Array 1 128333-126048 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFJX01000017.1 Klebsiella pneumoniae strain 071H5 CEPHYTEN98_S37_R1.fastq_(paired)_contig_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 128332 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 128271 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 128210 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 128149 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 128088 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 128027 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 127966 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 127905 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 127844 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 127783 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 127722 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 127661 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 127600 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 127539 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 127478 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 127417 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 127356 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 127294 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 127233 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 127172 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 127111 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 127050 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 126988 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 126927 29 100.0 32 ............................. AGGGTTTCGATTTTATCGGGATAGAAATGAAT 126866 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 126805 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 126744 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 126683 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 126622 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 126561 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 126500 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 126439 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 126378 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 126317 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 126256 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 126195 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 126134 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 126076 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //