ..................................... TGGATGCAGCTCACCAACACGATTTTGTGGCACG 27239 37 100.0 36 ..................................... CAGACAAGGACGGACTACCAGGCAAAGACGATGATG 27312 37 100.0 35 ..................................... AACATTGTTTGCGACAAAGTATCTCGGCATCGACT 27384 37 100.0 33 ..................................... CTTTTTCGTAGAGCGTTTGAATGATTGACTCAC 27454 37 100.0 35 ..................................... ATATGGCTATCAAGCAGGACTGACAGAACAAGCAA 27526 37 100.0 34 ..................................... AATTGTCGGCATCATTGAAACGCCGGATCCGTTG 27597 37 100.0 34 ..................................... ATATCAGCCTTTAGGTATTGCAAATCAATCTGGC 27668 37 100.0 34 ..................................... TCTGTCACCGTCGCCACAATGACTGCCGCACCAG 27739 37 100.0 35 ..................................... AGCAAAAAAAGCAAGTCATGCAGGAAATCCAACGC 27811 37 100.0 35 ..................................... ATTCAAGATGTCGTTGTAGTCAGCGATTACCGCAG 27883 37 100.0 34 ..................................... TACAACCGTGCTATTGGCTATAACGAAGATATTG 27954 37 100.0 35 ..................................... CAGCTCTGCTAAGCTGCACAACGCCGCTGGCGCGG 28026 37 100.0 36 ..................................... TCAGCGTGAGAAGTTGACTAAGCAAGAGGCTGAGTC 28099 37 100.0 34 ..................................... ATCCAATTCGTGAGTTCTTGAGTGCGCTTAAGTG 28170 37 100.0 34 ..................................... GCGCAGAGTCTGATCGAACATCGATGGCATGCGT 28241 37 100.0 34 ..................................... AAATTACCCTGGTCTTGAAGCACGACAACCATGC 28312 37 100.0 34 ..................................... GAATTGGGTACGACCTGGTACGCCTGATGCGGGG 28383 37 100.0 35 ..................................... CTGAGAACAGCCCTGAACCTGGAAAATGGCGTAAC 28455 37 100.0 35 ..................................... TTCGATAATCCGCTGGTGCGTCAGGCTTACCTAGC 28527 37 100.0 35 ..................................... TGCATGATGCTACATGCTGGCGGCAATCGCATCGA 28599 37 100.0 34 ..................................... CAGTTTTCGGCGCGCAACCGCAAAATTTCCCCAA 28670 37 100.0 35 ..................................... AAAATTACGGCCAACATACAAACCGGACAACTGGA 28742 37 100.0 34 ..................................... TCGATATCGTTGAGGATGACGAGGGTCTGCTGAT 28813 37 100.0 35 ..................................... AGCTTATGTTGCTGGTAGTGTTTATGGTTTGGGTA 28885 37 100.0 35 ..................................... ATAACCTCCGTATTTAAGCAAATCGGCATCGGCAT 28957 37 100.0 35 ..................................... AACATACCGAAGGACGCACAGGGGCGCAGGCTTTG 29029 37 100.0 36 ..................................... AATATTGCCCCGTGCTGCAATCGGAAAAGAATAAGC 29102 37 100.0 34 ..................................... ATGCACCATGCCGTTGTCGTTGTAATCGTCAGCA 29173 37 100.0 34 ..................................... CTGTTGTCGGACCCTTCATTGCGCCTGCTGCGGC 29244 37 100.0 35 ..................................... TGGTTGACGAACATTAGCACCGTGCGGACAGGGAA 29316 37 100.0 35 ..................................... TTACCGACCAATGCGGCGGGCTTCATGGGCAGCGC 29388 37 100.0 35 ..................................... CTTAAATGCGACAATGGCAGGCGTGCGCATATTGC 29460 37 100.0 35 ..................................... CCGTGCCGCCCCTGCGCCTTTCGTTGCGCCCGCAC 29532 37 100.0 34 ..................................... TAGGTTTCGGCATCAAAGTCGATGAAAACGGATG 29603 37 100.0 34 ..................................... AGCATCATAATCGGCGCAGGCTGCGCCGTTACGC 29674 37 100.0 34 ..................................... AGCATCATAATCGGCGCAGGCTGCGCCGTTACGC 29745 37 100.0 35 ..................................... CAAATTAATGTCACGGATTGCCCCGCACTGATTCG 29817 37 100.0 34 ..................................... CGTTTAAACGGAACCACGATGCACCTTGCGCCAT 29888 37 100.0 34 ..................................... AAGTTTGAGGCGGAAGACCAAGCGGCACGCATAG 29959 37 100.0 34 ..................................... TCGTCACGCTTGCGGCAAAACTCCGCAAACTGCC 30030 37 100.0 35 ..................................... GATCATGGCACGCGTTTGGCGGCAAGATCGCTGAA 30102 37 100.0 34 ..................................... TAACGAAGTCAGGCCGGGCAGCACTTGCCAAGGC 30173 37 100.0 35 ..................................... TTTTTGATGATGTTGTAACGCACGCGAGTTTTAAG 30245 37 100.0 34 ..................................... ACTTTTATCCATTTAGCAAGCATTGAATCTTTGC 30316 37 100.0 35 ..................................... AAAGTTTCACCCGCCAAAAGCGGTACTTTGCCCCT 30388 37 100.0 35 ..................................... TCACAATGGAGTGCGTATAAATGCAAATCTTTAGC 30460 37 100.0 33 ..................................... ACATAATCGCCAGCCACGAGAACTTCTACACGG 30530 37 100.0 35 ..................................... CGTTCTCTTGCAGAAGCGTCCCCTCGATTCATGAA 30602 37 100.0 34 ..................................... ACCGCACTGATATTATCGGCGGCGGGGACTGACG 30673 37 100.0 35 ..................................... ATCACTGTAAATGCAATCGATAACAAATTCTTCGA 30745 37 100.0 34 ..................................... CACCAGATAGTAGGCTTGTCTTTGCCTTGAGAGT 30816 37 100.0 34 ..................................... ATGTATGGATTGACGATTGCCCATTGGCGATAGT 30887 37 100.0 34 ..................................... TAATATTTGTTGACATATTGCATGATGATTCTAT 30958 37 100.0 34 ..................................... ATCTGTCTTTACTGCGCGACAAAAGCAAGTGTAA 31029 37 100.0 34 ..................................... GCGAAAAACCAGATTGCCCGCACTAAAGAAGTGA 31100 37 100.0 34 ..................................... CTTCGAGCGCGGCTTCGTTGTCCGGCGCTTCAGG 31171 37 100.0 34 ..................................... CTTCGAGCGCGGCTTCGTTGTCCGGCGCTTCAGG 31242 37 100.0 34 ..................................... TTGCTGACCCCTTCGAGCGCGAATTTACTTGCGG 31313 37 100.0 34 ..................................... ACGAGTACGATCCAAAAATGGTTTGGGTTGAGTG 31384 37 94.6 35 ..........A...A...................... CAGTTTATTTGGTTCGCCGCATTGGCGAGTGTCGC 31456 37 94.6 34 ..........A...A...................... GTACTCCATGCCTTCGCGTTGAACTGGTGCAAGA 31527 37 94.6 34 ..........A...A...................... ACGATCAAGGGCAAGCTTGAAAAGAAAATGGCGC 31598 37 94.6 33 ..........A...A...................... AAAAAAACAAGACCTCTTTATGTGTGCGAAAAA 31668 37 94.6 34 ..........A...A...................... CTTGATCGAATGAAAGCCACGACGGGAACGGCAG 31739 37 94.6 34 ..........A...A...................... ATCATGATTTTATCTTTCAAGTTATTTTCGTAGG 31810 37 94.6 34 ..........A...A...................... CACACGTGACGCGCCCGCTTGAATCACTTCCTCG 31881 37 94.6 33 ..........A...A...................... ACACTCAGAACGCCAAGCCTCGCTATCGCTGGC 31951 37 94.6 34 ..........A...A...................... ACGTGGCAAGCTGTAACGATGGATGATTGCGAAA 32022 37 94.6 35 ..........A...A...................... TCGGTCTTCGTCACTATCATCGGTCTTGGTACTTC 32094 37 94.6 35 ..........A...A...................... ATCTTTATGAGATGTACATGAAATGGTCGCATCAC 32166 37 94.6 35 ..........A...A...................... GGGCGTATCGGGCGCGGTCACAGTTTCGTCAGGCA 32238 37 94.6 34 ..........A...A...................... AATCAGTTCGGCGGTGGCTTGCAGGCTTTGTATG 32309 37 94.6 34 ..........A...A...................... ATGAGTAAAGCTGCTGCTGCACTCGGCTCGCAAA 32380 37 94.6 33 ..........A...A...................... TACCGTTAAATTTGGTGCTTCACCCTGAATGAG 32450 37 100.0 34 ..................................... AAATAACGTCCATACGTCGCTCTGCTGATGTCGA 32521 37 100.0 34 ..................................... AGGCAAATCGACCTTGCAGCACACCATACTTACA 32592 37 100.0 33 ..................................... GTGTAATCGGCGGCGTGGATCAGTTGGAGGCAC 32662 37 97.3 34 ............................A........ TCAGTAGCACCTTAACCACTTGAAAGGAATTACC 32733 37 100.0 34 ..................................... TCAGTAGCACCTTAACCACTTGAAAGGAATTACC 32804 37 100.0 35 ..................................... ACCTGATCGACGATAGCCCCTACCAACCTAGGAAT 32876 37 97.3 35 ......T.............................. TTCTTGCCACCATCCCCATTTAGATTTTGGATTGA 32948 37 100.0 34 ..................................... GACATCGAGTAGCAATAACTGTCAACCGATAACG 33019 37 100.0 34 ..................................... GCGAATGTAGCCAGCTAAACTTTGATCGGTTTTC 33090 37 97.3 35 .......T............................. TCGTTGTACAGAATGATGACTTTACTCGTACCGGG 33162 37 91.9 34 ..........A...A..A................... CGAGTACGTGGCGAGTCTATGATCGGCATTGGTA 33233 37 94.6 0 ........G............T............... | ========== ====== ====== ====== ===================================== ===================================== ================== 138 37 99.3 34 GATTCGCCCGGTCATCTGATCGGGCGTGGATTGAAAC # Left flank : GCTATTTACCTTTTTTATCGAAATAGATTTTATGCTAATCATCGCTACTTACGATGTATCAACTGACACTGCAGCGGGTCGCAAGCGATTACGTCGTGTCGCCAAAATTTGTGAACGAATAGGGCAACGAGTACAAAATTCGGTTTTCGAATGTAATATCAATGAGATACAATTTGAAGAATTAGAGCGCGAACTGTTAGCAGAAATCGACAAAACCAAGGATAATTTACGCTTCTATCGGCTCACAGAACCTGTAGATTTACGTATCAAACAACATGGATGTTTTCGGTCCATTGACTTTGATGCACCCTTACTTGTATAAGCGCGAACCACGATCAAAGACTACTCATGCATTCAGTTCGCGCAACGCTTAATTCATTGATTTGCATGAAGATATTTCCTCCTTCCCACCAACTACCTTCCATTTGCGATATACTTTTTTCGGGGTTCGCGCAGAACCTCAATTTCTTTGTGCAAAAACAAAATGTTATTAGCGCGAG # Right flank : CTGATTGCCGTTGTTGAAGTTCTGTATCCATGCACAATTCGCCTGGTTATATAACTATTTCGGTGGCGAATAAAACAATTGCAGTCAATGTAGAATTCGTCCGGTCACTTGGTTACACGAGAACTGATGCCGAGTCAAAACGGTAATGAACATCGATACTTAAATCTGAGAATGAAAATGTATCAATAAAACTGAGTTTGAACCCACCGAACTCGATGGGTTCAAACAATTTGATGTAGCTCTATAGATGGCATCACCAAATTAATACTTCTTAGCCTTACTAGCCGGTTTCACATTCTCAAAACGCCCACCGCTACCACCTCGTGCTGTCACGGGTTTCTTCGCTCGTGGCGCTGCATCTTTTTCAGCTACACGGCGATTGCCGCCAGTGATGCGTTCTTTCAGTGGCACCGGTTTTGCGTTAACCAACATCGTGCTGCTGCCGATTTCTTTGATGTCTAGTTTTTTACCTGCGACCCACACGCCTTTTAAATGCGTGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCGCCCGGTCATCTGATCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //