Array 1 1751300-1751600 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVNH01000001.1 Roseobacter sp. HKCCD7632 NODE_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1751300 36 100.0 30 .................................... CGCGCCTTTTGGCAAGGGCGGCTTCGACGC 1751366 36 100.0 31 .................................... CCGATCTCTTCAACCGGATGTCCGGCCAGGA 1751433 36 100.0 30 .................................... CCATAACAAGCTGCGCCCCTATCCGGGCGA 1751499 36 100.0 30 .................................... ACTCTGGCCAATCTTCTGGCCTCCAGCCGT 1751565 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 100.0 30 GTTGCGGCTGGACCTCGAATTCTGAATGGCTAAACT # Left flank : TATCGGGCGCGAGCGCGGCGATCAAATGATCGTTGGGGTTTGGTGGCTCGCCGATGAACGTACCCTTGCCCTGACGTCGCCAAACCAGCCCTTCGACCTCCAACGCATCTAGTGCCCGGCGCACGGCCCGGCGGCTGACATTGAAGCGCCCAGATAGCTCCCGTTCTGTCGGAAGTTTTCCGTCTTTCTCGACCGCGCCACGACGGATCAACTCGCGAATCTTGGCGCGAGCGAGCGACGCGTTGTCTTGCATGATCTGAGCTGTATCGCGCACGGCTTTCTCCAGAACCGGGACCAAAGTGGATTTGGTCCGAACCAATTTTACTTTGGTTCGCGTGCCGCAAAGTTGTCAAGCGATTCCCATCCCGGGGCTAAGCCGGGCCGTAGATCGGCGACGATGGCGGTGGGCCGAAGGGGCGAGAGACGGGATGTCGACTAGCTGTTCGGCATCCGAGTCTGTGCGTCCGGTTGCTGGGCCATGCGAGGGGATGCAGGCAACG # Right flank : TCGATCGCCGTGTATCTTCTTGTTTTTACAAGAGGATACACGGTTTGTTGTTACGCAAATCCGCTCAATTATCTTCAAAACATCACCAATTGCTCTGGATTCTTGCGCGCCGCGCGTCGCCCTTGATCTGAGAAATGAATGATATCTCGATACTGACGATCCGTGAAATTGAGGATCTGAATGTCGCCCATCGCAGGGAGGTTCCGTTCGATACGGGTCACCCGGGTCTGAAACGCCTCCTTGCCATTCACAAACCGGGCATAGACCGAAAACTGGCTCCGCTCGAAGCCCCCGTCGAGCAGGAAGTTGCGGAAATCCGTGGCCGCTTTGCGCTGCGGCTTGGTGTCGGTGGGCAGGTCGAACATCACAAGTATCCACATGAGGCGGTATCCTGAAAGAATGGCGGGCTGAAAGGTCATGCACCCAACCCCGCGAGCGTCAGGGTATCGGGCGGTCGCGGCAGGGCGAGAGAGAGCTTGCCGGTCTCGAAGCTTTGCCCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCTCGAATTCTGAATGGCTAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 20556-20921 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVNH01000005.1 Roseobacter sp. HKCCD7632 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 20556 36 100.0 30 .................................... CAGCTCTATCAGTGCATCAGCTTTGGTCAT 20622 36 100.0 30 .................................... CGCAGCCAATACCGGATGGTTCGGGCGCTG 20688 36 100.0 30 .................................... TCGTCGTTGGACCATCCGCAAAAGTAATAG 20754 36 97.2 30 ......C............................. GCGACCGCATCCTGCCCGTAATACTTGTTC 20820 36 97.2 30 ......C............................. TGTCGGCCCCTGTCTTACTAGGCGACAGAC 20886 36 97.2 0 .................C.................. | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.6 30 AGTTTAGTCATTCAGAATTCGAGGTCCAGCCGCAAC # Left flank : ATGTATACACCCGGAACGGCAATCCGATGATCATCGACGTGCCTGACGAGCCCGGCGCCTATGTGCTGCGCTACTTCCTCGGGCAAGATCGGGTCGTGATCGCCGAACACCCGCTCGTCGTGCAGTAACGCCGATCAAATGCGGGGCGATCTGACGAAGGCCGCCTCGCAAGTCTGACCACAGTCCGCCCGCGCGCCCGCGACCACGGCGCTGTCTCCTTCCTCGCCTTTCAAGACGGCACGGAACTGCGTGGCAAGAGCGGACGATGCTTGAGACCTGATCAGGTTCAACCTTACGGCGCCGTTCTCCGATGTGCCGCCGCCAGATACGTCATTTCGCATCTCCACGGTCTCGTGATATGATCTCCCGGTCAGACCCAAGCCGTCGGGCCGCCCGCAAAAATCTAGAGAAACTGGGGATGTTTTGAGCCAAATGCGCCGGAATACCACACATAAAGACCGGGAATACCCTTGCAAAAACAAGAGCTTCCCCGGTGATCC # Right flank : CGATCCGAAACCACGTCAATCCTAAGCGCAGACGATCAGATATGGATCACCCGGTCATACGCGTCGAGCACGCTTTCATGCATCATCTCGCTCAAGGTCGGATGCGGGAAGACGGCCTCCATCAGGTCTTCCTCCGTGGTCTCTAGTTGACGGCCCACTACATAGCCTTGGATCAGTTCGGTCACCTCCGCACCGATCATATGAGCGCCGAGAAGTTCCCCCGTCTTGGCGTCAAAAACCGTTTTGATCATGCCCTCTTGTTCACCAAGTGCAATTGCTTTGCCGTTGCCAATGAAGGGGAAGCGGCCGACCTTGACGTCATAGCCGAGCTCCTTCGCCTTGGCCTCGGAATAGCCCACGCTGGCCACCTGCGGGTGGCAATAGGTGCAGCCCGCGATGCTTTCGGGTTTCACCGGATGGACCTTGTTTTTGCCCGCGATCAGCTCGGCGACCATCACGCCTTCATGGGAGGCTTTGTGGGCCAACCAAGGGGCACCCGC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGTCATTCAGAATTCGAGGTCCAGCCGCAAC # Alternate repeat : AGTTTACTCATTCAGAATTCGAGGTCCAGCCGCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //