Array 1 3806486-3807307 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP054353.1 Escherichia coli strain SCU-172 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   3806486	    29	  96.6	    32	............................A	AATACAGGACCAATATTTTGATATATATAATC	
   3806547	    29	 100.0	    32	.............................	GTGATTCTGGCAATACTGGCACTTCCGTTTTG	
   3806608	    29	 100.0	    32	.............................	GGCGGTTAACTGGTCCTGTGCGGATATGCGCT	
   3806669	    29	 100.0	    32	.............................	ATGTGGAAAGGCGAGCTGAGGGTGGCCTACGC	
   3806730	    29	 100.0	    32	.............................	GCTGAGGAAATTGCTAAACCCTCGCAGGATCC	
   3806791	    29	 100.0	    32	.............................	TTGCCGGTACAGCTCCAGCATTAATCCCCACC	
   3806852	    29	 100.0	    32	.............................	TTGCGACGTGGTGCGCGCTCGAGCACAACGTT	
   3806913	    29	 100.0	    32	.............................	ATGTAAACCCCTCGCGCATCGAGTCAAATGTC	
   3806974	    29	 100.0	    32	.............................	CCACCTCAGCCTGCGCGCCCGCTGAATATTCC	
   3807035	    29	  96.6	    32	...........T.................	GGACGCGTTCCATCAGGGCGGGTCCAGGGAAT	
   3807096	    29	 100.0	    32	.............................	CAGGCGGCGCAGTGGCGCATGAATCCGTTCGC	
   3807157	    29	 100.0	    32	.............................	GAGTTTGTGAATTTAACAGAATTCCGCGCCCG	
   3807218	    29	  96.6	    32	............................A	GCCAATTGCCATATATGCCATCGCCAGCAGCC	
   3807279	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACTCGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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