Array 1 93081-92107 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMU01000002.1 Parabacteroides distasonis strain BIOML-A14 scaffold2_size455571, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 93080 33 100.0 32 ................................. AGGTGGATGTTATCAATCCCAAGACGGGCAAA 93015 33 100.0 36 ................................. CTTCGCAAGGTGTTCCCGCATTGATACAGGAGCAAA 92946 33 97.0 38 ................................C TGCACGAAAGCGAGCATCGTCAACAAGGCGATTGACTC 92875 33 100.0 32 ................................. ATATTACTTGAAGATTATGATATTGAGGCGGC 92810 33 97.0 34 ................................A ACAGCACGCCGCAAGATACGACGGATTACATAAC 92743 33 100.0 37 ................................. ACAGAACTGTGGACGGTCTGTGCCTCGATATACGAAG 92673 33 100.0 34 ................................. ATTATGAGATTATTGGAGGAAGTTAATACCACCA 92606 33 100.0 35 ................................. ATTATGAGATTATTGGAGGAAGTTAATACCACCAA 92538 33 97.0 34 ................................A GGATACTGAAAACGGAGAATAACAATCATGGCTA 92471 33 97.0 34 ................................C ACGTGGAACAAAGTAGCGGAAGGTCTTAGGCTTT 92404 33 97.0 32 ................................A CAATACCCAAAGCGTTTATGAGTATTACCTAA 92339 33 97.0 34 ................................T TACCATTGGTCGAATACCCGATCTTGACAAGACC 92272 33 97.0 33 ................................C AAGTCATCCACGTTTTTTTGAAACTCCGGATGA 92206 33 97.0 34 ................................T TTGGTAAGCTCAACGTAAAACTCAATTTGAGACT 92139 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 98.2 34 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACG # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : TTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACATTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 110813-110076 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMU01000006.1 Parabacteroides distasonis strain BIOML-A14 scaffold6_size271891, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 110812 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 110735 47 100.0 30 ............................................... ACAACAAGACTGTACTCGAAGGAGGAGTTA 110658 47 100.0 30 ............................................... ATTCGCTTAAAGCATGAGCCGATACGTTGA 110581 47 100.0 30 ............................................... TGGGTTTGATATACATGACACCCAAAAGGA 110504 47 100.0 29 ............................................... ACACAAAAGCCGGATGCGTTGGCGCAATC 110428 47 100.0 30 ............................................... CGTCGTTTCTCAGATAAAAATAAAGCGATT 110351 47 100.0 29 ............................................... GCTTTCGCACAGACTTATTTTGCGGTACA 110275 47 100.0 29 ............................................... GTTGATTTGATTAAAAGAACAGGGAGACT 110199 47 100.0 30 ............................................... CGCTTTGGATATAATGAGCCTATAGAGTAC 110122 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 10 47 99.2 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //