Array 1 125223-123208 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEOX01000001.1 Pediococcus acidilactici strain FAM1430 FAM1430_scf0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 125222 36 100.0 30 .................................... TCCGAGCGTAATGACGTTCCCTAGAACTGA 125156 36 100.0 29 .................................... CATTGCGGTAGTTGTCCGACCAATGTCGA 125091 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 125025 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 124959 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 124893 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 124827 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 124761 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 124695 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 124629 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 124563 36 100.0 30 .................................... GGAACCAGCTTCGTAACACCCGGGCGAATG 124497 36 100.0 30 .................................... ATTCGTATCCTAGATGGTTTGGACGCTTCA 124431 36 100.0 30 .................................... CCGGTAAACTGCTAAGGTCGCTTAAACATA 124365 36 100.0 30 .................................... ATTAAGGTAGCCCTGCTGAAAATAGACAAG 124299 36 100.0 30 .................................... TAGATTCTATTCAGCCATTAATCGACGCTT 124233 36 100.0 30 .................................... CTTTCCCTAATAAATAATCTACAGAAACGT 124167 36 100.0 30 .................................... GTGATTGCCAGCGACTTCCCAACAACGCCA 124101 36 100.0 30 .................................... TGTAAAATCTAAAACTGTTAATCTCGTGTA 124035 36 100.0 30 .................................... AATGGGACAAGTCAAACCATGGTGCTTATC 123969 36 100.0 30 .................................... GCCGTTAAGCTCAGAAAGAATAACTAAATT 123903 36 97.2 30 ...................C................ TAAATTACACGTTCATCATTAACAACATTA 123837 36 100.0 30 .................................... GTGGACTTACGACACTGCCCATGAAGTTGT 123771 36 100.0 30 .................................... TACTTACTCGGTAAAACAGATATCGAAACC 123705 36 100.0 30 .................................... CTTATTATTAATTCATCAAGTAATTAAGCA 123639 36 100.0 30 .................................... TTTGACCCCAAAGTGCCCTCAAGCCTTGAT 123573 36 100.0 30 .................................... CCTAAATAGGTTATCATTGGTCGCGCGAAC 123507 36 100.0 30 .................................... TTGTAACGGATGTTACTCCGCAGGAAGGAG 123441 36 100.0 30 .................................... CAATGTTGTTGTAATGATATGTGTTCTATA 123375 36 97.2 30 ..........A......................... GCATTTGAGCAGTGAATTCCCCACAATACG 123309 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 123243 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //