Array 1 555961-557199 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJDD010000001.1 Enterocloster citroniae isolate MGYG-HGUT-00198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 555961 33 100.0 34 ................................. ATCATCACCTCATTCCATTTTTCCTCACATAGCT 556028 33 100.0 34 ................................. ACTTTGAAGCATAGGATACCCCTCAAGGTCACTG 556095 33 100.0 34 ................................. ACTTTGAAGCATAGGATACCCCTCAAGGTCACTG 556162 33 100.0 34 ................................. CATACAACTGTCAGGACTTTGTAAATATACACTC 556229 33 100.0 36 ................................. TTTGAGAGAATCAAGGAACGCCTGGGAGAGGATGAT 556298 33 100.0 33 ................................. ATGATAAGCATCTGGTCACGCGTATCAGTGAAG 556364 33 100.0 34 ................................. AATACACTGTAGTGGCGACCCCGAAGATTGTAAA 556431 33 100.0 35 ................................. TGGAAAGCCAGCCATTAATAAACCGGTTGACGCCT 556499 33 100.0 33 ................................. ATGGTTAAGAATTCGTCATAGTTAGAGCCTGTG 556565 33 100.0 36 ................................. CCCAATTGACAAATAGTAATTTCCCTTAATCCATTC 556634 33 100.0 34 ................................. GGAAATAATGATTATTGTCCGCTCATAAAAGGTG 556701 33 100.0 33 ................................. ATATAGTCCATGCCATCACTCCCCAGTGACCGC 556767 33 100.0 35 ................................. AACGAGTATCAAACACGCTACAGACGTGAAAAGTG 556835 33 100.0 34 ................................. CCTATACAGATTCAAAAGGGAAGCAGACGACTTG 556902 33 100.0 33 ................................. CTGCTTTTTAGAATAATTTAAGCAGTATGTTAA 556968 33 100.0 33 ................................. CATGGAAAAGAAGACTGCCGACACGAAAGCGGC 557034 33 100.0 34 ................................. CTTATATTATGCACAGTCCACACCTGATACAGTG 557101 33 100.0 34 ................................. TCTGCGCATGGCGGTTATAAGTCCACCCATGCCT 557168 32 81.8 0 ..............A.........C.-..T.GC | ========== ====== ====== ====== ================================= ==================================== ================== 19 33 99.0 34 GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT # Left flank : GTCCATATTCTGTAGGGAAGGTTAATGCTTATATCAATTCCTTGAAAGACTTGTTTTCTGAAACTTTAATTTGGACCTTATCTATCATTACGGAAACGAGAAGAACATTAAAACATAAAGATAGTGAAGAAATCAAAATTGTGGAAAACGATAAGCTGGAGAAATATCATTTAAGTGATTTTGATATCAGAAATTTAAAAAAATCTCTTTGCTCTCCTTAGAGGTTCAATTGTTAAGTGTATGTTTACATATTATGGGATTGGAATAAATATTGCTTTGGGGTACAAAACTGAAAGTTTGGATTAAATATTATCAGAAAAAGGGAATACAAGTATTATGGTGCGAATCCCAAGCAAACATAAAATGTCTAGGAGATTCGCATCAAAATAAAGCACATAATATTTGATTTCGAGAGAAGATGTAGTATAATATGAAAAGAGATTTGTGCATTGTGTATGAGGGTAAGTTGTATTTAATAGTAAATATCATGCATAATTGCA # Right flank : CAGACTTGAACTTGGTAATTTTTCAATTACGATCATACCAAAGGAAAAATGTCGGGGTGTATGAATTAATTTCATATACCTCGACATTTATTATAGAATCATCTTATCAATTTGAAAGTCACAAAAATCGAAATCCCCTCAGAACGCTCCATCACACTTCCTGTCTAAACATCACCCGCGAAGCGTGGGCTCCGCCCCGGTGGATCCTGTTGTGGGCTGTTTTGATCGTCACACTGTTAAAGCCATCTCTGGTGTTCCGGTTTGGAAAGATAAAATTTTTTGCACTGGAGGTTATTGTGACTCTCAGGCAATGACCTTTGCAAAAGGTGTGGGACAGTTTGGTAGTACGGATTTTAACAGGGTAGATCTGTCCCGGTTCCATAAAGTCCGGGTGTTCAAACTGGTTACGGTACCGTACGCTGAGGACACCGTCTGCCAGTTTCATGGAACGTCCCTCCCTATCCATATCCGTGATGCGCACGACCAGATCCGTATCCTCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 38391-37415 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJDD010000003.1 Enterocloster citroniae isolate MGYG-HGUT-00198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 38390 33 100.0 34 ................................. CTTGCGTATGACCGCTCTTGCTTTTTCAAGTTCC 38323 33 100.0 34 ................................. CATAGGAACGGCAATCGCAACTTATTTCGTGGTC 38256 33 100.0 35 ................................. ACGAATGATGAACTTAAGCTGCTGTGGTCTAATGT 38188 33 100.0 34 ................................. ACATTGACAATCACCAATATTAGTGATATACTAT 38121 33 100.0 33 ................................. TCAAAATTCGCTACAACAATCACGAATGGCAAC 38055 33 100.0 34 ................................. ATGTCTGAGGATCTGTATGCAAAGTTCTGGATAT 37988 33 100.0 33 ................................. TCTTAAATACTGTAAATCCTCTTTGGCTCTGGC 37922 33 100.0 34 ................................. ATACTCAAAATCGGCTTGCTGGCAGACAACCTCC 37855 33 100.0 34 ................................. ATCTCCATTGATAAAGGTGTCATTAAACAGCGCC 37788 33 100.0 35 ................................. TCTCAACAGGGCGCTATGGAAGAATATCTCCGCAT 37720 33 100.0 35 ................................. ATTATTAGCATGGGCAAAATAAGACCATGATTAAC 37652 33 100.0 34 ................................. ATCAATCCCGTTCATTCCCACTGCATCTGTGAAA 37585 33 100.0 35 ................................. CAGTTAATTTCAGAATGTTACCCAAATTATAAAGC 37517 33 93.9 35 ..................T...C.......... ATTAGAAATTAAAATCAGCATGCGGAATTCTGACC 37449 33 87.9 0 ............A...AA.........A..... | GT [37423] ========== ====== ====== ====== ================================= =================================== ================== 15 33 98.8 34 GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT # Left flank : CTCACTCGTGAGCGGAAGCCCGACCATACAGGATGGAAAGCTGGCCGGGGCGGTGACCCATGTGTTTGTGCAGGATGCCAGCCGGGGGTATGGGATTTTGATTGAGAATATGTTGGAGCATTGAGGGTGAGGGAGGATAGAGTGGGCATATAGGTGCTGTGATCCTGCGTTCTTGGCTCTTATAAGCCTTTGTCCACTCTATCTTATGGAGTAAAAATTTTTGGTGTTTAGACGAAGTAGTGAGCGGATAGAAGAAGAGATGTAAGGGGAGCAAGATTTTGAACCATAATTTTGGTATACAAATACTTGATAATGTAAGTTACTATATTGGTGCGAATGCCAAGTGCACATGAAAAGCATAGGAGATTCGCACTTGGTTTTTAAGAAAAATTTGAGAAAAGAGAATAATTTAGATATCATGGGTTGTAAAATGATTAAGAGAGTTGTATGATTTGTATAGAATATGTCTTGTATAAAAAAGAAAATTAGACATATTTGCA # Right flank : CCATTGTAATATTGATGTCGCTGCTCCCTAAACGGTCAGCCCCAGCATAGGTTAATTCAATCCGAATAAATTAAGTCATATAATATAAAAAATATTAAAACATCAGATGAAAGCACTATTCTGATAAACCCGACTATCCTGTTCTTCCAGCGTACCGAATAAGTGATCGACATGCAAAAGAAATCAAAGAAATCAAATCACCCCAATACAAAGACCACATAGCCTCCCTCCATTAATTATTCCAATACACCCATCTTCCCAAAATAACATCTCCAATTTTTCCCAAAAAACAAAAACATCACTTCTACAATAAAGAAAACCAAACACACTCCCATTCCAATAACCCAAAAGTAATCACACGTTCAAACATCATATGCCTCAATTATCCATCACACTAAAAAGCATTCAACGATCATATACGGATCCTTCACCTATGTGGCAATGGAACAAAAGAAATTTTTATTCAGAAGTGGCGCAGCCTGCCTCAGAATATCATATCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.90,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 24746-25502 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJDD010000017.1 Enterocloster citroniae isolate MGYG-HGUT-00198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 24746 32 100.0 34 ................................ GACAAAAAAACGGGACTTAGAGTAAAAGAACCCT 24812 32 100.0 34 ................................ CTCCAGGGTCTTATACAGCCTGTTCTTTGGCAGC 24878 32 100.0 35 ................................ CTCGGACATCAGCAAGTAGGCAGTTTCGCCCTCAG 24945 32 100.0 34 ................................ AAAGGTGACAGGCTATATAGACGAGGCTGCTAAA 25011 32 100.0 33 ................................ CCTATGTACTTGGCCCTGGCGGGGGCCTGTAAG 25076 32 100.0 33 ................................ TCTTCCTTCTGGGCTTTGCAACCTTCGCGATCA 25141 32 100.0 35 ................................ TATGTAGTACGTAGTAAGGGGGGCATTGGCATTAT 25208 32 100.0 34 ................................ CGTCAGGCCCGATCCGAAGCATCAAAGGAATACT 25274 32 96.9 35 .................A.............. CTCCTCTCTCCGGCTTGCCCCGGCCATTCATTAAG 25341 32 96.9 33 .................A.............. TATATAAAACGATAAAAACGATAATAATCGAAT 25406 32 100.0 33 ................................ TTCTTGACTTTACGCCCTTTTGGGCATATAATA A [25424] 25472 31 75.0 0 A.T.......-......A..A...G..A.T.. | ========== ====== ====== ====== ================================ =================================== ================== 12 32 97.4 34 GTCGTTCCCCTTGCGGGGACGTGGATTGAAAT # Left flank : TGCATATCCGCCATTTTTGTGGAAGTGAGGTCAGAGTTTGCTGGTATTGATTACATATGATGTGAATACAGAGACAGCAGGAGGAAAAGCGAGACTTAGAAAGGTTGCCAAGCAATGCGTTAACTACGGGCGGCGAGTTCAGAATTCGGTATTTGAGTGTATTATGGATAATACGCAGTGTCTGCATCTGAAGTCAATATTGACAGAAATTATAGATGAAGAGATCGACAGCCTGCGGTTCTATTATTTGGGAAATAAGTATAAAACAAAAGTAGAGCATATGGGGGTTGATAAGGGGATTGCGGCAGATGAGATATTGTTTTTGTAGTGCGAATGTGAAGCATACATGAAAAGTACGGGGGATTCGCACCGGAAAAAGTACACAAAAGGTGCTTGGTTTGGGAGGGAGAGGCGATGATTTTGCTGTGTGGTATTCAAAGAAATGTATAGATGATATAAAAGTGTGATTGTTTTGTGTTATGATATTGGATATATTTGCT # Right flank : TTGTAATATGACATCTATAAAAAGGTATATGGAAGATATTGATAGAGAAAGATATTAATAAAGAAAGATATAAATAAAGAAGTATCTTTGCAAAGGGATACCTCAAAAAGCGGGGAGTACAATATTTTCGGCCTAAGAATATCCTTGACAGATTGGAGACAGCAGTATTCGTCTGTTTGAAGTCATCTAAGATGATAAAATATGCAGCGATTATGGTATTTGGAGGAAAAATGGAACAGTTATCTATATTTGAGTGTATAAATGGAACAGAAGAAAATAGAACCCTTTCCACGGATGAATTGGCTGCAATTCATCCACGGATGGTTTCGTTATTTAGCGGTTGCGGCGGATTGGATTGGGGATTTAAAGAGGCTGGATATGATATTGTTTATGCAAATGATTTTGATAAGGATGCACAGAGAGTGTATGAGGCAAATTTTGGCGAGATGGACGAAAGAAGTATCCTCGATGTACCGGCAGAGGAAGTGCCGGACTGCGAT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:0, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTTGCGGGGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : NA //