Array 1 41286-42108 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVQ01000020.1 Cellulomonas hominis strain NBRC 16055 sequence020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41286 29 100.0 32 ............................. GAGGCCGAGCCTGGTCGCGGGGTCACCGACTC 41347 29 96.6 32 ............................T GACTGCCGCCACCAGCCGGTCGTAGGCAATCC 41408 29 100.0 32 ............................. GTCACGGACGCCGAGTTCGACGAAGCGCTGGA 41469 29 100.0 32 ............................. AAGATGAAGGAGCTCGGCATCTCGGCGTACGA 41530 29 100.0 33 ............................. GTCTCGCTCGGCGCGAAGTACGCATCCCGGGCA 41592 29 100.0 32 ............................. CCGATGGGCAACCTCTACCTCACCAAGGGCGA 41653 29 96.6 32 ....C........................ GCGGTCGCGTTCGGCTACCGGCCGACCCGCGC 41714 29 96.6 32 ...................A......... GTCGTCGACATCGCGACGCAGGCGAAGTACCG 41775 29 93.1 32 .......T.T................... TGCACCTGAACCAGGGTCAGTAGGGCGGCTGC 41836 29 100.0 32 ............................. TCGCCGCGGAGCCGTTGGCCTGCAGCGTCCAT 41897 29 96.6 32 .............A............... GTCAGACCCGCGATGAGCCCGACCCATCCGGC 41958 29 96.6 32 ..............C.............. GCGTAGGGCGTCATCGGCTTACCCGCAGACGA 42019 29 96.6 32 ............................T CCGCGGTCCGCCATCCCCGTGGTGTGCGACCA 42080 29 96.6 0 ............A................ | ========== ====== ====== ====== ============================= ================================= ================== 14 29 97.8 32 GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Left flank : GCGCCGTGTTCTGCGTCAACGACCTCGTGGCCGTCGGGGTGCAGCGGGAGATCCGCCGGCGCCGCCCCGAGCTGCTCGGCCGGACCGCCATCGTCGGGTACGACGACATCGAGATCGCCGCCGAGCTGGCGACGCCGCTGACCTCGGTGCGGCAGCCCGCGTACGAGGTGGGCTACCGGGCGGCCGATCTGCTGCTGTCCCGGGACGCCGACGGCAACCCCGTGCGGGACCACGTGGTGTTCCAGCCGGAGCTGGTGGTGCGGTCCTCGAGCGTGCTCGCGTGAGCGGTGCCCGCGCCCTGCACCGTGACGTCCCCTTAGTCCGAGCGGGCCTCTGCGTCGCCGGCGACGTCCGCGACGGTCGCAAAGCCGCTGGACGTGACCGCTGAGGCGTGGCCGCGCACCTCCGTCACCGGTGCGTCGCCGTGCTCATAGCCCTACCCCCGGCTGGGACTGAAGGAGAAGCGGCCAGGGCCGGGGTATCTTCGCTGGTCAGGATGT # Right flank : CTACGTGTGGGACTGGGAGACGGATGACCCCAGTCGCGCGCGTCATCGCGTCGGCGGCCCGTCGGTCAACTTCCGCGTTTGCGCGACCCCACCAGGACATCCACGCGACTCTGAGCTACGGTATAAGCAATAGCAGACGGAGCCTGACGATGCTTATGCCAGACGTGTGGTCCGCACTAGCCGAGAGCCACGAGATCCTGCCCACCGCCGACTCGAGCCTTCGGGCGGACGTGGTGCTGCGTGGGCCGGCGTTCCCTGCCACGCCCTACGACGTCAGAACGGTCTCGACCCTGCACCCGTCACGCGTCCGACGGTTCGCCGACCCTGCCGGCAGCACGCCGGAGGACCTGCCGCAGGTGCTGGTGATCACCGCGTCCGCGACGCCCGCAGCGGTCGATGCGGCACTGACGGCCCGCGTGTCCGTCCTCATCGCACCGGAGCACGGCCCGGTCAGCGGAACGCTGATCGACAGCGACGGCCGGTCCCACACCGTGGACGCA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 53382-56950 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVQ01000020.1 Cellulomonas hominis strain NBRC 16055 sequence020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 53382 29 100.0 32 ............................. GTGTGGTCCAAGGCGATCGGCCCGGCCCCGAA 53443 29 96.6 32 ............................G GGCTCGGGCACGGACGAGGCGACGCTGATCTC 53504 29 100.0 32 ............................. CGCCACGCCGCCGGCGACCTGGAGGCCGCTGA 53565 29 96.6 32 ............................G TCCGCGAACTTCTTCACCGCCAGCGTCGCGAG 53626 29 100.0 32 ............................. GCGTACGTCACCGAGCCACCAGGGGGGATCGG 53687 29 100.0 32 ............................. TACTGGGCCGTCGCGGGCGCCGGGAACGGCGA 53748 29 96.6 32 ............................G GGTAGGGCAGGCCGCTCGTCATGCGGCCGCCG 53809 29 96.6 32 ............................G GCCGGGTGCGCGTGCGGGTGCCTCACGAAGCC 53870 29 100.0 32 ............................. GTGCCGGACTTCCCGAGGGGGTGACGGGTTGC 53931 29 96.6 32 ............................G CCGGGTCGAGCGTGCGGACGTACCCGGGGTTC 53992 29 100.0 32 ............................. CTGCTGATCCCGGCGGCGGAGAAGGCCGGGGA 54053 29 100.0 32 ............................. GCATCCGCTCGCCCACCGAGTCCTCACCCGGC 54114 29 100.0 32 ............................. GGCGTGCGCGTCGAGGGGGTGGAGTCGTGATG 54175 29 96.6 32 ............................G GCGGGGGGTCCCTCGGGGGGGTACGGAAGCCT 54236 29 100.0 32 ............................. CGGGACGCAGGGTTGAACACCGCAGCCGTGAA 54297 29 96.6 32 ............................G GCGCTCGGGGACATCCTGGGTGACCTCCTGTG 54358 29 96.6 32 ............................G CCGCTCGATCTCCTTCGTCGCCATCGACGTGA 54419 29 100.0 32 ............................. CAGCGGCTGGCCGCCGCTGGTGAGACGCCCGT 54480 29 100.0 32 ............................. ATGGGCCTCGTGTCGCAGGCTACCGCGGGCCG 54541 29 100.0 32 ............................. TCGCGAAGCGACTCACGAACTGAGGAGAGCCA 54602 29 100.0 32 ............................. TGGGCCTGCGCCTCCTTCGACTGCGGGGTGAG 54663 29 96.6 32 ............................G TCGATCTCCGGGCCGCCCTGCACCTGCGACAA 54724 29 100.0 32 ............................. GTGAAGGACTACGGCGCGAAGGGCGACGGGGC 54785 29 100.0 32 ............................. TCCCCGCCGACGTACACGACGCCATCGAGGTC 54846 29 100.0 32 ............................. TGCTCAAGGTCGCCCTTCAGGTTGTCCATCTT 54907 29 100.0 32 ............................. CGGCGCCTGATCGCGGCGCTAGTGCCGCAGAC 54968 29 100.0 32 ............................. AGGCCCCGCCCGATGAACGGGTGCCCCTCCGG 55029 29 96.6 32 ............................G TACCTGATCCTGGCGAACATCGGACTCACGTC 55090 29 100.0 32 ............................. AACTACATCGTCACGGGCAACGACTTCACGAA 55151 29 100.0 32 ............................. CCCGCCGGCACCGTGATCGTCTGGGTGACGAT 55212 29 100.0 32 ............................. GCGCCCAGCAGGCCAACGAGATCGACCAGCTC 55273 29 100.0 32 ............................. GTGATCGCGTGGGCGTCGGGCCACACGCACAC 55334 29 100.0 32 ............................. TCCTGCAGGCGCTGGCCCACCGACGCGAGCTC 55395 29 100.0 32 ............................. ACGCTCGCGACCGGGGAGTACATCGACATCGC 55456 29 96.6 32 ............................G GTGCGCGTCGGCTCGGTCGCGCCCTTGAGGTC 55517 29 100.0 32 ............................. GTGTTGATCCGGTCCTCGATCATCGCCAGGTC 55578 29 100.0 33 ............................. CGCCGACTCCGCGCTCACAGGTTGAGCTCCCAC 55640 29 100.0 32 ............................. AGCCTCGCATGGGCAGCGGCGAACCCGTCCAA 55701 29 100.0 32 ............................. CCTTTCACCCGGAAGGACTCCGTCCGCGGTTC 55762 29 100.0 32 ............................. CTCGTGACGGTCCGCGCGGAGGAGCGCATCGC 55823 29 100.0 32 ............................. ACCGCGAGGAACTTCAGCTCGCGGCCGTTCAG 55884 29 100.0 32 ............................. TGCTGCGCGGTCTCGATGAACCGGTCACGGGT 55945 29 100.0 32 ............................. TTGGGTCGCACGGTGACCGCGAGTTCGCCCGG 56006 29 100.0 32 ............................. CCGGTCACCTCGCTCAACGCCGGGAAGATCAC 56067 29 100.0 32 ............................. TGGTCCATCTGCCCGAGGAACGTGTCGTACGT 56128 29 100.0 32 ............................. GTCTTCACCGCCAGCACGGCGACGCCGGTCAG 56189 29 100.0 32 ............................. GTCGGTGCGGTCATCGCCCCGTACGCGGGAGT 56250 29 100.0 32 ............................. GACGCCGAGATGCCCACCGGCAGCAGTCGGCG 56311 29 100.0 32 ............................. CTCGGGGCGATCTCGATCGACCGGGTCCGGGT 56372 29 100.0 32 ............................. GACGCCGAGATGCCCACCGGCAGCAGTCGGCG 56433 29 96.6 32 ............................G GCATGAGCGTCGTCAAGTGGATCCTGCTGGGC 56494 29 100.0 32 ............................. CTGGCCAAGCTGCGCGCCCTGTTCACGAAGAA 56555 29 100.0 32 ............................. CGAAAATCGTCGCCATCGCCGCGTTGCGCTGC 56616 29 100.0 32 ............................. AGCGACAGCGAAGTGCTCGTTGCGGGCACTCC 56677 29 100.0 32 ............................. TCGGACGTGCGCAGATCGGCGTGCGAGCCGCG 56738 29 100.0 32 ............................. GTCGTGGTGCCGGGGCCATCTGTCCAGCATCG 56799 29 100.0 33 ............................. CCGAACCCGGACCCGAGCACACCGTTGCCGGCG 56861 29 100.0 32 ............................. TCCCTGGTCCCCGCGAAGACCCTCCCGGTCAC 56922 29 93.1 0 ......................G.....G | ========== ====== ====== ====== ============================= ================================= ================== 59 29 99.2 32 GTCGTCTCCCCGCGTGCGGGGATGAGCCC # Left flank : GCCGGTGGCACGTCCTACGCGGAGCCGGACTGGTGATCGTCCTCGTGCTGACCGCCTGCCCGGAGGGCCTGCGCGGGCACCTCACCCGCTGGCTGATCGAGGTCTCCGCCGGGGTCTTCGTCGGGAAGGTCAGCACCCGCGTGCGTGACGAGCTCTGGGACCGCGTGGTCGAGCTGTCCGGCCGCGGCCGCGCGGTCATGGCGCACACCGCCCGCACCGAGCAGGGGTTCGCCCTCCGCAGCCACGGGCACCACTGGGAGCCGGTCGACGTCGAAGGGCTCACGCTGATGCTCCGGCCGCACGGGGCGGAGTCGGCCGACGCGCCGGCACCGGCCGCGGGGTGGAGCAACGCCGGGCGGCGTCGGCGGATCGGACGGTAGCGGCACAGGTTCATCAGCGCTGATCGTCGCGCCCAGCGGCGGGCGCGACAGCCCTCTGCGAGGGTGCGCGGAGTGAAGTGAAAACGCACGTCGAGCGGGTATCGTCACAGGTCAGGAAGT # Right flank : GGACGGGAACCCCGTGCGGGACCACGTGGTGTTCCAGCCGGAGCTGGTGGTGCGGTCCTCGAGCGTGCTCGCGTGAGCGGTCGCGTGCGACCGGCCGGGTGAAGCGGGGCCTGCACTCGGCGCTCCGGTGTCACCCGCACCGCCCCTCCGCCGTCCCCCGTTCGGGTCGTTCCGCCTCTTAACCGGTTTATCACCCGCCCCAGCGCCGATCGGAACGGCGGAGCGCCGCCGCACGAGCGGTGCCGGAGCCCAAGGAGCGGGTCGATGACGACGGTGGCGGACGACAGGCGCGGAACACGGGTGGGCGCCAGGGTGGCCGGGCTCGGCTTCGCCGCGAAGATCCTGCTCACGGTCGCGATCGCGGTCCTCGCGACCGTCGTGGTGGGCCTCGTGTCCGTGTCCTCGGTCCGGCAGATGGCCGACGTCTCGCACCGGATGTACGACGAGGACGTCCAGGGCACCGCCCTCGCCGGGGAGATGCGGTTCCAGATGGTCACCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCTCCCCGCGTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [4-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //