Array 1 60318-61693 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTV010000019.1 Alicyclobacillus suci strain FSL-W10-0048 NODE_19_length_62153_cov_49.520659, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 60318 33 100.0 34 ................................. CATCCCTGCGGCCTTCGACATCGACACTGCAGTA 60385 33 100.0 34 ................................. AATACTTCCGCAATTATATTGTTATCCATGTTTA 60452 33 100.0 34 ................................. AGCCTAAGCACGAATCCTTTATCACACAAAGCAG 60519 33 100.0 34 ................................. AATATATGGATTTAAAGCAAATAACCTTTTTAGC 60586 33 100.0 33 ................................. AAAACTCAAAATCTCTCCATAAGAATCCATTAA 60652 33 100.0 34 ................................. TTTATATCCCATTCATATCCGAGTGCTATCATGC 60719 33 100.0 34 ................................. GACTTTAGGGATATGATCGAGATCGTGGAAGACG 60786 33 100.0 36 ................................. ATTTTGTACCTAAGAAAAGACCGAAGCCCTGTGAAA 60855 33 100.0 34 ................................. CCTAATGTGTCAACCTTGTCATGAAGATGCTCCA 60922 33 100.0 34 ................................. TCCTGCCGGCCTGCAGAGCATCGTTGTGGGAGAG 60989 33 100.0 34 ................................. ACTGTAGGGCAAACGGTCGCAGCGATGAGCGCAA 61056 33 100.0 35 ................................. TAGACACTATCTACATGAGTCACCAGGTAGCAAAA 61124 33 100.0 34 ................................. TATCATTGCGCCATCGCTCTGGATAGCAACTGGA 61191 33 100.0 34 ................................. CATCCCGTACACCATCAATGGTGTGGCGGATAAC 61258 33 100.0 34 ................................. ACTTTAATGAGTAGGTAAGAAGCGGAAAAGCTTG 61325 33 100.0 34 ................................. GATCCATCATATTTGTACTGTTCAATACTTGTTA 61392 33 100.0 34 ................................. ACCATCTTTATACGTGAAGGTCTTAGGCAGTTGA 61459 33 100.0 34 ................................. TCAATTGAGTGTGTAAACGCTCTTAATAAACTTA 61526 33 100.0 35 ................................. ACAAATTTATACTTGACATTTTATAAAAGTTGTGA 61594 33 100.0 34 ................................. TTCAAAATCAAGCTCATCCATTGGCTCAGTCGGA 61661 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 21 33 100.0 34 GTCGCATCCCGCGAGGGATGCGTGGATTGAAAT # Left flank : TTGGATGAGTATCCACCTTTTATGTGGAAGTAGGTGAGGGAGTGCTGGTTTTGATTACTTATGATGTAAGCACAGTCAGTAGAGAAGGACAAAAACGGCTGAGGAGGGTATCGAAGGAATGTCAGAATTACGGTCAGCGTGTTCAAAATTCAGTGTTCGAATGTGTTGTTGATGCCACGCAATACGCAGCTTTAAAGTTAAAGTTGATTGACCTTATTGATGAGGAGCAGGATAGCCTTCGATTTTATCAATTGGGCAATAACTATAAAAGCAAGGTAGAGCATGTTGGAATCAAAGAGTCGGTCGATCTGGATGGTCCTTTAATTTGGTAGTGCGAATGTGGAGCGCACATGATTTAGAGAGGGCATTCGCACCATGAAAATGGATTATATTGGTTTGTCATTAGGGTTTATGTGAATTTTACTTTAGGAGTCTATTGGATTTGTTTGATTTTTTATGAACAAAATGTTGGTTTAGTTGCGTTTTTATTGAAAAATGCC # Right flank : CTCGACAGTGGGTATTGGCGGTTTTACTTCACCGGTCGCATCCCGCGAGGGAGTAAGCGTAAAACGCAGCACACCTCGTAAGGCTACACTCTGGGTGGGATAATCTCCTCAAATGAAACTGAGGAGAGTGAGGTACATGTCAAGAACCGAGCTACGTGAAGAATGGGAGAGTCGCCTCACCGAGTTTGAGTCCAGTGGGCAAACGGCTACAGTCTGGTGTGCGGTGCACGGGATCAATATTCATCGCTTTCGCTACTGGTCCAGCAAGCTTCGAGGGAATCGACGAAAGCCTTCAAATGGAGAGGTTCGTTGGCTTTCAGTGGAGATGGAATCAGTCATTAAACCGAGCAGTAACGAAGCGCTCACTGTTCAGGTTGGTCAAGCCAGGATTGAAGTGTCTGAGGGCTTCAACACCAAACTGTTCATACAGGTCGTTCAGGCTTTGGCAGATGCTCATCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCGAGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.60,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30625-31320 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTV010000036.1 Alicyclobacillus suci strain FSL-W10-0048 NODE_36_length_31529_cov_57.300223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 30625 30 100.0 36 .............................. ACAGGATACAAGACTGATAAAAAAGGCAACATCACA 30691 30 100.0 37 .............................. AGTCAACGGGTTACGCCTGGCAGGAGCATCGATATGG 30758 30 100.0 36 .............................. GGGCTTGAACCTGGTCTTCTCGGTCATGCGTATTTG 30824 30 100.0 36 .............................. AAGCAAAAAAGCTGGGTAAAACGTGGGCGATAGATG 30890 30 100.0 37 .............................. AAGATGGCAAAAAAACGAGCTCTAATTGACGCTGTGC 30957 30 100.0 37 .............................. ATACATCCCTCCAAGAAGTGAATATCTACGACTTGTA 31024 30 100.0 36 .............................. GCATATGCGTAAAGGGGCCGACAAAGGTACATTATG 31090 30 100.0 35 .............................. AAGGTCTCAATATTTTCACGTAACCGACGAACACG 31155 30 100.0 38 .............................. ACACCTTATGACGGCATGATGCTATATTCATTTGACGA 31223 30 100.0 38 .............................. TCTCATCTTCGGTATCTCATTCGGCTTCACCACTGTCA 31291 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 100.0 37 GTTGATAGCCTGCCTTAAAGGGATCGAAAC # Left flank : CCGTTTGCGGCACGTTGGTAACGGAGGTGGCGCAATGTTTGTCATTGTCATGTACGACGTTCACGTCAAGCGTGTTGCCAAGGTCTTAAAGACGTGTCGGAGATATCTCTATTGGGTGCAAAACTCCGTACTTGAAGGAGAGATTTCCAAGGCTGATTTTGCAGCTCTGAAGCGAGAGCTTGCTGAAATTATTTCACCCGATCACGACTCAGTCCTCTTCTACACTTTCCGTACGACGCGGTATACGAGTCGTGAGAGCATTGGCATGCAAAAGGGAGGGGAAGAATCGGTTCCTGTGAGCCTGACTAATGCGGGCCCTGGCCGGTCTAACATGTCGTCGGTCATGGGTCTCGTCAAAATGCCGGGGGATCGACGACAGGCCCCTATACATCGATTTGCCAATTACAGCGCTGGTGTTTACCAATTTGCTAGCTGACTGATAAGATGGTGATGGATTGGACAGTGCAGTTGAATTTGGCGTGTTGATGCGGTGGAAGTGG # Right flank : GCGGGTTATCCTGGTCGTGCCGTCGCCGGTCTCCCCAGTTGATAGCCTGTTTTTCGCAAGTAAAAAGTGCAGAGAAACGCTGCGGATTTGTGCATAGGCACCGCAACACTGAAGATTACGACGACTTCGTTCCAGATAAGGCATGTTTCAGGCGGTAGCTCTCGCCGGTGAACGCCAAAACGTGGGCGTGGTGGACGAGTCGGTCCACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGCCTGCCTTAAAGGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 9733-6325 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTV010000052.1 Alicyclobacillus suci strain FSL-W10-0048 NODE_52_length_22016_cov_43.771547, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 9732 36 100.0 34 .................................... TATGACGATAAGTAACGCTTCCTGCTGATTTTCG 9662 36 100.0 37 .................................... CGTATATCACTGGTATGCCTTCCCATACTTCATTTTC 9589 36 100.0 37 .................................... GTCCAAACAGGTGCCACACTCACATTCACCCGTATGC 9516 36 100.0 37 .................................... GGCTGTGCAGCTGATAGCAGACGAGTTTGAGGAGGGT 9443 36 100.0 36 .................................... CCACCAATTCAGCGATGGGTACACCATAGAATTTTG 9371 36 100.0 34 .................................... GGGAGAGTTAGTGCATATCCGCCAGCTCGCGGGA 9301 36 100.0 35 .................................... CTAGGGGTAGGTTTGTAGTCGCCCTCGTCGAAGGT 9230 36 100.0 34 .................................... CTAACGATGAATATGTTAGGTCTTCTGAATTCCG 9160 36 100.0 36 .................................... CCTTTGTGCGCCGCTGTGCAATTACTGGGTCTTTCC 9088 36 100.0 35 .................................... TGTTGCGTGAATTTGGCGGTATGAGGCAATTAACA 9017 36 100.0 38 .................................... GAAATATGGAATATCATTTGATTCTCAATTGAGTGTGT 8943 36 100.0 36 .................................... AAAAACTAAATACGCGTCATCTAATTCCAGTATGTA 8871 36 100.0 37 .................................... GCCGACAAGCTATTTATGACCGAGCTATCCAGCATGA 8798 36 100.0 35 .................................... TGGGTGGCTGTATTGATACCACTACAGTAGTACCT 8727 36 100.0 35 .................................... CCAACGCCAGGGGATGAGTCTGGCGTGTGCATACC 8656 36 100.0 36 .................................... CCTTCCCATCCCGTCGCTCTTGAATGTCGATATGCA 8584 36 100.0 34 .................................... ATAGCAAAATCGGAAGCTGCATAATTCGTATAAC 8514 36 100.0 36 .................................... CATTCTCTCATGGAAATTCCCTTAAAATCGCTCTTT 8442 36 100.0 35 .................................... TTATCGTACACAACAAATCTTTGTTCCTTCTTAAA 8371 36 100.0 36 .................................... GGAGCGTTTACAAGAATGTGAGGTGCAGCTAACAGA 8299 36 100.0 34 .................................... AAGTCCTAAATCCATTTTATTCATCCTTTTCAAT 8229 36 100.0 39 .................................... ATGTAAATCCCTTTTGTTTCCTTTTTCGTCAGTAAGAAC 8154 36 100.0 35 .................................... TTAGTTTCGTCATGAAGCCATTCGCATCTTCAAAA 8083 36 100.0 35 .................................... GTCGTCAATGACGTAGTAATAAATATCGTCTTCAC 8012 36 100.0 37 .................................... GTAACTTTAATTTTCATTTGTTATTCCTCCAATGGGT 7939 36 100.0 35 .................................... CAAGGCAATGATGGCTAACTTTTGGGTACCGGAAG 7868 36 100.0 37 .................................... TTGACTACTCACCTTTGACCACCGCCACAAACGCTTG 7795 36 100.0 34 .................................... CCAAACTTTTATCCGTAAAAGTTTACCAAAATAA 7725 36 100.0 37 .................................... GCATTGTGCATGGCGCTTTTGTCCTGATTATCGAGCG 7652 36 100.0 37 .................................... GGAGTAGTCGATAGTACAAAGTAGAAGAGCCTATCCA 7579 36 100.0 34 .................................... CTATGGTAGACATCATGTTCAACCCGAGTGCTTT 7509 36 100.0 34 .................................... TCTTCTAACACTCGGCAAATTTGTAGATAACTAT 7439 36 100.0 37 .................................... AATTGTTGACATTCACGACTACATCTAGATTTTTCGC 7366 36 100.0 35 .................................... AACATGCCATCGCCTGTATAAATAGATTCCCAACG 7295 36 100.0 36 .................................... TCTTGACAAGGGGTGATCGCATGCCGGTAGTTGAAT 7223 36 100.0 36 .................................... TTTCCTGTTGATTGCGAACTGATAACTCTAACACGG 7151 36 100.0 37 .................................... TCCGCAAGGTCTTTGAGGATCTGCTTCGATGTGGCGT 7078 36 100.0 35 .................................... TTTTGCTATTGCTTCATCTGGAACGAATGTATACG 7007 36 100.0 34 .................................... GCAGGTTGCGGTGCAGGCTGTAGATCGGGCTGCA 6937 36 100.0 35 .................................... TATGACCATCCTCCTCAGCGTTTCCGCAGACCTTG 6866 36 100.0 38 .................................... AACATTAAATTTTTCTATTTCATCCAACAAATTCAAGC 6792 36 100.0 37 .................................... CTTTATTGAACGTTTGTAGTTCGTTCGGAATGTTACC 6719 36 100.0 36 .................................... AGTTTGTGTCATGATCCATGCCGGTGATTTCATAGT 6647 36 100.0 35 .................................... GGGCAATATTCCACGAACGTATTTCTCGATAAATT 6576 36 100.0 36 .................................... AGCGTGGCATATGCAACCGAGTGACTGGCGTTAAAC 6504 36 100.0 36 .................................... TGTGTCGGGACACTCATGTGATAGCGGTCATTGCGG 6432 36 100.0 36 .................................... TACTGGCTGATACCCGTAATGGAGGCTGGGATCGTG 6360 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 48 36 100.0 36 GTGCCACTTCTCAGATCGCTCGCTCAGTGATCCGAC # Left flank : ATCCCGCAGGAGGCGGTTTGGGAAAGCTCTATCGGACTTTACTTATCTTATCCGTAGGCCCCCTAGCGGTTATTGAGGTTGCCTAGAGCATATGACTATCCAACTTGAGTGCCAACGTTTAGCGTAGCTCCCCCTCGACGGAATGACGTTCTTTCAGTCGTTTCAGTTCTAGTTCGTGAGTGCCGTACATTTCCGCTAAATGCCTTTGATCTACATTTAGGTCGGATTTCTCGGCGTAGCTCTTTCATTGATCGATTATCTCTGTCGCGAATCTCGTCATCGTATCGGTGAACCGCTTTTCTTGTTCTTCAAGCGCTTTGGTAAATCGTTCTTCGATGACTTTGGTGAACCTTGTTTCCTGCGCCTTAAATTTTTCATCCAGGTAGTTTTTCAATTCCTGATCCATGTCAGCACCTCGCAAACGTAACCTCGCAAACGTATTTTACTATGCTCAGTGATCCGACATTAAAAAAATAGCCATCATGACCCACTTCATGTCA # Right flank : GGCGGGCGCTCGCAGCCCTTGAACCACGCGGAGATCCAAGCCCATAAACGAGCACTTGATGTTTCCCGTCGATTTCATCTCGTTTCATTCTCGTTCTCTCCCGTCGTTTTCGCCGCGAATCCCTTGTCCCACCTATATTTCGAGCGCCTCCCAGGGTTTTCGCCCTGAACAGGCGCTCGAAAGGTCAGAACACTGAGCGAGCGTTCTTTTTGAGAAGCTCAACAGGCTTTGCCACCTGGAAAGTGGCCATTGGCACACCCGTTGAATAATCTGTCCTTTAGACAAGTTATATTTTACACGTTTTTGAAGTTCACATCAAATCCTCAAAACACCAATCCCTTCAAATCCAATGGTACGAAATCCCGTCCAATGCACGACATATTCCGCTCGGCAGCGTTCGCCTGCACAGTTCCAATCCTTGCAAAAATGACTTGATCCATCGACTGATGAATCACGTCCAAGAGCAATTGCTTCAACTCAGCCTCATCCTTTTCAGTGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCACTTCTCAGATCGCTCGCTCAGTGATCCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 2822-973 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTV010000106.1 Alicyclobacillus suci strain FSL-W10-0048 NODE_106_length_3188_cov_69.601165, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2821 32 87.9 34 .A...T.A.-....................... CCTGAAGCTGCTTTCGACGTAATGTCCTTCACCG 2755 33 100.0 34 ................................. ACGAGTTATGGCTTTGACGCGGTAGCTGGTATCC 2688 33 100.0 34 ................................. TGACATCATGCTTACGCAGGGCTTGGCGGCTCGG 2621 33 100.0 36 ................................. TCCGTCACGCCATACCTCACCAACGCCCCATCCTTC 2552 33 100.0 34 ................................. ATACCAGCAGGAGAGCGCCCGAACAGCTTTGTAA 2485 33 100.0 34 ................................. ATAAATGGGGAGGTTTATCGATGAAAATCACAGA 2418 33 100.0 34 ................................. AATATCAGTGCGTGCATCTTGTCGTATTGATTGC 2351 33 100.0 34 ................................. ATCGGCGAGCACTGGCGAAATATTAGCGAGGACG 2284 33 100.0 35 ................................. ACATTGGACGCAGCCGCTAATGTACATAATCACAA 2216 33 100.0 35 ................................. ATGAAGAACACGGCGACATATTGGACGCCTGGAAA 2148 33 100.0 34 ................................. CGCTACTCTGTTGAGCCATGGTCTGTCCAGTTGG 2081 33 100.0 34 ................................. ACCGAAATTAGCCGAACTCGAAGTGAAGCTATCC 2014 33 100.0 34 ................................. AGTACCGTCTGCTAATTCGTTGATACGATCCAAA 1947 33 100.0 34 ................................. TGATGTTGGATACTGGGCATCGGGATTACTATAA 1880 33 100.0 35 ................................. GCCAAAAGGGGTATCAAATTGTTGATGATGAATCA 1812 33 100.0 34 ................................. AGCACTGCACTAGTTAACTAGTTATTGTAATTAA 1745 33 100.0 34 ................................. AGTGGGATAACGCTGATAGCGCGCCTATCGATGA 1678 33 100.0 34 ................................. AGGAACACTTTAATGCGATTATCGGCATCTTGCA 1611 33 100.0 34 ................................. ATCCCTCCGTTTCTCAGACGCCGGTAAGTCACAT 1544 33 100.0 35 ................................. AATCCGAGTAAATGTATCGTTTGCGGAGCGGGTGC 1476 33 100.0 34 ................................. CGTAGCAGGATCGCCCGGTGTGAAGAACCCTGAG 1409 33 100.0 35 ................................. GTCGATTGCGTTGGGGATTCGATTAAGCCGCGCGT 1341 33 100.0 34 ................................. ATCAATCTAAAGTTAATGCAATTCTATACTTTGA 1274 33 100.0 34 ................................. TTGACGACACTATTCTGCGACCTCCTCGACTGTC 1207 33 100.0 34 ................................. TCCTCGCACACACTCGCCGGACGGCTTCGTCCAC 1140 33 100.0 34 ................................. TAGCATGATCGTCCCACTCGCGGATGAATGGATG 1073 33 100.0 35 ................................. AACAAAGGGACGTCAGCGTATTACGAAGCGATCCT 1005 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 28 33 99.6 34 GTCGCATCCCGCGAGGGATGCGTGGATTGAAAT # Left flank : GATCGATAACAACCGCGGTGAACGTTCCATTAAGCCATTTGTGATCGGGAGAAAGAACTTCCTGTTCAGCAATACGCCGCGCGGAGCTAGAGCGAGCGCCATCACATACAGTATCGTGGAAACTGCAAAAGAGAATGGACTCGACCCGTTTCAATATCTGTGCTATCTGTTCGAGCAACTACCAAACGTCCCCGACGATGAATCTGACTCGTTGGCCGCGCTGCTGCCTTGGGCTGGGAACTTACCGGACGAAGTGCGACATTCAAGGAGAAAGACTCCATAACACGACAGTAGTCCCCGCCGTAACCGGTGGGGATTTCTGATTATAATGACGACGAATGACCTACCTTCAATGTGTCCTGCGTT # Right flank : TTCGATCCACGACCACCTTTGACCACTCGGTAACGACCTTTGAACCGCCAAAACTCAGTGTATCCTTTACCAACGACCGACTTAAGACTAACTGTCGTCGTCGAGGTCATCGACAAACCTCACAGATATGGCTTTTTCGTCATTGTCACCGAGTAGATCATGCTTGAGTTTGAGGGCTTGGCGTATTTCCGATGCAGTGCCTGTCAGCAGGTCAACCATCGGCTTGGCCTCCATGAAGACCCCGCCGCCTTCGACGTTTCTCATCAACCAGGACTTAGCTCCCTGATGAAGTTCGAAGTTACTCTGGATGGTTGCGTCGAGCATCTGCAAGTCAGTCAGACGCTTATCCACCGCATTCTGCATGATGGTTTGAGACTCTTCATAGTAACGTTTGGCAGCTTCCTCTTTCGGCGCGAAGTGCGTATCAAAGTGACGCCGCACGCTCGCCTTAGAGATGGACACGTCATGCTTGGCAAGGAAATCCACGACCTGCTGTAGGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCGAGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.80,-7.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //