Array 1 46965-47135 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNZ01000016.1 Prevotella jejuni strain DSM 26989, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================ ================== 46965 26 88.5 45 ....A.............G....A.. GTTCTAAGAGTTACTACTTTTGAGCACGACACAATCATCAATCAG 47036 26 100.0 48 .......................... ACGCTCGGCATTATGAACATTTTCCAAATCTTCGTCAGTATGCAGGTG 47110 26 84.6 0 ....A...............AC.G.. | ========== ====== ====== ====== ========================== ================================================ ================== 3 26 91.0 47 TCTTTATCCTTGTTCTAATGGAATAT # Left flank : CATTCGGAAAATAATGTGGGTCTTCAGGATTTTGGAGTGATAAGGTTTGCCACTTGTGTTTAGAGTTTGAAGCAATGTCACACGGAGACACGGAGAAAACGGAGGATTATTAAATACAAAGCTATAGTAGTAACAGAGGCACCGTCGGTGCATAGAGCAACGGAGCTTGTTTGCCAATTCTATTAGCAATTTATATACAAAACGTTTATTCCAAAATATTTGTCAAGAATCTGTATGCTGCATCTCCGTCGCTCTTTGTGCCCTCGGCACCTCCGTGACATTGCGTTACCTCCGTCCCCTCCGTGACTCTGTGTGCCTTATATGTAAGAGTTTTAGTTTATCACTCCATATTTCGGATGAGACAATAATGTTACCAACAACTCATTTTCAAGACATCCCTACCCTAACCACCAAGAACTCTACCCCCAAAGAGCCATGAGTACTAATGGAAAGCAACTACCTAATTCCACATCGCCATGGACAACGAGGAAAACGACGTT # Right flank : TACGCTTGGAGTGCTTGATTGAGTTCTTATAAATTTAATTTATTCTGGCATAGACATGTTTACCATATATATAATGAGATAAGATAGAATAGAAAATAATCCTACAAATACCCATTCTAAGATGTTAGGTATTTTTCTCATATCTAAATATCTTATATTTTGCAAATCTATATCCAGATGCAGGAAACATCGATTTCTGCTTGAAATCAGAAACCCATTGTTCACCATTCCATATTGCTATATGCCCAAAGATATGGTTTTTAATAGCAGGAAATACGATTATATCACCTTTCTTATAATCTTTTGTATCTATTACCTTAAAACCATATTTCGGTAATACTTTAGAATAATAATACGCTGGATAAATTCCTATTGGACATCCTCCTGCTTGCATAGCCCGCATAACAAACCATGCACAACAAGTATGTGACCTACTTAGTGCATTATTTGTGACATATACAGCCGTCTTCTCTGGATTATAACTAAAATTTCTACTCCAT # Questionable array : NO Score: 3.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTTATCCTTGTTCTAATGGAATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 48559-48960 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNZ01000016.1 Prevotella jejuni strain DSM 26989, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 48559 37 89.2 36 A..............A.........G..G........ CGCTTTGTGTGGCACAAAGAAGACTGCAAAGTATTT C [48562] 48633 37 100.0 37 ..................................... TTACATTTCCTCCATTCGGAAAGTCATACATGGAAGA 48707 37 91.9 36 ...............A.........GA.......... TATTTACAATTGGTTCAAAACTCAAAACCTAAAGGA 48780 37 100.0 35 ..................................... AAGTATGGTGTATTTAGAACAGAAAGTTTATCCGA 48852 37 100.0 35 ..................................... CAGAGGTAACGAGACGGTAACCGTCTCTTCTATTC 48924 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 96.9 36 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Left flank : CTATATGATTTACTTGAAATGCATAATTACATACAGAAGCTAATACTTTAGCATACAATACACAATGAGCATTAGTTTCCTTCTTAAATGTAACTGGGCTACATTTGTCAGAAAACTTTAATGTCTCAGCAGTTAGCTCAATGCTATAATCAATTATCTCATCTTTAGACATGTTTTTTGTCTTAGACTTAATAATTTCTTTTTGAAACTTTGGAATAGTTATTGAACCATCTCTATTATGGCTTTTTACTAATCCCAAACGAAGAAAAGGAATAACCAAACTTATTAGTAAGATAGTAATCAATCCTCTTTTGAGTAATTTATTTTTAACTCCTATATTAATTAAGTAGATAATAACATATAATACTAATACTACTATTATTAATAAAGGTACTAAAAATAAAAAACTCCATCCAAAATCACCATAGTGTTGAAATGAATAATCTAATTGTTCACCCATAATATAATTGTTATTGTTGTTTATATTTTCCTAATTTAAT # Right flank : GGGTTAGGGGCGTGAAGGCTTTGTTTCAGGCAGGGGGAGAGTAGTAAGACTTATAAATCCGGGGTTTGTTAACAGAAATAACTACTTTTTAAGCGGGTGCAAAGGTAGTTATTTTTTTGGCAAAATGTCAAGGAGCGCAGGGTCAAATAGCACTAATCTGGAGCGGAAAAACTTATAAGTTCGTTCCTACCTGATGTTTCCAGAAGCGGGAGGTGATATCCTCGAAGGATCCATCTGGGCATCGGCGGTACATCCGCTGATTGGTGCGTGGGGAGTCGAGGGCACCGAGATGGCGGAGATAGGGCCCCACTTTGATATAGTCGAAACGCTGTTGGTCGATGAGTGGGGAGATTGCTGTGCGCCCAGTGTACCAACCAACTTTCAGTCCTTCGTGGTTCTGTCGCACGTGTTCAGCGAGCCTGTCGACCTCAGCAGGGTCGCCATCGCCCCCCATAAATCCCACACATGTTATCGTGTCTTTCGCTTCATGAATCAATGCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 48210-51557 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNZ01000025.1 Prevotella jejuni strain DSM 26989, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 48210 47 100.0 29 ............................................... GTATGGGGAGTGGTTATTCCCATCTACGC 48286 47 100.0 30 ............................................... ATGTCTGGCCGTCCTCTGCCGAACGACATT 48363 47 100.0 30 ............................................... TTTCACAAAAAGAGTCCCACCGATAGCAGG 48440 47 100.0 30 ............................................... TTACATCTTCCTCGGTGGTGTTATCAGTCC 48517 47 100.0 30 ............................................... AATGAGGACAATACCGTTCAGACTACTCCT 48594 47 100.0 29 ............................................... AGTTTGTGCAAGAAAAAAGCGTATTATTT 48670 47 100.0 29 ............................................... AGAACCTTAATATTGAAAAAACGTAGTTC 48746 47 100.0 30 ............................................... TAATATTGTTACTACATTCCAGTCTGTTAT 48823 47 100.0 30 ............................................... CCATAGCGATAGCACCTTAAAGCGTAGCGG 48900 47 100.0 30 ............................................... GGTTTTTGGATCTTCGACCCGAACTTTTTT 48977 47 100.0 30 ............................................... GTGTTTTTCAGGCATATAAATTCTTTATCT 49054 47 100.0 29 ............................................... AGCGATCTTAGTACATTCAATCGCTTCAT 49130 47 100.0 30 ............................................... CTAAAAAACATTCCTTATTTGTTATATCTA 49207 47 100.0 30 ............................................... TCGCATGTGCATAAATGGTATTTACTGTAA 49284 47 100.0 30 ............................................... CAGCTCTCTGTGACTGCTGGTATACTTATA 49361 47 100.0 30 ............................................... ATTTCCTTGCGAAGCATAACAAGGGGTATA 49438 47 100.0 30 ............................................... AGAGGTACTGGTCAAGCTCTCGGCTCTCGT 49515 47 100.0 29 ............................................... GCATGACAGCTATCTATGCAGATAGCAGC 49591 47 100.0 30 ............................................... CATGCTATTAAGTCACCCATTGCTAGGCTA 49668 47 100.0 30 ............................................... ACAATCAGAGACATAATACAGGGAATTTAA 49745 47 100.0 30 ............................................... GCATACTCAGCCTGTATGTTTGATATTGCA 49822 47 100.0 30 ............................................... CGCTTTGTAACTCATCCTACTCTAAGATTT 49899 47 100.0 30 ............................................... AAAACATCTTTGGGTACAAAAAGAGAAAGT 49976 47 100.0 30 ............................................... CAATTAGTCAAGATACATTTAGGGGATTCT 50053 47 100.0 30 ............................................... TATGGATGATTTCCGTCAACTCGTCCGAAA 50130 47 100.0 30 ............................................... ACTTGTGCATGGCCTGTATGAGCAAGATTA 50207 47 100.0 30 ............................................... ATGGCTTGTATGAAGATGACTTCCATGCTA 50284 47 100.0 29 ............................................... AGTCTATGACTAAGGGTGAGAGTGTTGTA 50360 47 100.0 29 ............................................... TAATACTGGTGGCGCTCCCTCTGTTAATT 50436 47 100.0 30 ............................................... TTGCCAAGATTGGCGGATTGATAATTGACG 50513 47 100.0 30 ............................................... TAAGTCAAAGTAACAAATAAAGAGTAACGA 50590 47 100.0 30 ............................................... TACTTTTGCTTGACATGAAAACAATAGATT 50667 47 100.0 30 ............................................... TCACGAGAAGAAACACTACCATCTGTTAAG 50744 47 100.0 30 ............................................... TCGATAGAAGTGAGAGTTTTAAGAGTAGAG 50821 47 100.0 30 ............................................... TATCGCAAAGTAGTTTCACGCTGTTTTGCA 50898 47 100.0 29 ............................................... AAGCATTCGCTACTGATGCTTCTGTACGT 50974 47 100.0 30 ............................................... AAGGGTCTTCTTCGCAAGTGCATCCTTCAA 51051 47 100.0 30 ............................................... ATTCTGAAAGAAGATTAGATAAACAACCAG 51128 47 100.0 29 ............................................... ACTCTGGTGCTAAAGTAGCTGCTAATAGT 51204 47 100.0 29 ............................................... CTGCTGACGCTCAAGATGACTTCATGAGT 51280 47 100.0 30 ............................................... AACGGCACAGGTCAAGCACTTGGTTCTCGT 51357 47 100.0 30 ............................................... AAATTCCTGTTCTGTTTGAGTATCACCGCA 51434 47 100.0 30 ............................................... TCTTCGTCGTCGTCAGCTAACTGTTGTCCC 51511 47 97.9 0 .........................A..................... | ========== ====== ====== ====== =============================================== ============================== ================== 44 47 100.0 30 GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC # Left flank : ACAGAATTTTCCTCTAAGATACTTCTATGGAGAGAGGGCGAATGCTATAAAAATACAAATATGGATTACACTTATAGCCAATCTGTTTATAACACTTGTGAAGAATAAAATAAAGAGACCCTGGAGCTTCTCAGGCTTGGCTACAATGATAAGAATTCTACTTATGAGTTATGTATCAATACAAAGTTTCTTTGAGCAGCAACATAGAGATTGGGAAAGATTGATTACCCAGGTAAAAGCCCCGCCAGAAGAGCTGTCATTGGTCTAGGGGGGGGTATTTGAAATTAGAACTAATCATGAGTATTTCAGCAGGGTTGGGAGAGAATATTGCAGCATATAGTGGTTTTATCGGACAGCAATATATTACAATACAGTCGCTTTAATCAATATACAATACAAAAAATCCCATTCAAAAGGAATGGGATTTTGAGTTGTGGATCAAAATTTATTTTTACAACAACTTTATATGTCGCTAACACACAATGCTTTACCACATATCA # Right flank : CTTATCATTTATTATACTTTCTCGTCACAATGGGGATTGCTATTAATACCACAAAAATGGTATTTTTCGATAAAAAGGACTATTTATAATAGTTTTTGTAATAATTACAAGGGATATTCTTTGCCGTTTACGGGGAATTATATATCTTTGCCGACGATTTCAAAATGAGGAGTGGAAGACTACTGTTAACGAAGTTCTAAAGACAAAAGGACAAGGGGATTAATGGATAACATTCTGAGTGAGAAAACGAGTTCATTATTAGGGTAATAGTGAGCCTATCATAGGGTAAGACCATATCCAGGATGGAAGAAATTTAAAATCATCGTAGAGTAAAACCTGCTCACAGTAATTAGAAAGCCTAATTAGAGTGATCAAAAGGCCTACTCATAATAGATGGGGAGTCTAATTAGAGTAAGTGAAGGGCCTACTTATCGTAAAAAAGAGGCTTAATTAGGGTAAGTGGAAGGCTTAAACATAGCAGATGGGAAATAAAAAAATAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //