Array 1 2423363-2422827 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042169.1 Micrococcus sp. KBS0714 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2423362 36 100.0 36 .................................... GTCCTCGTGATCGTCTGGAACTCGGCGAAACTGATG 2423290 36 100.0 35 .................................... AGGTACACCTTCGGTTCATAGGAGACCGCGGGGCC 2423219 36 100.0 38 .................................... CCATGAGCACAGCTCCATCGGCCGGGCGGATCAGGGCT 2423145 36 100.0 34 .................................... CCGCCGCTGGTCGGGGAGACGATCGCGTAGGGGA 2423075 36 100.0 36 .................................... GTGTGATACCCCTGCCCGTTGGTGACCCATCCGAGG 2423003 36 100.0 35 .................................... GGGCGGACGCGGGCGCTCACCGCTGAGCAGAAGCG 2422932 36 100.0 35 .................................... GTGAGGATGTAGCCGGGGTCGTCATCCTGCTTGCC 2422861 34 88.9 0 .............C...A.-...........-.... | C [2422829] ========== ====== ====== ====== ==================================== ====================================== ================== 8 36 98.6 36 GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Left flank : AGCGTCGGCGGAGAGCAGTGCGTTGATCACGGTCTGCAGCAGGTGGCGCAGCAGGTCTGGGGAGGCCTCCCCGAGAGCTTCGCGCAGCAGGCGTTCAGGGTCGACAATGTGTGGAGCGGTCATCGTGGTGATGTCCTTTCGAGAGTGCTGTGGAAGGTTCGCTCGAAGGCTCCCACGGTGACCGCGTCCGTCTCGAAGATGGTCGTGGCCACCGGGGAGGGTTACACCACTATCCGGGACTCAACTCCCAAGACCCTGGCCACCGCCACCGTGGACCGGCTCCTGCACCACGCCCACGTGTGCCAGACCACCGGAGACTCCGTACGGATGACCCAGGCAATGGCCGGGAAGGGAGTCATGCCACTGAACTGATCCCATCACGGTGGCCAGCACCACCACCCAAACGGGCAAACCAGCTGGCCACCAGTGGGCAGTTCTGATGGCCACCAGCGGGAAGAAACACTGGCCGCCTATGGGCAGAACTCAATGGCCCTTGACAA # Right flank : TCCAGGTCCGAGGCGGGGTAGGGCTCAGGCCGTGTCCCTCCCTGGTCAATTCGCTCGACTCTGTCGAGGGCGAGGCACCTCGACGGGGTCGAATCACGCACGTGACGTCCGGCGCGTCGTCACGCGTTCGCGAGGTCCTGGGCGTGGCTCCATGGAGTGAGCATCAGTGGCGAATCTGCTGCCTCGGGGCCGAGGCTGAAGGCGAGTCGGGGAAATGCCATGCCCTGGGCCAATGCCCGGCGCATGGCATCACGTGCTGTCCCGCGTTGAAGTTCATCCGGCATCTCCCCTACCCGCATGCGCGACCGGAGCGCGGCCAGCTGCAGAGAGATTTCGGCGACGAGCGCGGTCTAGATCAACGAGGCCGTCTAACCCTCGGGAAGCAGTCGGCCCCGCCTCGCCCCTCACACCACCAGGGACAGGAACGCGCCGAGCGCGAAGCCGACCACGGTGAGCAGCCCGGCCTTCTCCCCGCCCTTCTCGCGGGCCTCGGGGATCAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 2427487-2428243 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042169.1 Micrococcus sp. KBS0714 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2427487 36 97.2 34 ...................C................ CGGAGGTCGTCTGGTTCTCCATGAGCAGCCCGTT 2427557 36 97.2 36 ...................C................ TGAGGGGGTGTCCGGGCGGCCCGGCCCGACGATCAC 2427629 36 97.2 36 ...................C................ ACCCATGATCTGTGTGGACGGGCCACCCTGAAGGCC 2427701 36 94.4 36 ...................C....G........... GCCGGAGACCTGGGCGGCCTTGGCCACGTCCTCGCG 2427773 36 100.0 38 .................................... CGGGCCGGGCCGGCGCGGAGCACACCCTGCGGGTCCGC 2427847 36 100.0 39 .................................... CGTCGTCACAGACCGCTGGGGCACCCGTGGCGCACACAC 2427922 36 100.0 37 .................................... CCGTCACCTCGTCCACGCACGCGTTCGCGATCACGAT 2427995 36 100.0 36 .................................... GTAGAGGGTGCCGGCCCGCTCCACGCTGTACTGCGT 2428067 36 100.0 33 .................................... CGGTGGCACGCACGACGTCCTGGGGTCCATCAA 2428136 36 100.0 36 .................................... TGTGCCGTGGTCGCCGGGTGCCGGGTGCCTGAACGC 2428208 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 11 36 98.7 36 GCCTCAACGAAGTCCGCTCTCCAAAGGAGCGGAGAC # Left flank : GCGTGCACGACATCGGCGCGGATCCTGCCCGTGGAGGCCTCGACCCATTCCTCGATCTTGGGCAGCCAGACATCGGTGACCTTCGGGCGGCTGGCTCCGGATCCAGGGGTCTGGCCGGCGTCGCGGGCCCGCACCAGCCGGGCCACGGTGTGATGGGAGCAACCGGCCAGCTCGGCGGCGCCCCGCAATGACTTGGTCAGGTCATAGGCACTGAGTATTTTCATGGTTTCTGCGGCATCCTTCATTCAGGGCCTCTTCCTCGCTGGATTCGATTCGACACCGATATCCAACCCGGGGAGGAGGCCCCCGCCGGCTCACGACGCGGCGGGCAACGAGCAACGCGGGCAAACCAGATGGCCAGCACCGGGCAGTTCCCGTGGCCATCACTGGGCAGTCCTCATGGCCGTCAGCGGGTCATTCCCTGGCCACCTATGGGCAGCTTTTCATGGCCGCTTACAGAGACTGGCGTGGACGTTCCGGGACGACTCGACGGCCATGCG # Right flank : CAGCACCTCAGATTACAGCCCCTTGACATGGGCAGACGCGACCTTCGGCGAGCCCTGGGCTCAAGAGGCGTCCGTGGAGCTCCATGCCTTTCGGCCTCGGCCCATGAACCGTGGGCTGACAAGCCCTTTTCTGATGCGACGGCTCGCCGGATTCCGGACATCGACGGAGCGCTCGCGAAGGTCCCTGGCTCGCTTCAGATGATGATGGGCCCGTCCACAGTAATCTCGCGTGATCGACCCAGAAAGCTGAACTGCTCTGCGCCAAGCGTGGCCGTCAGCCCGAGGTCGCAGACCAGCACGCTGTCCTCGCCCGGATCCAGCACCGCTTCGAGGGCTGCCTGGAGGGAGACGAACTGGGCGGGCAAGGCATCCACCACGAAGACTGAATATTGGACTCGATCTCCGTACCCTTCGAGGACGCGGGCCGCCCGGGATCTGCGGCGGTCGTCAGGAATGTCATAGGCGATGAGTCGCCTCCGGAGACGATCCCGGGCACTCAA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCTCCAAAGGAGCGGAGAC # Alternate repeat : GCCTCAACGAAGTCCGCTCCCCAAAGGAGCGGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //